Standout Papers

DADA2: High-resolution sample inference from Illumina amplicon data 2013 2026 2017 2021 20.7k
  1. DADA2: High-resolution sample inference from Illumina amplicon data (2016)
    Benjamin J. Callahan, Paul J. McMurdie et al. Nature Methods
  2. phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data (2013)
    Paul J. McMurdie, Susan Holmes PLoS ONE
  3. Exact sequence variants should replace operational taxonomic units in marker-gene data analysis (2017)
    Benjamin J. Callahan, Paul J. McMurdie et al. The ISME Journal
  4. Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible (2014)
    Paul J. McMurdie, Susan Holmes PLoS Computational Biology
  5. Simple statistical identification and removal of contaminant sequences in marker-gene and metagenomics data (2018)
    Nicole M. Davis, Diana M. Proctor et al. Microbiome
  6. Temporal and spatial variation of the human microbiota during pregnancy (2015)
    Daniel B. DiGiulio, Benjamin J. Callahan et al. Proceedings of the National Academy of Sciences
  7. Bootstrap confidence levels for phylogenetic trees. (1996)
    B. Efron, Elizabeth Halloran et al. Proceedings of the National Academy of Sciences
  8. Advancing Our Understanding of the Human Microbiome Using QIIME (2013)
    José A. Navas-Molina, Juan Manuel Peralta‐Sánchez et al. Methods in enzymology on CD-ROM/Methods in enzymology
  9. Replication and refinement of a vaginal microbial signature of preterm birth in two racially distinct cohorts of US women (2017)
    Benjamin J. Callahan, Daniel B. DiGiulio et al. Proceedings of the National Academy of Sciences

Immediate Impact

2 by Nobel laureates 40 from Science/Nature 92 standout
Sub-graph 1 of 20

Citing Papers

Gut microbiota carcinogen metabolism causes distal tissue tumours
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Works of Susan Holmes being referenced

DADA2: High-resolution sample inference from Illumina amplicon data
2016 Standout

Author Peers

Author Last Decade Papers Cites
Susan Holmes 22965 4323 603 13264 6499 180 50.2k
Patrick D. Schloss 22101 3757 200 13734 4542 196 43.0k
J. Gregory Caporaso 27468 4260 260 18178 7614 122 55.7k
Catherine Lozupone 27665 5618 202 12162 4936 103 47.5k
José C. Clemente 21443 4792 65 7930 3655 131 37.3k
Frank Oliver Glöckner 27457 2625 95 24693 7483 155 55.1k
Dirk Gevers 25598 6258 168 7264 3668 94 41.4k
Gary L. Andersen 15405 1879 136 10424 4625 210 33.7k
Jack A. Gilbert 17518 2232 123 13334 4855 377 37.7k
Mitchell L. Sogin 22592 3617 114 15364 2627 211 38.2k
Christopher Quince 16684 2109 177 13644 4729 109 33.4k

All Works

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2026