Citation Impact
Citing Papers
A genomic region associated with protection against severe COVID-19 is inherited from Neandertals
2021 StandoutNobel
Limits of long-term selection against Neandertal introgression
2019 StandoutNobel
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
2010 Standout
The timing of human adaptation from Neanderthal introgression
2021
Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate
2013 Standout
The Genetic Cost of Neanderthal Introgression
2016
Denisovan ancestry and population history of early East Asians
2020 StandoutScienceNobel
Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns
2010 Standout
One thousand plant transcriptomes and the phylogenomics of green plants
2019 StandoutNature
A core gut microbiome in obese and lean twins
2008 StandoutNature
Ancient Fennoscandian genomes reveal origin and spread of Siberian ancestry in Europe
2018 StandoutNobel
An Expanded View of Complex Traits: From Polygenic to Omnigenic
2017 Standout
STRING v9.1: protein-protein interaction networks, with increased coverage and integration
2012 Standout
Dietary emulsifiers impact the mouse gut microbiota promoting colitis and metabolic syndrome
2015 StandoutNature
Proboscidean Mitogenomics: Chronology and Mode of Elephant Evolution Using Mastodon as Outgroup
2007
Precision microbiome reconstitution restores bile acid mediated resistance to Clostridium difficile
2014 StandoutNature
FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments
2010 Standout
The Pfam Protein Families Database
2002 Standout
The genomic landscape of Neanderthal ancestry in present-day humans
2014 StandoutNatureNobel
Detecting ancient positive selection in humans using extended lineage sorting
2017
STRING v10: protein–protein interaction networks, integrated over the tree of life
2014 Standout
Hallmarks of aging: An expanding universe
2023 Standout
Viruses in the faecal microbiota of monozygotic twins and their mothers
2010 StandoutNature
Efficient Coalescent Simulation and Genealogical Analysis for Large Sample Sizes
2016
Widespread Genomic Signatures of Natural Selection in Hominid Evolution
2009
Consistency of Topological Moves Based on the Balanced Minimum Evolution Principle of Phylogenetic Inference
2009
Natural Selection in the Great Apes
2016
A mitochondrial genome sequence of a hominin from Sima de los Huesos
2013 StandoutNatureNobel
The Strength of Selection against Neanderthal Introgression
2016
Comparative primate genomics: emerging patterns of genome content and dynamics
2014
The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible
2016 Standout
Gene tree discordance, phylogenetic inference and the multispecies coalescent
2009
Host Remodeling of the Gut Microbiome and Metabolic Changes during Pregnancy
2012 Standout
Jumbled Genomes: Missing Apicomplexan Synteny
2011
FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix
2009 Standout
The nature of Neanderthal introgression revealed by 27,566 Icelandic genomes
2020 Nature
Systematic Evaluation of Molecular Networks for Discovery of Disease Genes
2018
Human diseases through the lens of network biology
2012
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
2012 Standout
A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing
2015 StandoutNature
2007 Standout
Relaxed Neighbor Joining: A Fast Distance-Based Phylogenetic Tree Construction Method
2006
Comparative Population Genomics of the Ejaculate in Humans and the Great Apes
2013 StandoutNobel
Unified modeling of gene duplication, loss, and coalescence using a locus tree
2012
Evolutionary History of Chimpanzees Inferred from Complete Mitochondrial Genomes
2010
The major genetic risk factor for severe COVID-19 is inherited from Neanderthals
2020 StandoutNatureNobel
Bonobos Fall within the Genomic Variation of Chimpanzees
2011 StandoutNobel
Fast and flexible simulation of DNA sequence data
2008
Microbiota Modulate Behavioral and Physiological Abnormalities Associated with Neurodevelopmental Disorders
2013 Standout
Prioritizing candidate disease genes by network-based boosting of genome-wide association data
2011
Removal of deaminated cytosines and detection of in vivo methylation in ancient DNA
2009 StandoutNobel
Inference of human population history from individual whole-genome sequences
2011 StandoutNature
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
2010 Standout
A Revised Timescale for Human Evolution Based on Ancient Mitochondrial Genomes
2013 StandoutNobel
GenGIS 2: Geospatial Analysis of Traditional and Genetic Biodiversity, with New Gradient Algorithms and an Extensible Plugin Framework
2013
The Human Condition—A Molecular Approach
2014 StandoutNobel
Role for protein–protein interaction databases in human genetics
2009
Organoid single-cell genomic atlas uncovers human-specific features of brain development
2019 StandoutNatureNobel
Linkage disequilibrium in wild French grapevine, Vitis vinifera L. subsp. silvestris
2009
Human gene correlation analysis (HGCA): A tool for the identification of transcriptionally co-expressed genes
2012
Genetic structure and domestication history of the grape
2011 Standout
TreeCmp: Comparison of Trees in Polynomial Time
2012
Immuno-Navigator, a batch-corrected coexpression database, reveals cell type-specific gene networks in the immune system
2016 StandoutNobel
Does horizontal transmission invalidate cultural phylogenies?
2009
Fine-Scale Genetic Structure in Finland
2017
Excavating Neandertal and Denisovan DNA from the genomes of Melanesian individuals
2016 StandoutScienceNobel
Biological mechanisms of aging predict age‐related disease co‐occurrence in patients
2022
Mapping the Origins and Expansion of the Indo-European Language Family
2012 StandoutScience
To Include or Not to Include: The Impact of Gene Filtering on Species Tree Estimation Methods
2017
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
2018 Standout
Nuclear and mitochondrial DNA sequences from two Denisovan individuals
2015 StandoutNobel
Clearcut: a fast implementation of relaxed neighbor joining
2006
Insect decline in the Anthropocene: Death by a thousand cuts
2021 Standout
Archaeological evidence for two separate dispersals of Neanderthals into southern Siberia
2020
A high-coverage Neandertal genome from Chagyrskaya Cave
2020 StandoutNobel
The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets
2020 Standout
Genetic Variation in Pan Species Is Shaped by Demographic History and Harbors Lineage-Specific Functions
2019
The makers of the Protoaurignacian and implications for Neandertal extinction
2015 StandoutScienceNobel
Palaeoproteomic evidence identifies archaic hominins associated with the Châtelperronian at the Grotte du Renne
2016 StandoutNobel
Generation times in wild chimpanzees and gorillas suggest earlier divergence times in great ape and human evolution
2012 StandoutNobel
Accurate proteome-wide missense variant effect prediction with AlphaMissense
2023 StandoutScienceNobel
Works of Thomas Mailund being referenced
CoaSim: A flexible environment for simulating genetic data under coalescent models
2005
A sub-cubic time algorithm for computing the quartet distance between two general trees
2011
A fine-scale recombination map of the human–chimpanzee ancestor reveals faster change in humans than in chimpanzees and a strong impact of GC-biased gene conversion
2013
Identifying loci under positive selection in complex population histories
2019
Genomic Relationships and Speciation Times of Human, Chimpanzee, and Gorilla Inferred from a Coalescent Hidden Markov Model
2007
Strong Selective Sweeps on the X Chromosome in the Human-Chimpanzee Ancestor Explain Its Low Divergence
2015
Incomplete lineage sorting patterns among human, chimpanzee, and orangutan suggest recent orangutan speciation and widespread selection
2011
Cultural Phylogenetics of the Tupi Language Family in Lowland South America
2012
Using biological networks to search for interacting loci in genome-wide association studies
2009
Recrafting the neighbor-joining method
2006
Direct estimation of mutations in great apes reconciles phylogenetic dating
2019
A New Isolation with Migration Model along Complete Genomes Infers Very Different Divergence Processes among Closely Related Great Ape Species
2012
Fast calculation of the quartet distance between trees of arbitrary degrees
2006
Inference of Purifying and Positive Selection in Three Subspecies of Chimpanzees (Pan troglodytes) from Exome Sequencing
2015
The effective size of the Icelandic population and the prospects for LD mapping: inference from unphased microsatellite markers
2006
Nationwide Genomic Study in Denmark Reveals Remarkable Population Homogeneity
2016
Ancestral Population Genomics: The Coalescent Hidden Markov Model Approach
2009
Identifying disease associated genes by network propagation
2014
QuickJoin—fast neighbour-joining tree reconstruction
2004
QDist—quartet distance between evolutionary trees
2004
Extensive X-linked adaptive evolution in central chimpanzees
2012