Citation Impact
Citing Papers
Comprehensive computational design of ordered peptide macrocycles
2017 StandoutScienceNobel
LAMMPS - a flexible simulation tool for particle-based materials modeling at the atomic, meso, and continuum scales
2021 Standout
Overview of Mathematical Approaches Used to Model Bacterial Chemotaxis II: Bacterial Populations
2008
Switchable Helical Structures Formed by the Hierarchical Self‐Assembly of Laterally Tethered Nanorods
2009
The computational route from bilayer membranes to vesicle fusion
2006
Anchor extension: a structure-guided approach to design cyclic peptides targeting enzyme active sites
2021 StandoutNobel
Accurate sampling using Langevin dynamics
2007
Well-Tempered Metadynamics: A Smoothly Converging and Tunable Free-Energy Method
2008 Standout
Anisotropy of building blocks and their assembly into complex structures
2007 Standout
Computationally Designed Armadillo Repeat Proteins for Modular Peptide Recognition
2016 StandoutNobel
De novo design of buttressed loops for sculpting protein functions
2024 StandoutNobel
Hydrodynamic interactions and Brownian forces in colloidal suspensions: Coarse-graining over time and length scales
2006
Langevin Equation with Colored Noise for Constant-Temperature Molecular Dynamics Simulations
2009
Emerging applications of stimuli-responsive polymer materials
2010 Standout
Modeling of Polymer Structure and Conformations in Polymer Nanocomposites from Atomistic to Mesoscale: A Review
2016
On the numerical treatment of dissipative particle dynamics and related systems
2014
Computer Simulation of Liquids
2017 Standout
Multiscale Simulation of Soft Matter: From Scale Bridging to Adaptive Resolution
2007
A comparative study of the centroid and ring-polymer molecular dynamics methods for approximating quantum time correlation functions from path integrals
2009
Phase Diagrams of Self-Assembled Mono-Tethered Nanospheres from Molecular Simulation and Comparison to Surfactants
2005
A macromolecule in a solvent: Adaptive resolution molecular dynamics simulation
2007
Pore-scale imaging and modelling
2012 Standout
The MARTINI Coarse-Grained Force Field: Extension to Proteins
2008 Standout
Cryo-EM structure of the mechanically activated ion channel OSCA1.2
2018 StandoutNobel
Electrorheological Fluids: Mechanisms, Dynamics, and Microfluidics Applications
2011
GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation
2008 Standout
Thermal Conductivities of Molecular Liquids by Reverse Nonequilibrium Molecular Dynamics
2005
Modeling and simulation of pore‐scale multiphase fluid flow and reactive transport in fractured and porous media
2009
Aqueous Solvation Free Energies of Ions and Ion−Water Clusters Based on an Accurate Value for the Absolute Aqueous Solvation Free Energy of the Proton
2006 Standout
Investigating interactions of biomembranes and alcohols: A multiscale approach
2005
Poiseuille flow to measure the viscosity of particle model fluids
2005
Modeling of pH-Switchable Ion Transport and Selectivity in Nanopore Membranes with Fixed Charges
2003
Transport phenomena in nanofluidics
2008 Standout
ESPResSo—an extensible simulation package for research on soft matter systems
2006
Hyporheic flow and transport processes: Mechanisms, models, and biogeochemical implications
2014 Standout
Solvent-free simulations of fluid membrane bilayers
2003
Determination of Alkali and Halide Monovalent Ion Parameters for Use in Explicitly Solvated Biomolecular Simulations
2008 Standout
Strong influence of periodic boundary conditions on lateral diffusion in lipid bilayer membranes
2015
Static and dynamic properties of the interface between a polymer brush and a melt of identical chains
2006
Absolute Hydration Free Energy Scale for Alkali and Halide Ions Established from Simulations with a Polarizable Force Field
2006
The MARTINI Force Field: Coarse Grained Model for Biomolecular Simulations
2007 Standout
Biological and synthetic membranes: What can be learned from a coarse-grained description?
2006
General purpose molecular dynamics simulations fully implemented on graphics processing units
2008 Standout
Canonical sampling through velocity rescaling
2007 Standout
Understanding the Dynamics Behind the Photoisomerization of a Light-Driven Fluorene Molecular Rotary Motor
2010 StandoutNobel
Toward a mathematical theory of Keller–Segel models of pattern formation in biological tissues
2015 Standout
Soft Robotic Grippers
2018 Standout
GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers
2015 Standout
Application of X‐ray Microtomography and Image Processing to the Investigation of a Compacted Granular System
2006
Modeling flexible amphiphilic bilayers: A solvent-free off-lattice Monte Carlo study
2005
Integration schemes for dissipative particle dynamics simulations: From softly interacting systems towards hybrid models
2002
Adaptive resolution molecular-dynamics simulation: Changing the degrees of freedom on the fly
2005
g_mmpbsa—A GROMACS Tool for High-Throughput MM-PBSA Calculations
2014 Standout
Discrete particle simulation of particulate systems: A review of major applications and findings
2008 Standout
2013 Standout
Self-Assembly of Colloidal Nanocrystals: From Intricate Structures to Functional Materials
2016 Standout
Works of Thomas Soddemann being referenced
散逸粒子動力学:平衡および非平衡分子動力学シミュレーションのための有用なサーモスタット(原標題は英語)
2003
Dissipative particle dynamics: A useful thermostat for equilibrium and nonequilibrium molecular dynamics simulations
2003
Nonequilibrium molecular dynamics simulation of shear-induced alignment of amphiphilic model systems
2002
Structure of Poly(dimethylsiloxane) Melts: Theory, Simulation, and Experiment
2002
2001