Citation Impact

Citing Papers

Antisense transcripts from immunoglobulin heavy-chain locus V(D)J and switch regions
2008
Sequence Dependence of Chromosomal R-Loops at the Immunoglobulin Heavy-Chain Sμ Class Switch Region
2007
Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling
2009 StandoutScience
Nuclear Export of MicroRNA Precursors
2003 StandoutScience
C-terminal region of activation-induced cytidine deaminase (AID) is required for efficient class switch recombination and gene conversion
2014 StandoutNobel
A role for the RNA pol II–associated PAF complex in AID-induced immune diversification
2012
Construction of self-recognizing regulatory T cells from conventional T cells by controlling CTLA-4 and IL-2 expression
2013 StandoutNobel
Structural Roles for Human Translation Factor eIF3 in Initiation of Protein Synthesis
2005 StandoutScienceNobel
The structure of the 80S ribosome from Trypanosoma cruzi reveals unique rRNA components
2005 StandoutNobel
Classical and Alternative End-Joining Pathways for Repair of Lymphocyte-Specific and General DNA Double-Strand Breaks
2012
Discovery of Activation‐Induced Cytidine Deaminase, the Engraver of Antibody Memory
2007 StandoutNobel
Programmable base editing of zebrafish genome using a modified CRISPR-Cas9 system
2017
Transcription factor achaete-scute homologue 2 initiates follicular T-helper-cell development
2014 Nature
Platelet factor 4–induced T H 1-T reg polarization suppresses antitumor immunity
2024 StandoutScienceNobel
Collateral Damage from Antigen Receptor Gene Diversification
2008
Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage
2016 StandoutNature
The biochemistry of activation-induced deaminase and its physiological functions
2012
Deep-sequencing identification of the genomic targets of the cytidine deaminase AID and its cofactor RPA in B lymphocytes
2010
Mechanisms and impacts of chromosomal translocations in cancers
2012
Uracil in DNA—General mutagen, but normal intermediate in acquired immunity
2006
Two levels of protection for the B cell genome during somatic hypermutation
2008 Nature
Intestinal homeostasis and its breakdown in inflammatory bowel disease
2011 StandoutNature
Mechanisms of Programmed DNA Lesions and Genomic Instability in the Immune System
2013
The splicing regulator PTBP2 interacts with the cytidine deaminase AID and promotes binding of AID to switch-region DNA
2010
Activation-induced deaminase, AID, is catalytically active as a monomer on single-stranded DNA
2007
Follicular regulatory T cells expressing Foxp3 and Bcl-6 suppress germinal center reactions
2011
nhl-2 Modulates MicroRNA Activity in Caenorhabditis elegans
2009 StandoutNobel
Ribosome assembly in eukaryotes
2003
MicroRNA-155 Is a Negative Regulator of Activation-Induced Cytidine Deaminase
2008
T Follicular Helper Cell Differentiation, Function, and Roles in Disease
2014
An Essential GTPase Promotes Assembly of Preribosomal RNA Processing Complexes
2005 StandoutNobel
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
2011 StandoutNatureNobel
Mammalian microRNAs predominantly act to decrease target mRNA levels
2010 StandoutNature
MicroRNAs: Target Recognition and Regulatory Functions
2009 Standout
Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage
2017 StandoutNature
A three-dimensional view of the molecular machinery of RNA interference
2008 StandoutNatureNobel
Non-coding RNA Generated following Lariat Debranching Mediates Targeting of AID to DNA
2015
Genetic Evidence for Single-Strand Lesions Initiating Nbs1-Dependent Homologous Recombination in Diversification of Ig V in Chicken B Lymphocytes
2009
Active nuclear import and cytoplasmic retention of activation-induced deaminase
2009
Nucleocytoplasmic transport: taking an inventory
2003
MicroRNA-155 Suppresses Activation-Induced Cytidine Deaminase-Mediated Myc-Igh Translocation
2008
Interaction between Antibody-Diversification Enzyme AID and Spliceosome-Associated Factor CTNNBL1
2008
The Histone Chaperone Spt6 Is Required for Activation-induced Cytidine Deaminase Target Determination through H3K4me3 Regulation
2012 StandoutNobel
APOBEC deaminases-mutases with defensive roles for immunity
2009
Activation-Induced Cytidine Deaminase Targets DNA at Sites of RNA Polymerase II Stalling by Interaction with Spt5
2010
A Phase Separation Model for Transcriptional Control
2017
Dendritic cells in cancer immunology
2021
A coming-of-age story: activation-induced cytidine deaminase turns 10
2009
Activation-induced cytidine deaminase structure and functions: A species comparative view
2011
The AID/APOBEC family of nucleic acid mutators
2008
Balancing AID and DNA repair during somatic hypermutation
2009
Widespread changes in protein synthesis induced by microRNAs
2008 StandoutNature
TET enzymes, TDG and the dynamics of DNA demethylation
2013 StandoutNature
Activation-induced cytidine deaminase: structure–function relationship as based on the study of mutants
2006
Dual Function of eIF3j/Hcr1p in Processing 20 S Pre-rRNA and Translation Initiation
2001
IgH class switching and translocations use a robust non-classical end-joining pathway
2007 Nature
Human Circulating PD-1+CXCR3−CXCR5+ Memory Tfh Cells Are Highly Functional and Correlate with Broadly Neutralizing HIV Antibody Responses
2013
The causes and consequences of genetic heterogeneity in cancer evolution
2013 StandoutNature
MicroRNA silencing through RISC recruitment of eIF6
2007 Nature
GW182 interaction with Argonaute is essential for miRNA-mediated translational repression and mRNA decay
2008
AID Produces DNA Double-Strand Breaks in Non-Ig Genes and Mature B Cell Lymphomas with Reciprocal Chromosome Translocations
2009
I. VH gene transcription creates stabilized secondary structures for coordinated mutagenesis during somatic hypermutation
2008
DNA-PKcs has KU-dependent function in rRNA processing and haematopoiesis
2020 StandoutNatureNobel
Determinants of sequence-specificity within human AID and APOBEC3G
2010
Negative Supercoiling Creates Single-Stranded Patches of DNA That Are Substrates for AID–Mediated Mutagenesis
2012
The AID Dilemma
2012 StandoutNobel
SHMTool: A webserver for comparative analysis of somatic hypermutation datasets
2008
DNA Demethylation Dynamics
2011
Genome-Wide Mutation Avalanches Induced in Diploid Yeast Cells by a Base Analog or an APOBEC Deaminase
2013
Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?
2008 Standout
AID Targeting in Antibody Diversity
2011
Modeling neurodevelopmental disorder-associated humanAGO1mutations inCaenorhabditis elegansArgonautealg-1
2024 StandoutNobel
Alternative end-joining catalyzes robust IgH locus deletions and translocations in the combined absence of ligase 4 and Ku70
2010
Carboxy-terminal domain of AID required for its mRNA complex formation in vivo
2009 StandoutNobel
Replacement of Iγ3 germ-line promoter by Iγ1 inhibits class-switch recombination to IgG3
2007
The activation-induced cytidine deaminase (AID) efficiently targets DNA in nucleosomes but only during transcription
2009
Accumulation of the FACT complex, as well as histone H3.3, serves as a target marker for somatic hypermutation
2013 StandoutNobel
Nonimmunoglobulin target loci of activation-induced cytidine deaminase (AID) share unique features with immunoglobulin genes
2012 StandoutNobel
Dependence of antibody gene diversification on uracil excision
2007
AID Binds Cooperatively with UNG and Msh2-Msh6 to Ig Switch Regions Dependent upon the AID C Terminus
2011
Nonoverlapping roles of PD-1 and FoxP3 in maintaining immune tolerance in a novel autoimmune pancreatitis mouse model
2016 StandoutNobel
Identification of DNA cleavage- and recombination-specific hnRNP cofactors for activation-induced cytidine deaminase
2015 StandoutNobel
Decrease in topoisomerase I is responsible for activation-induced cytidine deaminase (AID)-dependent somatic hypermutation
2011 StandoutNobel
PKA-mediated phosphorylation regulates the function of activation-induced deaminase (AID) in B cells
2005
Targeted nucleotide editing using hybrid prokaryotic and vertebrate adaptive immune systems
2016 StandoutScience
Molecular mechanism for generation of antibody memory
2008 StandoutNobel
The Molecular Mechanics of Eukaryotic Translation
2004
AID-induced decrease in topoisomerase 1 induces DNA structural alteration and DNA cleavage for class switch recombination
2009 StandoutNobel
Kinase-dependent structural role of DNA-PKcs during immunoglobulin class switch recombination
2018
The C-terminal region of activation-induced cytidine deaminase is responsible for a recombination function other than DNA cleavage in class switch recombination
2009 StandoutNobel
PMS2 endonuclease activity has distinct biological functions and is essential for genome maintenance
2010 StandoutNobel
Germinal Centers
2012
Epigenetic tethering of AID to the donor switch region during immunoglobulin class switch recombination
2011
S region sequence, RNA polymerase II, and histone modifications create chromatin accessibility during class switch recombination
2009
Further evidence for involvement of a noncanonical function of uracil DNA glycosylase in class switch recombination
2009 StandoutNobel
The Biochemistry of Somatic Hypermutation
2008
Molecular Mechanisms of Antibody Somatic Hypermutation
2007
Cytoplasmic activation-induced cytidine deaminase (AID) exists in stoichiometric complex with translation elongation factor 1α (eEF1A)
2011
Differential regulation of S-region hypermutation and class-switch recombination by noncanonical functions of uracil DNA glycosylase
2014 StandoutNobel
Ribosome Biogenesis in the YeastSaccharomyces cerevisiae
2013
Adaptive Immune Regulation in the Gut: T Cell–Dependent and T Cell–Independent IgA Synthesis
2010
5'-Triphosphate RNA Is the Ligand for RIG-I
2006 StandoutScience
RNA editing of hepatitis B virus transcripts by activation-induced cytidine deaminase
2013 StandoutNobel
Dissociation of in vitro DNA deamination activity and physiological functions of AID mutants
2008 StandoutNobel
Mechanism and Regulation of Class Switch Recombination
2008
Histone chaperone Spt6 is required for class switch recombination but not somatic hypermutation
2011 StandoutNobel
53BP1 regulates DNA resection and the choice between classical and alternative end joining during class switch recombination
2010
Structure and assembly model for the Trypanosoma cruzi 60S ribosomal subunit
2016 StandoutNobel
Amino-Terminal Phosphorylation of Activation-Induced Cytidine Deaminase Suppresses c-myc/IgH Translocation
2010
Evolutionary Comparison of the Mechanism of DNA Cleavage with Respect to Immune Diversity and Genomic Instability
2012 StandoutNobel
Structural basis for Zika envelope domain III recognition by a germline version of a recurrent neutralizing antibody
2020 StandoutNobel
Histone3 lysine4 trimethylation regulated by the facilitates chromatin transcription complex is critical for DNA cleavage in class switch recombination
2010 StandoutNobel
APE1 is dispensable for S-region cleavage but required for its repair in class switch recombination
2014 StandoutNobel
Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3
2008 StandoutNobel
A distinct subpopulation of CD25T-follicular regulatory cells localizes in the germinal centers
2017 StandoutNobel
Functional requirements of AID’s higher order structures and their interaction with RNA-binding proteins
2016 StandoutNobel
Antiviral Protein APOBEC3G Localizes to Ribonucleoprotein Complexes Found in P Bodies and Stress Granules
2006
Liquid phase condensation in cell physiology and disease
2017 StandoutScience
Mechanism of R-Loop Formation at Immunoglobulin Class Switch Sequences
2007
Immunoglobulin Somatic Hypermutation
2007

Works of Uttiya Basu being referenced

Evolution of the Immunoglobulin Heavy Chain Class Switch Recombination Mechanism
2007
The AID antibody diversification enzyme is regulated by protein kinase A phosphorylation
2005 Nature
RNA Exosome-Regulated Long Non-Coding RNA Transcription Controls Super-Enhancer Activity
2015
AID in somatic hypermutation and class switch recombination
2006
The RNA Exosome Targets the AID Cytidine Deaminase to Both Strands of Transcribed Duplex DNA Substrates
2011
Regulation of Activation Induced Deaminase via Phosphorylation
2007
The transcription factor BATF controls the global regulators of class-switch recombination in both B cells and T cells
2011
Nuclear Proximity of Mtr4 to RNA Exosome Restricts DNA Mutational Asymmetry
2017
Evolution of Phosphorylation-Dependent Regulation of Activation-Induced Cytidine Deaminase
2008
Noncoding RNA transcription targets AID to divergently transcribed loci in B cells
2014 Nature
The Saccharomyces cerevisiae TIF6 Gene Encoding Translation Initiation Factor 6 Is Required for 60S Ribosomal Subunit Biogenesis
2001
Integrity of the AID serine-38 phosphorylation site is critical for class switch recombination and somatic hypermutation in mice
2009
Regulation of activation-induced cytidine deaminase DNA deamination activity in B-cells by Ser38 phosphorylation
2009
Post-translational regulation of activation-induced cytidine deaminase
2008
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