Citation Impact
Citing Papers
Argonaute2 Is the Catalytic Engine of Mammalian RNAi
2004 StandoutScience
Comprehensive computational design of ordered peptide macrocycles
2017 StandoutScienceNobel
Structural Basis for Gating and Activation of RyR1
2016 StandoutNobel
A Modified Version of the Cornellet al.Force Field with Improved Sugar Pucker Phases and Helical Repeat
1999
On the Role of RNA Amplification in dsRNA-Triggered Gene Silencing
2001 StandoutNobel
Molecular dynamics simulation of nucleic acids: Successes, limitations, and promise
2000
NMR structure of the mouse prion protein domain PrP(121–231)
1996 StandoutNatureNobel
Poisson-Boltzmann analysis of the lambda repressor-operator interaction
1992
pH dependence of binding reactions from free energy simulations and macroscopic continuum electrostatic calculations: application to 2'GMP/3'GMP binding to ribonuclease T1 and implications for catalysis.
1995
DOCK 6: Combining techniques to model RNA–small molecule complexes
2009
Empirical force fields for biological macromolecules: Overview and issues
2004
Electrostatic calculations of side-chain pKa values in myoglobin and comparison with NMR data for histidines
1993
Cell surface biology mediated by low affinity multivalent protein–glycan interactions
2004
UCSF Chimera—A visualization system for exploratory research and analysis
2004 Standout
Programmable RNA recognition and cleavage by CRISPR/Cas9
2014 StandoutNatureNobel
Strain‐Promoted Copper‐Free “Click” Chemistry for 18F Radiolabeling of Bombesin
2011 StandoutNobel
Click Chemistry: Diverse Chemical Function from a Few Good Reactions
2001 StandoutNobel
Properties of Cloned and Expressed Human RNase H1
1999
Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM
2009 StandoutNobel
Finite-difference solution of the Poisson-Boltzmann equation: Complete elimination of self-energy
1996 StandoutNobel
Role for a bidentate ribonuclease in the initiation step of RNA interference
2001 StandoutNature
A computational approach for predicting off-target toxicity of antiviral ribonucleoside analogues to mitochondrial RNA polymerase
2018 StandoutNobel
Computer Aided Drug Design: Success and Limitations
2016
AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility
2009 Standout
Crystallographic Analysis of the Recognition of a Nuclear Localization Signal by the Nuclear Import Factor Karyopherin α
1998 StandoutNobel
Do salt bridges stabilize proteins? A continuum electrostatic analysis
1994
AutoDock Vina: Improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading
2009 Standout
A view of thermodynamics of hydration emerging from continuum studies
1994
The hydration and solvent polarization effects of nucleotide bases
1994
Structural biochemistry of a type 2 RNase H: RNA primer recognition and removal during DNA replication11Edited by K. Morikawa
2001
Nonpolar solutes enhance water structure within hydration shells while reducing interactions between them
2005 StandoutNobel
Atomic Radii for Continuum Electrostatics Calculations Based on Molecular Dynamics Free Energy Simulations
1997
An efficient F-18 labeling method for PET study: Huisgen 1,3-dipolar cycloaddition of bioactive substances and F-18-labeled compounds
2007
Ab Initio Evaluation of the Potential Surface for General Base- Catalyzed Methanolysis of Formamide: A Reference Solution Reaction for Studies of Serine Proteases
2000 StandoutNobel
Integral equation theories for predicting water structure around molecules
1999
Energetics of the Catalytic Reaction of Ribonuclease A: A Computational Study of Alternative Mechanisms
1998 StandoutNobel
Investigating Cell Surface Galectin-Mediated Cross-Linking on Glycoengineered Cells
2012 StandoutNobel
Methodologies for Generating Solution-Phase Combinatorial Libraries
2000
Fluorine and Fluorinated Motifs in the Design and Application of Bioisosteres for Drug Design
2018 Standout
A fast and Space-efficient boundary element method for computing electrostatic and hydration effects in large molecules
1996
Boron Nitride Nanotubes Are Noncytotoxic and Can Be Functionalized for Interaction with Proteins and Cells
2009 StandoutNobel
Limits of RNA 2′-OH Mimicry by Fluorine: Crystal Structure of Bacillus halodurans RNase H Bound to a 2′-FRNA:DNA Hybrid
2016
Enhanced visibility of hydrogen atoms by neutron crystallography on fully deuterated myoglobin
2000 StandoutNobel
Influence of 2′-Fluoro versus 2′-O-Methyl Substituent on the Sugar Puckering of 4′-C-Aminomethyluridine
2013
Calculating Acid-Dissociation Constants of Proteins Using the Boundary Element Method
1997
Boundary integral methods for the Poisson equation of continuum dielectric solvation models
1997
Classical Electrostatics in Biology and Chemistry
1995 StandoutScience
Implicit Solvation Models: Equilibria, Structure, Spectra, and Dynamics
1999 Standout
Precise and Ultrafast Molecular Sieving Through Graphene Oxide Membranes
2014 StandoutScienceNobel
Precise Modulation of CO2 Sorption in Ti8Ce2–Oxo Clusters: Elucidating Lewis Acidity of the Ce Metal Sites and Structural Flexibility
2024 StandoutNobel
Phosphate ester hydrolysis: calculation of gas-phase reaction paths and solvation effects
1994
Parameter Dependence in Continuum Electrostatic Calculations: A Study Using Protein Salt Bridges
1998
Effects of Hydration, Ion Release, and Excluded Volume on the Melting of Triplex and Duplex DNA
1998
Cation-π Interactions in Chemistry and Biology: A New View of Benzene, Phe, Tyr, and Trp
1996 StandoutScience
Solvent dramatically affects protein structure refinement
2008 StandoutNobel
Electrostatics of nanosystems: Application to microtubules and the ribosome
2001 Standout
DNA origami protection and molecular interfacing through engineered sequence-defined peptoids
2020 StandoutNobel
Computationally designed peptide macrocycle inhibitors of New Delhi metallo-β-lactamase 1
2021 StandoutNobel
All-atom empirical force field for nucleic acids: II. Application to molecular dynamics simulations of DNA and RNA in solution
2000
Continuum Electrostatics Model for Ion Solvation and Relative Acidity of HCl in Supercritical Water
1996
A Comprehensive Analytical Treatment of Continuum Electrostatics
1996
Click Chemistry: Diverse Chemical Function from a Few Good Reactions
2001 StandoutNobel
Progress in Modeling of Protein Structures and Interactions
2005 StandoutScienceNobel
Continuum Electrostatic Energies of Macromolecules in Aqueous Solutions
1997
Calculation of the aqueous solvation free energy of the proton
1998
A Continuum Solvation Model Including Electrostriction: Application to the Anisole Hydrolysis Reaction in Supercritical Water
1996
Rapid deconvolution of combinatorial libraries using HPLC fractionation
1998
Post-transcriptional gene-silencing: RNAs on the attack or on the defense?
2000
Interfacing Carbon Nanotubes with Living Cells
2006 StandoutNobel
Electrostatic interactions in macromolecules
1994
Calculation of Relative Binding Free Energies of Peptidic Inhibitors to HIV-1 Protease and Its I84V Mutant
1998
The Cavity and Pore Helices in the KcsA K + Channel: Electrostatic Stabilization of Monovalent Cations
1999 StandoutScienceNobel
Quantum Mechanical Continuum Solvation Models
2005 Standout
Conformational Flexibility of Phosphate, Phosphonate, and Phosphorothioate Methyl Esters in Aqueous Solution
1998 StandoutNobel
Applications of Fluorine in Medicinal Chemistry
2015 Standout
Cu-Catalyzed Azide−Alkyne Cycloaddition
2008 StandoutNobel
Ribosomal Synthesis of Unnatural Peptides
2005 StandoutNobel
Ultrafast electron diffraction and direct observation of transient structures in a chemical reaction
1999 StandoutNobel
Solvation Free Energies Estimated from Macroscopic Continuum Theory: An Accuracy Assessment
1994
2.1 and 1.8 Å Average Cα RMSD Structure Predictions on Two Small Proteins, HP-36 and S15
2001 StandoutNobel
A Chemoenzymatic Approach to Glycopeptide Antibiotics
2004
Universal Solvation Model Based on Solute Electron Density and on a Continuum Model of the Solvent Defined by the Bulk Dielectric Constant and Atomic Surface Tensions
2009 Standout
Synopsis of Some Recent Tactical Application of Bioisosteres in Drug Design
2011 Standout
Metabolic labeling enables selective photocrosslinking of O-GlcNAc-modified proteins to their binding partners
2012 StandoutNobel
Chemical Glycoproteomics
2016 StandoutNobel
A simple physical model for binding energy hot spots in protein–protein complexes
2002 StandoutNobel
Calculation of Alkane to Water Solvation Free Energies Using Continuum Solvent Models
1996
A smooth particle mesh Ewald method
1995 Standout
Works of V. Mohan being referenced
Identification of ligands for RNA targets via structure-based virtual screening: HIV-1 TAR
2000
Structural properties of DNA:RNA duplexes containing 2'-O-methyl and 2'-S-methyl substitutions: a molecular dynamics investigation
1999
Vibrational Analysis of Phosphorothioate DNA: II. The POS Group in the Model Compound Dimethyl Phosphorothioate [(CH3O)2(POS)]-
1997
Orally efficacious thrombin inhibitors with cyanofluorophenylacetamide as the P2 motif
2008
The Influence of Antisense Oligonucleotide-induced RNA Structure on Escherichia coli RNase H1 Activity
1997
Docking: Successes and Challenges
2005
Solution phase combinatorial chemistry. Discovery of 13- and 15-membered polyazapyridinocyclophane libraries with antibacterial activity
1998
Evidence for a new spine of hydration: solvation of DNA triple helixes
1993
Nanosecond Dynamics and Structure of a Model DNA Triple Helix in Saltwater Solution
1995
An Extended Phosphate Linkage: Synthesis, Hybridization and Modeling Studies of Modified Oligonucleotides
1996
Synthesis of Antisense Oligonucleotides Conjugated to a Multivalent Carbohydrate Cluster for Cellular Targeting
2002
Molecular dynamics simulation of ions and water around triplex DNA
1993
Continuum model calculations of solvation free energies: accurate evaluation of electrostatic contributions
1992