Citation Impact
Citing Papers
Human cerebral organoids recapitulate gene expression programs of fetal neocortex development
2015 StandoutNobel
Generation of knock-in primary human T cells using Cas9 ribonucleoproteins
2015 StandoutNobel
Novel fluorescent genome editing reporters for monitoring DNA repair pathway utilization at endonuclease-induced breaks
2013
A noninflammatory mRNA vaccine for treatment of experimental autoimmune encephalomyelitis
2021 StandoutScienceNobel
The dynamics of gene expression in vertebrate embryogenesis at single-cell resolution
2018 Science
RNA-Guided Human Genome Engineering via Cas9
2013 StandoutScience
Trained immunity: A program of innate immune memory in health and disease
2016 StandoutScience
Nuclear Lamin-A Scales with Tissue Stiffness and Enhances Matrix-Directed Differentiation
2013 StandoutScience
Joint profiling of chromatin accessibility and gene expression in thousands of single cells
2018 Science
Multiplex single-cell profiling of chromatin accessibility by combinatorial cellular indexing
2015 Science
Probing the target search of DNA-binding proteins in mammalian cells using TetR as model searcher
2015
High-resolution genome-wide mapping of HIF-binding sites by ChIP-seq
2011 StandoutNobel
Genome-wide features of neuroendocrine regulation in Drosophila by the basic helix-loop-helix transcription factor DIMMED
2015 StandoutNobel
Hierarchical Mechanisms for Direct Reprogramming of Fibroblasts to Neurons
2013 StandoutNobel
Genetic and Epigenetic Determinants of Neurogenesis and Myogenesis
2012
Bhlhe40 controls cytokine production by T cells and is essential for pathogenicity in autoimmune neuroinflammation
2014
The role of chromatin accessibility in directing the widespread, overlapping patterns of Drosophila transcription factor binding
2011
Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors
2012
Hypoxia-Inducible Factors in Physiology and Medicine
2012 StandoutNobel
An integrated encyclopedia of DNA elements in the human genome
2012 StandoutNature
Tuning the Transcriptional Response to Hypoxia by Inhibiting Hypoxia-inducible Factor (HIF) Prolyl and Asparaginyl Hydroxylases
2016 StandoutNobel
Plasticity of TH17 cells in Peyer's patches is responsible for the induction of T cell–dependent IgA responses
2013
Functions of DNA methylation: islands, start sites, gene bodies and beyond
2012 Standout
Determinants and dynamics of genome accessibility
2011
Genome-wide protein–DNA binding dynamics suggest a molecular clutch for transcription factor function
2012 Nature
The microbiota in adaptive immune homeostasis and disease
2016 StandoutNature
The SIN3A histone deacetylase complex is required for a complete transcriptional response to hypoxia
2017 StandoutNobel
Systematic identification and annotation of human methylation marks based on bisulfite sequencing methylomes reveals distinct roles of cell type-specific hypomethylation in the regulation of cell identity genes
2015
Rapid accessibility of nucleosomal DNA in yeast on a second time scale
2006
Synthetic biology: applications come of age
2010
HIF-1 mediates metabolic responses to intratumoral hypoxia and oncogenic mutations
2013 StandoutNobel
Functional neurogenesis in the adult hippocampus
2002 StandoutNature
Extensive chromatin remodelling and establishment of transcription factor ‘hotspots’ during early adipogenesis
2011
Quantifying transcription factor kinetics: At work or at play?
2013
Uncovering cis-regulatory sequence requirements for context-specific transcription factor binding
2012
Origins of Metastatic Traits
2013
Nuclear Receptor DHR4 Controls the Timing of Steroid Hormone Pulses During Drosophila Development
2011
T Follicular Helper Cell Differentiation, Function, and Roles in Disease
2014
SWI/SNF nucleosome remodellers and cancer
2011 Standout
Differential oestrogen receptor binding is associated with clinical outcome in breast cancer
2012 StandoutNature
Transcription Dynamics
2009
Single-Molecule Dynamics of Enhanceosome Assembly in Embryonic Stem Cells
2014 StandoutNobel
Hypoxia drives glucose transporter 3 expression through hypoxia-inducible transcription factor (HIF)–mediated induction of the long noncoding RNA NICI
2019 StandoutNobel
The single-cell transcriptional landscape of mammalian organogenesis
2019 StandoutNature
Power-Law Rheology of Isolated Nuclei with Deformation Mapping of Nuclear Substructures
2005
CRISPR Reveals a Distal Super-Enhancer Required for Sox2 Expression in Mouse Embryonic Stem Cells
2014
Foxp3 Exploits a Pre-Existent Enhancer Landscape for Regulatory T Cell Lineage Specification
2012
Intrinsic Immunity Shapes Viral Resistance of Stem Cells
2017 StandoutNobel
Remodeling of the Enhancer Landscape during Macrophage Activation Is Coupled to Enhancer Transcription
2013
Pioneer transcription factors: establishing competence for gene expression
2011
Expansion of the eukaryotic proteome by alternative splicing
2010 StandoutNature
ChIP‐Seq of ERα and RNA polymerase II defines genes differentially responding to ligands
2009
The Role of Chromatin during Transcription
2007 Standout
The HPA axis in major depression: classical theories and new developments
2008 Standout
Comprehensive identification and analysis of human accelerated regulatory DNA
2015
Transcription factors: from enhancer binding to developmental control
2012 Standout
Understanding transcriptional regulation by integrative analysis of transcription factor binding data
2012
Comprehensive Genome-wide Protein-DNA Interactions Detected at Single-Nucleotide Resolution
2011
The Neuroendocrinology of Stress: A Never Ending Story
2008 Standout
Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer
2013 Standout
Absence of a simple code: how transcription factors read the genome
2014
Metastatic colonization by circulating tumour cells
2016 StandoutNature
Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation
2013 StandoutNature
A high-resolution map of the three-dimensional chromatin interactome in human cells
2013 Nature
Latent Enhancers Activated by Stimulation in Differentiated Cells
2013
Comprehensive Integration of Single-Cell Data
2019 Standout
The molecular neurobiology of depression
2008 StandoutNature
A Unique Microglia Type Associated with Restricting Development of Alzheimer’s Disease
2017 Standout
A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping
2014 Standout
hnRNP Proteins and Splicing Control
2007
Molecular Roadblocks for Cellular Reprogramming
2012
CLOCK:BMAL1 is a pioneer-like transcription factor
2014 StandoutNobel
Organoid single-cell genomic atlas uncovers human-specific features of brain development
2019 StandoutNatureNobel
Control of adaptive immunity by the innate immune system
2015 Standout
Dynamic regulation of transcriptional states by chromatin and transcription factors
2013
Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes
2013 Standout
Histone acetylation characterizes chromatin presetting by NF1 and Oct1 and enhances glucocorticoid receptor binding to the MMTV promoter
2009
Dynamics of CRISPR-Cas9 genome interrogation in living cells
2015 StandoutScienceNobel
Disentangling the Many Layers of Eukaryotic Transcriptional Regulation
2012
Increasing the affinity of selective bZIP‐binding peptides through surface residue redesign
2014
Inactivation of the PBRM1 tumor suppressor gene amplifies the HIF-response in VHL −/− clear cell renal carcinoma
2017 StandoutNobel
Genomes in Focus: Development and Applications of CRISPR‐Cas9 Imaging Technologies
2017 StandoutNobel
Reconstructing the DNA Methylation Maps of the Neandertal and the Denisovan
2014 StandoutScienceNobel
De novo design of protein homo-oligomers with modular hydrogen-bond network–mediated specificity
2016 StandoutScienceNobel
Progressive engineering of a homing endonuclease genome editing reagent for the murine X-linked immunodeficiency locus
2014 StandoutNobel
megaTALs: a rare-cleaving nuclease architecture for therapeutic genome engineering
2013 StandoutNobel
Antiinflammatory Action of Glucocorticoids — New Mechanisms for Old Drugs
2005 Standout
Metabolic reprogramming and cancer progression
2020 StandoutScience
Characterization of somatic cell nuclear reprogramming by oocytes in which a linker histone is required for pluripotency gene reactivation
2010 StandoutNobel
Identification of novel markers for mouse CD 4+T follicular helper cells
2013 StandoutNobel
Helper T‐cell identity and evolution of differential transcriptomes and epigenomes
2013
A distinct subpopulation of CD25−T-follicular regulatory cells localizes in the germinal centers
2017 StandoutNobel
Works of Thomas A. Johnson being referenced
Overlapping chromatin-remodeling systems collaborate genome wide at dynamic chromatin transitions
2013
Dynamics of nuclear receptor movement and transcription
2003
Interaction of the Glucocorticoid Receptor with the Chromatin Landscape
2008
DNA methylation status predicts cell type‐specific enhancer activity
2011
Dynamic Exchange at Regulatory Elements during Chromatin Remodeling Underlies Assisted Loading Mechanism
2011
Ultradian hormone stimulation induces glucocorticoid receptor-mediated pulses of gene transcription
2009
Chromatin accessibility pre-determines glucocorticoid receptor binding patterns
2011
Transcription Factor AP1 Potentiates Chromatin Accessibility and Glucocorticoid Receptor Binding
2011
Subnuclear Trafficking and Gene Targeting by Steroid Receptors
2004
Early Th1 Cell Differentiation Is Marked by a Tfh Cell-like Transition
2011
Kinetic Complexity of the Global Response to Glucocorticoid Receptor Action
2009
Chromatin Remodeling Complexes Interact Dynamically with a Glucocorticoid Receptor–regulated Promoter
2008
Combinatorial probabilistic chromatin interactions produce transcriptional heterogeneity
2009