Citation Impact
Citing Papers
Prokka: rapid prokaryotic genome annotation
2014 Standout
STAR: ultrafast universal RNA-seq aligner
2012 Standout
Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity
2013 Standout
High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries
2018 Standout
Ly6Chi Monocytes Provide a Link between Antibiotic-Induced Changes in Gut Microbiota and Adult Hippocampal Neurogenesis
2016
The effects of antibiotics on the microbiome throughout development and alternative approaches for therapeutic modulation
2016
Discovery of archaeal fusexins homologous to eukaryotic HAP2/GCS1 gamete fusion proteins
2022 StandoutNobel
Pathogenicity islands: a molecular toolbox for bacterial virulence
2006
Plasticity of TH17 cells in Peyer's patches is responsible for the induction of T cell–dependent IgA responses
2013
New concepts in the generation and functions of IgA
2012
Interactions between the microbiota, immune and nervous systems in health and disease
2017 Standout
Pseudomonas aeruginosa cleaves the decoding center of Caenorhabditis elegans ribosomes
2020 StandoutNobel
The microbiota in adaptive immune homeostasis and disease
2016 StandoutNature
Computational methods for predicting genomic islands in microbial genomes
2016
The dynamic genetic repertoire of microbial communities
2008
Dysbiosis and the immune system
2017
Recognition of microorganisms and activation of the immune response
2007 StandoutNature
The oral microbiome in health and disease
2012 Standout
Host-bacterial coevolution and the search for new drug targets
2008
The automatic annotation of bacterial genomes
2012
Type I interferons in infectious disease
2015 Standout
Complete nitrification by Nitrospira bacteria
2015 StandoutNature
Structure-guided mutagenesis of a mucin-selective metalloprotease from Akkermansia muciniphila alters substrate preferences
2022 StandoutNobel
Interaction between microbiota and immunity in health and disease
2020 Standout
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
2013 Standout
Role of the Microbiota in Immunity and Inflammation
2014 Standout
Molecular and Genetic Properties of Tumors Associated with Local Immune Cytolytic Activity
2015 Standout
Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson’s Disease
2016 Standout
Pseudomonas Genome Database: facilitating user-friendly, comprehensive comparisons of microbial genomes
2008
Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomes
2010
Genome-Wide Identification of Pseudomonas aeruginosa Virulence-Related Genes Using a Caenorhabditis elegans Infection Model
2012
Acute appendicitis: modern understanding of pathogenesis, diagnosis, and management
2015 Standout
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
2018 Standout
progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
2010 Standout
Diversification of memory B cells drives the continuous adaptation of secretory antibodies to gut microbiota
2015
Intestinal epithelial cells: regulators of barrier function and immune homeostasis
2014 Standout
Microbiota Modulate Behavioral and Physiological Abnormalities Associated with Neurodevelopmental Disorders
2013 Standout
Resurrection of endogenous retroviruses in antibody-deficient mice
2012 Nature
Gut microbiota, metabolites and host immunity
2016 Standout
The gut microbiota — masters of host development and physiology
2013 Standout
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
2013 Standout
Mind-altering microorganisms: the impact of the gut microbiota on brain and behaviour
2012 Standout
NCBI prokaryotic genome annotation pipeline
2016 Standout
Voices from within: gut microbes and the CNS
2012
Revisiting STAT3 signalling in cancer: new and unexpected biological functions
2014 Standout
Crossing the Line: Selection and Evolution of Virulence Traits
2006
Inflammation, metaflammation and immunometabolic disorders
2017 StandoutNature
The reach of the genome signature in prokaryotes.
2006
Prokaryote Genome Fluidity: Toward a System Approach of the Mobilome
2011
NF-κB, inflammation, immunity and cancer: coming of age
2018 Standout
Inflammation in obesity, diabetes, and related disorders
2022 Standout
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
2015 Standout
The gut microbiota shapes intestinal immune responses during health and disease
2009 Standout
The human microbiome: at the interface of health and disease
2012 Standout
B cells promote inflammation in obesity and type 2 diabetes through regulation of T-cell function and an inflammatory cytokine profile
2013
Enhanced SARS-CoV-2 neutralization by dimeric IgA
2020 StandoutNobel
PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes
2010 Standout
Shifting the genomic gold standard for the prokaryotic species definition
2009 Standout
Easyfig: a genome comparison visualizer
2011 Standout
Interactions Between the Microbiota and the Immune System
2012 StandoutScience
Loss of the Protein Tyrosine Phosphatase PTPN22 Reduces Mannan-Induced Autoimmune Arthritis in SKG Mice
2016 StandoutNobel
Succession of microbial consortia in the developing infant gut microbiome
2010 Standout
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
2014 Standout
Microbial diversity in the deep sea and the underexplored “rare biosphere”
2006 Standout
Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community
2010
Genomic Islands and the Ecology and Evolution of Prochlorococcus
2006 Science
The Inflammasomes: Guardians of the Body
2009 Standout
Innate immune signalling at the intestinal epithelium in homeostasis and disease
2012
Microbiota, Disease, and Back to Health: A Metastable Journey
2012
Identification of simple arylfluorosulfates as potent agents against resistant bacteria
2021 StandoutNobel
Role of innate and adaptive immunity in obesity-associated metabolic disease
2017
Microbes and Cancer
2017
Plastic and Human Health: A Micro Issue?
2017 Standout
Host-Gut Microbiota Metabolic Interactions
2012 StandoutScience
The DisGeNET knowledge platform for disease genomics: 2019 update
2019 Standout
Microbial Composition of Human Appendices from Patients following Appendectomy
2013
Impaired T cell receptor signaling and development of T cell–mediated autoimmune arthritis
2020 StandoutNobel
Human Disease Ontology 2018 update: classification, content and workflow expansion
2018
The bacterial pan-genome:a new paradigm in microbiology.
2010
Works of William Hsiao being referenced
Uncovering effects of antibiotics on the host and microbiota using transkingdom gene networks
2015
Microbial transformation from normal oral microbiota to acute endodontic infections
2012
Evaluation of genomic island predictors using a comparative genomics approach
2008
IslandPath: aiding detection of genomic islands in prokaryotes
2003
Genetic and Molecular Analysis of GogB, a Phage-encoded Type III-secreted Substrate in Salmonella enterica Serovar Typhimurium with Autonomous Expression from its Associated Phage
2005
Context Is Everything: Harmonization of Critical Food Microbiology Descriptors and Metadata for Improved Food Safety and Surveillance
2017
Detecting genomic islands using bioinformatics approaches
2010
The Association of Virulence Factors with Genomic Islands
2009
Crosstalk between B lymphocytes, microbiota and the intestinal epithelium governs immunity versus metabolism in the gut
2011
The Microbes of the Intestine: An Introduction to Their Metabolic and Signaling Capabilities
2008
Evidence of a Large Novel Gene Pool Associated with Prokaryotic Genomic Islands
2005
Analyzing Endodontic Infections by Deep Coverage Pyrosequencing
2010