Citation Impact

Citing Papers

Generation of knock-in primary human T cells using Cas9 ribonucleoproteins
2015 StandoutNobel
C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector
2016 StandoutScience
Sensing DNA Damage Through ATRIP Recognition of RPA-ssDNA Complexes
2003 StandoutScience
Inactivation of a Pseudomonas aeruginosa quorum-sensing signal by human airway epithelia
2004
C-terminal region of activation-induced cytidine deaminase (AID) is required for efficient class switch recombination and gene conversion
2014 StandoutNobel
Stress-Induced Mutagenesis in Bacteria
2003 Science
Long Patch Base Excision Repair Proceeds via Coordinated Stimulation of the Multienzyme DNA Repair Complex
2009 StandoutNobel
Mechanism of Release and Fate of Excised Oligonucleotides during Nucleotide Excision Repair
2012 StandoutNobel
Human Mismatch Repair
2005 StandoutNobel
UV Light Potentiates STING (Stimulator of Interferon Genes)-dependent Innate Immune Signaling through Deregulation of ULK1 (Unc51-like Kinase 1)
2015 StandoutNobel
The Structural Basis for mRNA Recognition and Cleavage by the Ribosome-Dependent Endonuclease RelE
2009 StandoutNobel
An Integrated Approach for Analysis of the DNA Damage Response in Mammalian Cells
2015 StandoutNobel
The DNA-damage response in human biology and disease
2009 StandoutNature
Demethylation of 3-Methylthymine in DNA by Bacterial and Human DNA Dioxygenases
2004 StandoutNobel
BRCA1 Is Required for Postreplication Repair after UV-Induced DNA Damage
2011
Microbial electrosynthesis — revisiting the electrical route for microbial production
2010
The β Sliding Clamp Binds to Multiple Sites within MutL and MutS
2006 StandoutNobel
Mouse Rev1 protein interacts with multiple DNA polymerases involved in translesion DNA synthesis
2003
Eukaryotic DNA damage tolerance and translesion synthesis through covalent modifications of PCNA
2007
Catalytic and Noncatalytic Roles of the CtIP Endonuclease in Double-Strand Break End Resection
2014
Transcription-coupled DNA repair: two decades of progress and surprises
2008
Mutation as a Stress Response and the Regulation of Evolvability
2007
Fidelity and Processivity of DNA Synthesis by DNA Polymerase κ, the Product of the Human DINB1 Gene
2000
Miscoding Properties of 2′-Deoxyinosine, a Nitric Oxide-Derived DNA Adduct, during Translesion Synthesis Catalyzed by Human DNA Polymerases
2008
Crystal Structure of a DinB Lesion Bypass DNA Polymerase Catalytic Fragment Reveals a Classic Polymerase Catalytic Domain
2001 StandoutNobel
Hallmarks of aging: An expanding universe
2023 Standout
Mismatch repair and nucleotide excision repair proteins cooperate in the recognition of DNA interstrand crosslinks
2009 StandoutNobel
Misinsertion and bypass of thymine–thymine dimers by human DNA polymerase ι
2000
DNA repair mechanisms in dividing and non-dividing cells
2013
Mind the gap: Keeping UV lesions in check
2011
Cytotoxicity and mutagenicity of endogenous DNA base lesions as potential cause of human aging
2008
Hydrolytic function of Exo1 in mammalian mismatch repair
2014 StandoutNobel
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
2011 StandoutNatureNobel
Simultaneous Disruption of Two DNA Polymerases, Polη and Polζ, in Avian DT40 Cells Unmasks the Role of Polη in Cellular Response to Various DNA Lesions
2010
Transcription-coupled nucleotide excision repair in mammalian cells: molecular mechanisms and biological effects
2008
Crystal Structure of a Y-Family DNA Polymerase in Action
2001
Regulation of nucleotide excision repair activity by transcriptional and post-transcriptional control of the XPA protein
2010 StandoutNobel
Programmable base editing of A•T to G•C in genomic DNA without DNA cleavage
2017 StandoutNature
Pathophysiology of premature aging characteristics in Mendelian progeroid disorders
2020
The Structure of T. aquaticus DNA Polymerase III Is Distinct from Eukaryotic Replicative DNA Polymerases
2006 StandoutNobel
Transcriptome analysis of quorum-sensing regulation and virulence factor expression in Pseudomonas aeruginosa
2004
Dynamic RNA Modifications in Gene Expression Regulation
2017 Standout
Regulation of DNA repair throughout the cell cycle
2008
Structure-based interpretation of missense mutations in Y-family DNA polymerases and their implications for polymerase function and lesion bypass
2002
Functions of human DNA polymerases η, κ and ι suggested by their properties, including fidelity with undamaged DNA templates
2003
DNA Damage, Aging, and Cancer
2009 Standout
Bacterial toxin YafQ is an endoribonuclease that associates with the ribosome and blocks translation elongation through sequence‐specific and frame‐dependent mRNA cleavage
2009
Nucleotide Excision Repair in Human Cells
2013 StandoutNobel
Modulation of Pseudomonas aeruginosa gene expression by host microflora through interspecies communication
2003
Human DNA polymerase kappa synthesizes DNA with extraordinarily low fidelity
2000
Checkpoint activation regulates mutagenic translesion synthesis
2003
Large-Scale Mapping and Validation of Escherichia coli Transcriptional Regulation from a Compendium of Expression Profiles
2007
Error-free and error-prone lesion bypass by human DNA polymerase kappa in vitro
2000
Tyrosyl-DNA Phosphodiesterase 1 (TDP1) Repairs DNA Damage Induced by Topoisomerases I and II and Base Alkylation in Vertebrate Cells
2012
A Chromatin-Mediated Reversible Drug-Tolerant State in Cancer Cell Subpopulations
2010 Standout
RNA m6A methylation regulates the ultraviolet-induced DNA damage response
2017 Nature
Requirement of Non-canonical Activity of Uracil DNA Glycosylase for Class Switch Recombination
2006 StandoutNobel
Defining the position of the switches between replicative and bypass DNA polymerases
2004
One-Step Generation of Mice Carrying Mutations in Multiple Genes by CRISPR/Cas-Mediated Genome Engineering
2013 Standout
Regulation of the DNA Damage Response by DNA-PKcs Inhibitory Phosphorylation of ATM
2016
Coupling of Human DNA Excision Repair and the DNA Damage Checkpoint in a Defined in Vitro System
2014 StandoutNobel
Mechanism of Replication-Coupled DNA Interstrand Crosslink Repair
2008
Ecological and Evolutionary Forces Shaping Microbial Diversity in the Human Intestine
2006 Standout
The Small RNA IstR Inhibits Synthesis of an SOS-Induced Toxic Peptide
2004
Role of DNA polymerase   in the bypass of abasic sites in yeast cells
2004
Signal‐amplifying genetic circuit enables in vivo observation of weak promoter activation in the Rhl quorum sensing system
2005
The major human abasic endonuclease: formation, consequences and repair of abasic lesions in DNA
2001
DNA polymerases and human disease
2008
Attenuation of Pseudomonas aeruginosa virulence by quorum sensing inhibitors
2003
Engineering domain fusion chimeras from I-OnuI family LAGLIDADG homing endonucleases
2012 StandoutNobel
Structure of the Pseudomonas aeruginosa acyl‐homoserinelactone synthase LasI
2004
The Structural Mechanism of Translocation and Helicase Activity in T7 RNA Polymerase
2004 StandoutNobel
Comprehensive comparative-genomic analysis of Type 2 toxin-antitoxin systems and related mobile stress response systems in prokaryotes
2009
Poly(ADP-ribose) polymerase and XPF–ERCC1 participate in distinct pathways for the repair of topoisomerase I-induced DNA damage in mammalian cells
2011
Analysis of Ribonucleotide Removal from DNA by Human Nucleotide Excision Repair
2015 StandoutNobel
A Common Mechanism of Cellular Death Induced by Bactericidal Antibiotics
2007 Standout
Purification and Characterization of polκ, a DNA Polymerase Encoded by the Human DINB1 Gene
2001
The Translesion DNA Polymerase ζ Plays a Major Role in Ig and bcl-6 Somatic Hypermutation
2001
Exo1 Competes with Repair Synthesis, Converts NER Intermediates to Long ssDNA Gaps, and Promotes Checkpoint Activation
2010
Sociomicrobiology: the connections between quorum sensing and biofilms
2004
XPB and XPD helicases in TFIIH orchestrate DNA duplex opening and damage verification to coordinate repair with transcription and cell cycle via CAK kinase
2011
Removal of Misincorporated Ribonucleotides from Prokaryotic Genomes: An Unexpected Role for Nucleotide Excision Repair
2013
DNA Repair Synthesis and Ligation Affect the Processing of Excised Oligonucleotides Generated by Human Nucleotide Excision Repair
2014 StandoutNobel
Effect of Translesion DNA Polymerases, Endonucleases and RpoS on Mutation Rates inSalmonella typhimurium
2010
Carboxy-terminal domain of AID required for its mRNA complex formation in vivo
2009 StandoutNobel
Unraveling the Complexities of DNA-Dependent Protein Kinase Autophosphorylation
2014
Accumulation of the FACT complex, as well as histone H3.3, serves as a target marker for somatic hypermutation
2013 StandoutNobel
Interference of mismatch and base excision repair during the processing of adjacent U/G mispairs may play a key role in somatic hypermutation
2009
QUORUM SENSING: Cell-to-Cell Communication in Bacteria
2005 Standout
Error-Prone Repair DNA Polymerases in Prokaryotes and Eukaryotes
2002
Conversion of Wastes into Bioelectricity and Chemicals by Using Microbial Electrochemical Technologies
2012 StandoutScience
Genomes in Focus: Development and Applications of CRISPR‐Cas9 Imaging Technologies
2017 StandoutNobel
THE SOS RESPONSE: Recent Insights into umuDC-Dependent Mutagenesis and DNA Damage Tolerance
2000
Processing of Damaged DNA Ends for Double-Strand Break Repair in Mammalian Cells
2012
Targeted nucleotide editing using hybrid prokaryotic and vertebrate adaptive immune systems
2016 StandoutScience
Formation and Repair of Interstrand Cross-Links in DNA
2005
Prokaryotic Nucleotide Excision Repair:  The UvrABC System
2006
PMS2 endonuclease activity has distinct biological functions and is essential for genome maintenance
2010 StandoutNobel
Eukaryotic DNA Polymerases
2002
Specificity of Acyl-Homoserine Lactone Synthases Examined by Mass Spectrometry
2005
Computer simulations of protein functions: Searching for the molecular origin of the replication fidelity of DNA polymerases
2005 StandoutNobel
Double-Strand Break End Resection and Repair Pathway Choice
2011
The Biochemistry of Somatic Hypermutation
2008
Differential regulation of S-region hypermutation and class-switch recombination by noncanonical functions of uracil DNA glycosylase
2014 StandoutNobel
Specialized DNA Polymerases, Cellular Survival, and the Genesis of Mutations
2002 Science
Human exonuclease 1 connects nucleotide excision repair (NER) processing with checkpoint activation in response to UV irradiation
2011
Restoration of ATM Expression in DNA-PKcs–Deficient Cells Inhibits Signal End Joining
2016
Simultaneous precise editing of multiple genes in human cells
2019 StandoutNobel
Targeted gene knock-in by homology-directed genome editing using Cas9 ribonucleoprotein and AAV donor delivery
2017 StandoutNobel
Error-Prone DNA Polymerases: When Making a Mistake is the Only Way to Get Ahead
2003
Preferential Incorporation of G Opposite Template T by the Low-Fidelity Human DNA Polymerase ι
2000
Circadian control of XPA and excision repair of cisplatin-DNA damage by cryptochrome and HERC2 ubiquitin ligase
2010 StandoutNobel
Utilization of Acyl-Homoserine Lactone Quorum Signals for Growth by a Soil Pseudomonad and Pseudomonas aeruginosa PAO1
2003
APE1 is dispensable for S-region cleavage but required for its repair in class switch recombination
2014 StandoutNobel
Activation-induced Deaminase (AID)-directed Hypermutation in the Immunoglobulin Sμ Region
2002 StandoutNobel
Engineered bidirectional communication mediates a consensus in a microbial biofilm consortium
2007 StandoutNobel
RecA-Dependent Recovery of Arrested DNA Replication Forks
2003
Molecular Mechanisms of Mammalian DNA Repair and the DNA Damage Checkpoints
2004 StandoutNobel
Microarray Analysis of Pseudomonas aeruginosa Quorum-Sensing Regulons: Effects of Growth Phase and Environment
2003
DNA polymerases and somatic hypermutation of immunoglobulin genes
2005

Works of Tomoo Ogi being referenced

Up-regulation of the error-prone DNA polymerase {kappa} promotes pleiotropic genetic alterations and tumorigenesis.
2005
Involvement of Vertebrate Polκ in Translesion DNA Synthesis across DNA Monoalkylation Damage
2005
Three DNA Polymerases, Recruited by Different Mechanisms, Carry Out NER Repair Synthesis in Human Cells
2010
Mammalian Pol κ: Regulation of its Expression and Lesion Substrates
2004
The absence of DNA polymerase κ does not affect somatic hypermutation of the mouse immunoglobulin heavy chain gene
2003
Collaborative Action of Brca1 and CtIP in Elimination of Covalent Modifications from Double-Strand Breaks to Facilitate Subsequent Break Repair
2010
PRKDC mutations in a SCID patient with profound neurological abnormalities
2013
Expression of human and mouse genes encoding polκ: testis‐specific developmental regulation and AhR‐dependent inducible transcription
2001
A rapid non-radioactive technique for measurement of repair synthesis in primary human fibroblasts by incorporation of ethynyl deoxyuridine (EdU)
2008
The Y-family DNA polymerase κ (pol κ) functions in mammalian nucleotide-excision repair
2006
Mutation enhancement by DINB1, a mammalian homologue of the Escherichia coli mutagenesis protein DinB
1999
Translesion synthesis: Y-family polymerases and the polymerase switch
2007
Up-Regulation of the Error-Prone DNA Polymerase κ Promotes Pleiotropic Genetic Alterations and Tumorigenesis
2005
Identification of additional genes belonging to the LexA regulon in Escherichia coli
2000
Error-prone bypass of certain DNA lesions by the human DNA polymerase κ
2000
Polκ protects mammalian cells against the lethal and mutagenic effects of benzo[ a ]pyrene
2002
Identification, Timing, and Signal Specificity ofPseudomonas aeruginosaQuorum-Controlled Genes: a Transcriptome Analysis
2003
Photosynthetic bio-fuel cells using cyanobacteria
1996
Functional and clinical relevance of novel mutations in a large cohort of patients with Cockayne syndrome
2018
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2026