Citation Impact
Citing Papers
ShinyGO: a graphical gene-set enrichment tool for animals and plants
2019 Standout
Oxidative Stress
2017 Standout
Protein interaction networks revealed by proteome coevolution
2019 StandoutScienceNobel
Removing T-cell epitopes with computational protein design
2014 StandoutNobel
TIMER: A Web Server for Comprehensive Analysis of Tumor-Infiltrating Immune Cells
2017 Standout
Characterization of the immunophenotypes and antigenomes of colorectal cancers reveals distinct tumor escape mechanisms and novel targets for immunotherapy
2015
NetMHCpan-4.0: Improved Peptide–MHC Class I Interaction Predictions Integrating Eluted Ligand and Peptide Binding Affinity Data
2017
Deep learning pan‐specific model for interpretable MHC‐I peptide binding prediction with improved attention mechanism
2021
DISEASES: Text mining and data integration of disease–gene associations
2014
High sensitivity of cancer exome-based CD8 T cell neo-antigen identification
2014
Determining cell type abundance and expression from bulk tissues with digital cytometry
2019 Standout
A Systematic Assessment of MHC Class II Peptide Binding Predictions and Evaluation of a Consensus Approach
2008
Elements of cancer immunity and the cancer–immune set point
2017 StandoutNature
Induction of group VIA phospholipase A2activity during in vitro ischemia in C2C12 myotubes is associated with changes in the level of its splice variants
2007
Avelumab in metastatic urothelial carcinoma after platinum failure (JAVELIN Solid Tumor): pooled results from two expansion cohorts of an open-label, phase 1 trial
2017
Accurate Prediction of Peptide Binding Sites on Protein Surfaces
2009
Insertion-and-deletion-derived tumour-specific neoantigens and the immunogenic phenotype: a pan-cancer analysis
2017
mRNA vaccines — a new era in vaccinology
2018 StandoutNobel
Innate and adaptive immune cells in the tumor microenvironment
2013 Standout
STRING v10: protein–protein interaction networks, integrated over the tree of life
2014 Standout
Clonal Heterogeneity and Tumor Evolution: Past, Present, and the Future
2017 Standout
Understanding the tumor immune microenvironment (TIME) for effective therapy
2018 Standout
Mining exomic sequencing data to identify mutated antigens recognized by adoptively transferred tumor-reactive T cells
2013
The dynamic disulphide relay of quiescin sulphydryl oxidase
2012 StandoutNatureNobel
Developing neoantigen-targeted T cell–based treatments for solid tumors
2019
Systemic sclerosis
2017 Standout
TCM-Mesh: The database and analytical system for network pharmacology analysis for TCM preparations
2017
New insights into the mechanisms of epithelial–mesenchymal transition and implications for cancer
2018 Standout
STITCH 5: augmenting protein–chemical interaction networks with tissue and affinity data
2015
Tumor-Associated Macrophages: From Mechanisms to Therapy
2014 Standout
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
2015 Standout
The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible
2016 Standout
T-cell immunity of SARS-CoV: Implications for vaccine development against MERS-CoV
2016
Molecular and Genetic Properties of Tumors Associated with Local Immune Cytolytic Activity
2015 Standout
Properties of MHC Class I Presented Peptides That Enhance Immunogenicity
2013
Peptide binding predictions for HLA DR, DP and DQ molecules
2010
Sources of diversity in T cell epitope discovery
2011
Clinical course and outcomes of critically ill patients with SARS-CoV-2 pneumonia in Wuhan, China: a single-centered, retrospective, observational study
2020 Standout
The human PDI family: Versatility packed into a single fold
2007
Epidemiological and clinical characteristics of 99 cases of 2019 novel coronavirus pneumonia in Wuhan, China: a descriptive study
2020 Standout
Genetics of systemic sclerosis
2015
Atezolizumab versus docetaxel for patients with previously treated non-small-cell lung cancer (POPLAR): a multicentre, open-label, phase 2 randomised controlled trial
2016 Standout
MHC Class II epitope predictive algorithms
2010
NetMHCIIpan-2.0 - Improved pan-specific HLA-DR predictions using a novel concurrent alignment and weight optimization training procedure
2010
Mechanism-driven biomarkers to guide immune checkpoint blockade in cancer therapy
2016 Standout
Predicting HLA CD4 Immunogenicity in Human Populations
2018
Primary, Adaptive, and Acquired Resistance to Cancer Immunotherapy
2017 Standout
Targets of T Cell Responses to SARS-CoV-2 Coronavirus in Humans with COVID-19 Disease and Unexposed Individuals
2020 Standout
In silico methods to address polypharmacology: current status, applications and future perspectives
2015
Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19
2020 Standout
Computationally Designed Armadillo Repeat Proteins for Modular Peptide Recognition
2016 StandoutNobel
Functional classification of class II human leukocyte antigen (HLA) molecules reveals seven different supertypes and a surprising degree of repertoire sharing across supertypes
2011
Pan-cancer Immunogenomic Analyses Reveal Genotype-Immunophenotype Relationships and Predictors of Response to Checkpoint Blockade
2017 Standout
GPx8 peroxidase prevents leakage of H2O2 from the endoplasmic reticulum
2014
The prognostic landscape of genes and infiltrating immune cells across human cancers
2015 Standout
The NGS WikiBook: a dynamic collaborative online training effort with long-term sustainability
2013
A guide to cancer immunotherapy: from T cell basic science to clinical practice
2020 Standout
Human FOXP3+ Regulatory T Cell Heterogeneity and Function in Autoimmunity and Cancer
2019 StandoutNobel
Signatures of T cell dysfunction and exclusion predict cancer immunotherapy response
2018 Standout
The Human Cancer Antigen Mesothelin Is More Efficiently Presented to the Mouse Immune System when Targeted to the DEC‐205/CD205 Receptor on Dendritic Cells
2009 StandoutNobel
Improved Prediction of MHC II Antigen Presentation through Integration and Motif Deconvolution of Mass Spectrometry MHC Eluted Ligand Data
2020
TIMER2.0 for analysis of tumor-infiltrating immune cells
2020 Standout
Adoptive cell transfer as personalized immunotherapy for human cancer
2015 StandoutScience
DeepLigand: accurate prediction of MHC class I ligands using peptide embedding
2019
Large-scale characterization of peptide-MHC binding landscapes with structural simulations
2011
Nanotechnology for Multimodal Synergistic Cancer Therapy
2017 Standout
Peptide-binding specificity prediction using fine-tuned protein structure prediction networks
2023 StandoutNobel
SwissTargetPrediction: updated data and new features for efficient prediction of protein targets of small molecules
2019 Standout
Chemotherapy induces enrichment of CD47 + /CD73 + /PDL1 + immune evasive triple-negative breast cancer cells
2018 StandoutNobel
Immunogenicity of somatic mutations in human gastrointestinal cancers
2015 Science
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
2018 Standout
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
2018 Standout
Targeting the Heterogeneity of Cancer with Individualized Neoepitope Vaccines
2016
ETCM: an encyclopaedia of traditional Chinese medicine
2018 Standout
Detection of T cell responses to a ubiquitous cellular protein in autoimmune disease
2014 StandoutScienceNobel
Computational polypharmacology: a new paradigm for drug discovery
2017
Neoantigens in cancer immunotherapy
2015 StandoutScience
Divergent Motifs but Overlapping Binding Repertoires of Six HLA-DQ Molecules Frequently Expressed in the Worldwide Human Population
2010
Phospholipase A2Enzymes: Physical Structure, Biological Function, Disease Implication, Chemical Inhibition, and Therapeutic Intervention
2011 Standout
TepiTool: A Pipeline for Computational Prediction of T Cell Epitope Candidates
2016
NetMHCpan-4.1 and NetMHCIIpan-4.0: improved predictions of MHC antigen presentation by concurrent motif deconvolution and integration of MS MHC eluted ligand data
2020
The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets
2020 Standout
Cancer immunotherapy using checkpoint blockade
2018 StandoutScience
Trimmomatic: a flexible trimmer for Illumina sequence data
2014 Standout
Recombinant immunotoxin for cancer treatment with low immunogenicity by identification and silencing of human T-cell epitopes
2014 StandoutNobel
Works of Thomas Blicher being referenced
Identification and Characterization of a Novel Thioredoxin-related Transmembrane Protein of the Endoplasmic Reticulum
2004
NetMHCIIpan-3.0, a common pan-specific MHC class II prediction method including all three human MHC class II isotypes, HLA-DR, HLA-DP and HLA-DQ
2013
Structure-Function Analysis of the Endoplasmic Reticulum Oxidoreductase TMX3 Reveals Interdomain Stabilization of the N-terminal Redox-active Domain
2007
STITCH 4: integration of protein–chemical interactions with user data
2013
High-resolution structure of HLA-A*1101 in complex with SARS nucleocapsid peptide
2005
Quantitative Predictions of Peptide Binding to Any HLA-DR Molecule of Known Sequence: NetMHCIIpan
2008
NetMHCpan, a Method for Quantitative Predictions of Peptide Binding to Any HLA-A and -B Locus Protein of Known Sequence
2007
Bioinformatics training: a review of challenges, actions and support requirements
2010
Establishment of a quantitative ELISA capable of determining peptide – MHC class I interaction
2002