Citation Impact

Citing Papers

DiarrheagenicEscherichia coli
1998 Standout
An Engineered Microbial Platform for Direct Biofuel Production from Brown Macroalgae
2012 StandoutScienceNobel
The mucin-selective protease StcE enables molecular and functional analysis of human cancer-associated mucins
2019 StandoutNobel
Visualization of the movement of single histidine kinase molecules in live Caulobacter cells
2004 StandoutNobel
Linkage Map ofEscherichia coliK-12, Edition 10: The Traditional Map
1998
Supramolecular structure of the Shigella type III secretion machinery: the needle part is changeable in length and essential for delivery of effectors
2000
Next generation sequencing analysis reveals that the ribonucleases RNase II, RNase R and PNPase affect bacterial motility and biofilm formation in E. coli
2015
The Structural Basis for mRNA Recognition and Cleavage by the Ribosome-Dependent Endonuclease RelE
2009 StandoutNobel
Extracellular association and cytoplasmic partitioning of the IpaB and IpaC invasins of S. flexneri
1994
The microbial pan-genome
2005
Role of the transcriptional activator, VirF, and temperature in the expression of the pYV plasmid genes of Yersinia enterocolitica
1992
Type III secretion systems: machines to deliver bacterial proteins into eukaryotic cells?
1997
The Role of Short-Chain Fatty Acids in Health and Disease
2014 Standout
Identification of Bacteriophage-Encoded Anti-sRNAs in Pathogenic Escherichia coli
2014
Atomic model of the type III secretion system needle
2012 StandoutNatureNobel
The cytosolic SycE and SycH chaperones of Yersinia protect the region of YopE and YopH involved in translocation across eukaryotic cell membranes
1996
Differential Regulation of Caspase-1 Activation, Pyroptosis, and Autophagy via Ipaf and ASC in Shigella-Infected Macrophages
2007
Nucleotide sequence of the ipaBCD structural genes of Shigella dysenteriae
1991
Role of EspF in host cell death induced by enteropathogenic Escherichia coli
2001
Lateral gene transfer and the nature of bacterial innovation
2000 StandoutNature
hrp Genes of Phytopathogenic Bacteria
1994
Identification of endoribonuclease specific cleavage positions reveals novel targets of RNase III inStreptococcus pyogenes
2017 StandoutNobel
Identification of a novel genetic locus that is required for in vitro adhesion of a clinical isolate of enterohaemorrhagic Escherichia coli to epithelial cells
2000
Dual Detection of Fungal Infections in Drosophila via Recognition of Glucans and Sensing of Virulence Factors
2006 StandoutNobel
Structure of the Type VI Secretion System Contractile Sheath
2015 StandoutNobel
A Dietary Fiber-Deprived Gut Microbiota Degrades the Colonic Mucus Barrier and Enhances Pathogen Susceptibility
2016 Standout
An RNA-seq based comparative approach reveals the transcriptome-wide interplay between 3′-to-5′ exoRNases and RNase Y
2020 StandoutNobel
RNA-based recognition and targeting: sowing the seeds of specificity
2017 StandoutNobel
Interactions between enteropathogenic Escherichia coli and host epithelial cells
1997
Molecular and Cellular Biology of Shigella flexneri Invasiveness: From Cell Assay Systems to Shigellosis
1992
The virulence plasmid pWR100 and the repertoire of proteins secreted by the type III secretion apparatus of Shigella flexneri
2000
Recognition of microorganisms and activation of the immune response
2007 StandoutNature
The hrp gene locus of Pseudomonas solanacearum, which controls the production of a type III secretion system, encodes eight proteins related to components of the bacterial flagellar biogenesis complex
1995
High-resolution structure of the Shigella type-III secretion needle by solid-state NMR and cryo-electron microscopy
2014 StandoutNobel
Pilus retraction powers bacterial twitching motility
2000 Nature
Quality control of mRNA 3′-end processing is linked to the nuclear exosome
2001 StandoutNatureNobel
Structure‐function analysis of the self‐recognizing Antigen 43 autotransporter protein from Escherichia coli
2003
icsB: a Shigella flexneri virulence gene necessary for the lysis of protrusions during intercellular spread
1992
Structure-guided mutagenesis of a mucin-selective metalloprotease from Akkermansia muciniphila alters substrate preferences
2022 StandoutNobel
Indigenous Bacteria from the Gut Microbiota Regulate Host Serotonin Biosynthesis
2015 Standout
Characterization and evidence of mobilization of the LEE pathogenicity island of rabbit‐specific strains of enteropathogenic Escherichia coli
2002
The Per regulon of enteropathogenic Escherichia coli : identification of a regulatory cascade and a novel transcriptional activator, the locus of enterocyte effacement (LEE)‐encoded regulator (Ler)
1999
Bacillus subtilis flagellar proteins FliP, FliQ, FliR and FlhB are related to Shigella flexneri virulence factors
1993
Frenemies: Signaling and Nutritional Integration in Pathogen-Microbiota-Host Interactions
2015
Pathogenic Escherichia coli
2004 Standout
M. tuberculosis and M. leprae Translocate from the Phagolysosome to the Cytosol in Myeloid Cells
2007 Standout
Strategies for development of potential candidate Shigella vaccines
1993
Plant pathogens and integrated defence responses to infection
2001 StandoutNature
Bacterial Adhesion and Entry into Host Cells
2006
Type IV Pilus Structure by Cryo-Electron Microscopy and Crystallography: Implications for Pilus Assembly and Functions
2006
Transcriptional regulation of type III secretion genes in enteropathogenic Escherichia coli: Ler antagonizes H‐NS‐dependent repression
2001
Chapter 5 The Role of 3′–5′ Exoribonucleases in RNA Degradation
2009
Enhanced secretion through the Shigella flexneri Mxi‐Spa translocon leads to assembly of extracellular proteins into macromolecular structures
1995
Customized secretion chaperones in pathogenic bacteria
1996
An activator of glutamate decarboxylase genes regulates the expression of enteropathogenic Escherichia coli virulence genes through control of the plasmid‐encoded regulator, Per
2001
The absence of a surface protease, OmpT, determines the intercellular spreading ability of Shigella: the relationship between the ompT and kcpA loci
1993
The making of a gradient: IcsA (VirG) polarity in Shigella flexneri
2001
Shigella flexneri: Isolation of noninvasive mutants of gram-negative pathogens
1994
Temperature regulation of Shigella virulence: identification of the repressor gene virR, an analogue of hns, and partial complementation by tyrosyl transfer RNA (tRNA1Tyr)
1992
H‐NS: a modulator of environmentally regulated gene expression
1997
The Solution Structure of the S1 RNA Binding Domain: A Member of an Ancient Nucleic Acid–Binding Fold
1997
Type III secretion genes identify a putative virulence locus of Chlamydia
1997
Ecological and Evolutionary Forces Shaping Microbial Diversity in the Human Intestine
2006 Standout
The Large Virulence Plasmid of Shigella
1992
Environmental Regulation of Shigella Virulence
1992
The bacterial injection kit: Type III secretion systems
2005
The Inflammasomes
2010 Standout
The Exosome: A Conserved Eukaryotic RNA Processing Complex Containing Multiple 3′→5′ Exoribonucleases
1997
RNase R is a highly unstable protein regulated by growth phase and stress
2010
Microbial chemical signaling: a current perspective
2012
Quorum-sensing in Gram-negative bacteria
2001 Standout
Mechanism of action of EPEC Type III effector molecules
2001
Role of the nucleoid‐associated protein Fis in the regulation of virulence properties of enteropathogenic Escherichia coli
2001
Cold shock induction of RNase R and its role in the maturation of the quality control mediator SsrA/tmRNA
2003
Virulence protein export systems in Salmonella and Shigella: a new family or lost relatives?
1994
Human DNA Damage Checkpoint Protein hRAD9 Is a 3′ to 5′ Exonuclease
2000 StandoutNobel
UniProt: the Universal Protein knowledgebase
2003 Standout
Type IV pili and cell motility
1999
Bacterial entry into epithelial cells: the paradigm of Shigella
1996
Bifidobacteria can protect from enteropathogenic infection through production of acetate
2011 StandoutNature
Enteropathogenic and enterohaemorrhagic Escherichia coli : more subversive elements
1998
Invasion and the Pathogenesis of Shigella Infections
1996
Extracellular electron transfer via microbial nanowires
2005 StandoutNature
Molecular Mechanisms of Bacterial Virulence: Type III Secretion and Pathogenicity Islands
1996
In vivo 3′-to-5′ exoribonuclease targetomes of Streptococcus pyogenes
2018 StandoutNobel
Modulation of Virulence Factor Expression by Pathogen Target Cell Contact
1996 Science
Identification of two targets of the type III protein secretion system encoded by the inv and spa loci of Salmonella typhimurium that have homology to the Shigella IpaD and IpaA proteins
1995
A segment of cold shock protein directs the folding of a combinatorial protein
2005 StandoutNobel
Soluble invasion plasmid antigen C (IpaC) from Shigella flexneri elicits epithelial cell responses related to pathogen invasion
1996
YopB and YopD constitute a novel class of Yersinia Yop proteins
1993
mxiA of Shigella flexneri 2a, which facilitates export of invasion plasmid antigens, encodes a homolog of the low-calcium-response protein, LcrD, of Yersinia pestis
1992
Molecular Pathogenesis ofShigellaspp.: Controlling Host Cell Signaling, Invasion, and Death by Type III Secretion
2008
Visualization of protein S1 within the 30S ribosomal subunit and its interaction with messenger RNA
2001 StandoutNobel
Characterization of the Shigella flexneri ipgD and ipgF genes, which are located in the proximal part of the mxi locus
1993
Novel folded protein domains generated by combinatorial shuffling of polypeptide segments
2000 StandoutNobel
Increased protein secretion and adherence to HeLa cells by Shigella spp. following growth in the presence of bile salts
1995
Hierarchy in the expression of the locus of enterocyte effacement genes of enteropathogenic Escherichia coli
1999
Down regulation of intimin expression during attaching and effacing enteropathogenic Escherichia coli adhesion
1997
cag , a pathogenicity island of Helicobacter pylori, encodes type I-specific and disease-associated virulence factors
1996 Standout
Shigella subversion of the cellular cytoskeleton: a strategy for epithelial colonization
1993
toxB Gene on pO157 of Enterohemorrhagic Escherichia coli O157:H7 Is Required for Full Epithelial Cell Adherence Phenotype
2001
Crystal Structure of an Initiation Factor Bound to the 30 S Ribosomal Subunit
2001 StandoutScienceNobel
IS 1414 , an Escherichia coli Insertion Sequence with a Heat-Stable Enterotoxin Gene Embedded in a Transposase-Like Gene
2000
Relationship between evolutionary rate and cellular location among the Inv/Spa invasion proteins of Salmonella enterica.
1995
Flagellar and twitching motility are necessary for Pseudomonas aeruginosa biofilm development
1998 Standout
The phytopathogenic bacteria Erwinia carotovora infects Drosophila and activates an immune response
2000 StandoutNobel
Nonpolar mutagenesis of the ipa genes defines IpaB, IpaC, and IpaD as effectors of Shigella flexneri entry into epithelial cells
1993
Bacterial Biofilms: A Common Cause of Persistent Infections
1999 StandoutScience
IpaB of Shigella flexneri causes entry into epithelial cells and escape from the phagocytic vacuole.
1992
CROSS-TALK BETWEEN BACTERIAL PATHOGENS AND THEIR HOST CELLS
1996
Shigella flexneri LuxS Quorum-Sensing System Modulates virB Expression but Is Not Essential for Virulence
2001
Common themes in microbial pathogenicity revisited.
1997
MxiD, an outer membrane protein necessary for the secretion of the Shigella flexneri Ipa invasins
1993
Disulfide oxidoreductase activity of Shigella flexneri is required for release of Ipa proteins and invasion of epithelial cells.
1995
Nucleotide sequence and transcriptional regulation of a positive regulatory gene of Shigella dysenteriae
1992
HrpI of Erwinia amylovora functions in secretion of harpin and is a member of a new protein family
1993
N-acyl-l-homoserine lactone signal interception byEscherichia coli
2006
Homologs of the Shigella IpaB and IpaC invasins are required for Salmonella typhimurium entry into cultured epithelial cells
1995
Common themes in microbial pathogenicity revisited
1997 Standout
Secretion of Shigella flexneri Ipa invasins on contact with epithelial cells and subsequent entry of the bacterium into cells are growth stage dependent
1997
Extracellular DNA Required for Bacterial Biofilm Formation
2002 StandoutScience
Osmosensory signaling in Mycobacterium tuberculosis mediated by a eukaryotic-like Ser/Thr protein kinase
2013 StandoutNobel
Molecular and functional characterization of the Salmonella typhimurium invasion genes invB and invC: homology of InvC to the F0F1 ATPase family of proteins
1994
THE ATP SYNTHASE—A SPLENDID MOLECULAR MACHINE
1997 StandoutNobel
A role for H-NS in the thermo-osmotic regulation of virulence gene expression in Shigella flexneri
1994
The secreted Ipa complex of Shigella flexneri promotes entry into mammalian cells.
1996
Two novel virulence loci, mxiA and mxiB, in Shigella flexneri 2a facilitate excretion of invasion plasmid antigens
1991
Isolation and characterization of FliK-independent flagellation mutants from Salmonella typhimurium
1994
The secretion of the Shigella flexneri Ipa invasins is activated by epithelial cells and controlled by IpaB and IpaD.
1994
Interaction of Ipa proteins of Shigella flexneri with alpha5beta1 integrin promotes entry of the bacteria into mammalian cells.
1996
Functional conservation of the secretion and translocation machinery for virulence proteins of yersiniae, salmonellae and shigellae.
1995
The microbial metabolite butyrate regulates intestinal macrophage function via histone deacetylase inhibition
2014 Standout
Invasion of epithelial cells by Shigella flexneri induces tyrosine phosphorylation of cortactin by a pp60c-src-mediated signalling pathway.
1995
Delineation and mutational analysis of the Yersinia pseudotuberculosis YopE domains which mediate translocation across bacterial and eukaryotic cellular membranes
1996
Probiotic Bifidobacteria Protect Mice from Lethal Infection with Shiga Toxin-Producing Escherichia coli O157:H7
2004
d - myo -Inositol 1,4,5,6-tetrakisphosphate produced in human intestinal epithelial cells in response to Salmonella invasion inhibits phosphoinositide 3-kinase signaling pathways
1997 StandoutNobel
Mutations in yscC, yscD, and yscG prevent high-level expression and secretion of V antigen and Yops in Yersinia pestis
1995
The YopB protein of Yersinia pseudotuberculosis is essential for the translocation of Yop effector proteins across the target cell plasma membrane and displays a contact-dependent membrane disrupting activity.
1996
A third secreted protein that is encoded by the enteropathogenic Escherichia coli pathogenicity island is required for transduction of signals and for attaching and effacing activities in host cells
1997
Quorum sensing controls expression of the type III secretion gene transcription and protein secretion in enterohemorrhagic and enteropathogenic Escherichia coli
1999
Molecular characterization of the Salmonella typhimurium flhB operon and its protein products
1994
A low-Ca2+ response (LCR) secretion (ysc) locus lies within the lcrB region of the LCR plasmid in Yersinia pestis
1994
Characterization of EspC, a 110-kilodalton protein secreted by enteropathogenic Escherichia coli which is homologous to members of the immunoglobulin A protease-like family of secreted proteins
1996
(p)ppGpp: Still Magical?
2008
Involvement of cpxA, a sensor of a two-component regulatory system, in the pH-dependent regulation of expression of Shigella sonnei virF gene
1995
Type III Protein Secretion Systems in Bacterial Pathogens of Animals and Plants
1998 Standout
Type III Secretion: More Systems Than You Think
2005
Helicobacter pylori Virulence and Genetic Geography
1999 StandoutScience
Functional analysis of the Salmonella typhimurium invasion genes invl and invJ and identification of a target of the protein secretion apparatus encoded in the inv locus
1995
MxiJ, a lipoprotein involved in secretion of Shigella Ipa invasins, is homologous to YscJ, a secretion factor of the Yersinia Yop proteins
1992
The lcrB (yscN/U) gene cluster of Yersinia pseudotuberculosis is involved in Yop secretion and shows high homology to the spa gene clusters of Shigella flexneri and Salmonella typhimurium
1994
THE DIVERSE AND DYNAMIC STRUCTURE OF BACTERIAL GENOMES
1998
Temperature sensing in Yersinia pestis: regulation of yopE transcription by lcrF
1992
Culture of Campylobacter jejuni with Sodium Deoxycholate Induces Virulence Gene Expression
2008
Identification of a virulence locus encoding a second type III secretion system in Salmonella typhimurium.
1996
The StcE Protease Contributes to Intimate Adherence of EnterohemorrhagicEscherichia coliO157:H7 to Host Cells
2005
Pathogenicity Islands of Intestinal E. coli
2002
ANTIBIOTICS TARGETING RIBOSOMES: Resistance, Selectivity, Synergism, and Cellular Regulation
2005 StandoutNobel
espC Pathogenicity Island of Enteropathogenic Escherichia coli Encodes an Enterotoxin
2001
YscU, a Yersinia enterocolitica inner membrane protein involved in Yop secretion
1994
rho, a Small GTP-Binding Protein, Is Essential for Shigella Invasion of Epithelial Cells
1997
Phylogenetic Perspectives in Innate Immunity
1999 StandoutScienceNobel
Engineered bidirectional communication mediates a consensus in a microbial biofilm consortium
2007 StandoutNobel
Cryptococcosis in the era of AIDS--100 years after the discovery of Cryptococcus neoformans
1995 Standout
Hrp pilus: An hrp -dependent bacterial surface appendage produced by Pseudomonas syringae pv. tomato  DC3000
1997
Surface presentation of Shigella flexneri invasion plasmid antigens requires the products of the spa locus
1992
Signaling in Plant-Microbe Interactions
1997 Science
Erwinia amylovora secretes harpin via a type III pathway and contains a homolog of yopN of Yersinia spp
1996
Co‐ordination of pathogenicity island expression by the BipA GTPase in enteropathogenic Escherichia coli (EPEC)
2003
Afa, a Diffuse Adherence Fibrillar Adhesin Associated with Enteropathogenic Escherichia coli
2002
Requirement for exported proteins in secretion through the invasion-associated type III system of Salmonella typhimurium
1996
Genome Sequence of an Obligate Intracellular Pathogen of Humans: Chlamydia trachomatis
1998 StandoutScience

Works of Toru Tobe being referenced

ppGpp with DksA controls gene expression in the locus of enterocyte effacement (LEE) pathogenicity island of enterohaemorrhagic Escherichia coli through activation of two virulence regulatory genes
2006
SdiA, an Escherichia coli homologue of quorum‐sensing regulators, controls the expression of virulence factors in enterohaemorrhagic Escherichia coli O157:H7
2000
Temperature‐regulated expression of invasion genes in Shigella flexneri is controlled through the transcriptional activation of the virB gene on the large plasmid
1991
Deregulation of temperature‐dependent transcription of the invasion regulatory gene, virB, in Shigella by rho mutation
1994
Functional organization and nucleotide sequence of virulence Region‐2 on the large virulence plasmid in Shigella flexneri 2a
1989
Identification of a novel virulence gene, virA, on the large plasmid of Shigella, involved in invasion and intercellular spreading
1995
Cloning and characterization of bfpTVW, genes required for the transcriptional activation of bfpA in enteropathogenic Escherichia coli
1996
Identification and characterization of virK, a virulence‐associated large plasmid gene essential for intercellular spreading of Shigella flexneri
1992
Construction of a physical map of the chromosome of Shigella flexneri 2a and the direct assignment of nine virulence‐associated loci identified by Tn5 insertions
1991
Virulence‐associated chromosomal loci of Shigella flexneri identified by random Tn5 insertion mutagenesis
1991
A novel small regulatory RNA enhances cell motility in enterohemorrhagic Escherichia coli
2014
Species-specific cell adhesion of enteropathogenic Escherichia coli is mediated by type IV bundle-forming pili
2002
A novel chromosomal locus of enteropathogenic Escherichia coli (EPEC), which encodes a bfpT‐regulated chaperone‐like protein, TrcA, involved in microcolony formation by EPEC
1999
Thermoregulation of virB transcription in Shigella flexneri by sensing of changes in local DNA superhelicity
1995
Type IV Pili, Transient Bacterial Aggregates, and Virulence of Enteropathogenic Escherichia coli
1998 Science
vacB, a novel chromosomal gene required for expression of virulence genes on the large plasmid of Shigella flexneri
1992
Complete DNA Sequence and Structural Analysis of the Enteropathogenic Escherichia coli Adherence Factor Plasmid
1999
Bicarbonate Ion Stimulates the Expression of Locus of Enterocyte Effacement-Encoded Genes in Enterohemorrhagic Escherichia coli O157:H7
2002
Isolation and Characterization of Mini-Tn 5 Km2 Insertion Mutants of Enterohemorrhagic Escherichia coli O157:H7 Deficient in Adherence to Caco-2 Cells
2000
Distribution of the Secondary Type III Secretion System Locus Found in Enterohemorrhagic Escherichia coli O157:H7 Isolates among Shiga Toxin-Producing E. coli Strains
2003
Extensive Genomic Diversity in Pathogenic Escherichia coli and Shigella Strains Revealed by Comparative Genomic Hybridization Microarray
2004
Transcriptional control of the invasion regulatory gene virB of Shigella flexneri: activation by virF and repression by H-NS
1993
Regulation of virulence by butyrate sensing in enterohaemorrhagic Escherichia coli
2009
Eight genes in region 5 that form an operon are essential for invasion of epithelial cells by Shigella flexneri 2a
1993
Contact of Shigella with host cells triggers release of Ipa invasins and is an essential function of invasiveness.
1995
Rankless by CCL
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