Citation Impact

Citing Papers

On the relationship between folding and chemical landscapes in enzyme catalysis
2008 StandoutNobel
Formylglycine-generating enzyme binds substrate directly at a mononuclear Cu(I) center to initiate O 2 activation
2019 StandoutNobel
Catalysis by dihydrofolate reductase and other enzymes arises from electrostatic preorganization, not conformational motions
2011 StandoutNobel
Folding DNA to create nanoscale shapes and patterns
2006 StandoutNature
The dynamics of partially extended single molecules of DNA
1997 StandoutNatureNobel
The open pore conformation of potassium channels
2002 StandoutNatureNobel
Structure and dynamics of a fluorescent DNA oligomer containing the EcoRI recognition sequence: fluorescence, molecular dynamics, and NMR studies
1989
NMR structure of the mouse prion protein domain PrP(121–231)
1996 StandoutNatureNobel
Faster superoxide dismutase mutants designed by enhancing electrostatic guidance
1992 Nature
Acetylcholinesterase: electrostatic steering increases the rate of ligand binding
1993
Evolutionary conservativeness of electric field in the Cu,Zn superoxide dismutase active site
1992
DNA double-crossover molecules
1993
Solid–Vapor Sorption of Xylenes: Prioritized Selectivity as a Means of Separating All Three Isomers Using a Single Substrate
2012
Dependence of the torsional rigidity of DNA on base composition
1990 Nature
UCSF Chimera—A visualization system for exploratory research and analysis
2004 Standout
Studies of DNA Organization in Hydrated Spermidine-Condensed DNA Toruses and Spermidine-DNA Fibres
1984
Treatment of electrostatic effects in proteins: Multigrid‐based newton iterative method for solution of the full nonlinear poisson–boltzmann equation
1994
Focusing of electric fields in the active site of Cu‐Zn superoxide dismutase: Effects of ionic strength and amino‐acid modification
1986
Treatment of electrostatic effects in macromolecular modeling
1989
Dynamics of biochemical and biophysical reactions: insight from computer simulations
2001 StandoutNobel
The chemical repertoire of natural ribozymes
2002 StandoutNatureNobel
Isotherms of individual pores by gas adsorption crystallography
2019 StandoutNobel
Extra adsorption and adsorbate superlattice formation in metal-organic frameworks
2015 StandoutNatureNobel
Relaxation of a Single DNA Molecule Observed by Optical Microscopy
1994 StandoutScienceNobel
Reply to Karplus: Conformational dynamics have no role in the chemical step
2010 StandoutNobel
SITE-SPECIFIC DYNAMICS IN DNA:Experiments
1997
Adaptive multilevel finite element solution of the Poisson-Boltzmann equation I. Algorithms and examples
2000
Dynamical Contributions to Enzyme Catalysis:  Critical Tests of A Popular Hypothesis
2006 StandoutNobel
Simulation of the diffusion‐controlled reaction between superoxide and superoxide dismutase. II. Detailed models
1988
MECHANISTIC ASPECTS OF ENZYMATIC CATALYSIS: Lessons from Comparison of RNA and Protein Enzymes
1997
Electrostatics and diffusion of molecules in solution: simulations with the University of Houston Brownian Dynamics program
1995
Energetics and Dynamics of Enzymatic Reactions
2001 StandoutNobel
Pillar[5]arene as a Co-Factor in Templating Rotaxane Formation
2013 StandoutNobel
Mutant Potassium Channels with Altered Binding of Charybdotoxin, a Pore-Blocking Peptide Inhibitor
1989 StandoutScienceNobel
An electrostatic mechanism for substrate guidance down the aromatic gorge of acetylcholinesterase.
1993
Ketosteroid isomerase provides further support for the idea that enzymes work by electrostatic preorganization
2010 StandoutNobel
A new paradigm for electrostatic catalysis of radical reactions in vitamin B 12 enzymes
2007 StandoutNobel
Supramolecular Chemistry: Receptors, Catalysts, and Carriers
1985 StandoutScienceNobel
Inclusion compounds ?Past, present, and future
1983
Adaptive multilevel finite element solution of the Poisson-Boltzmann equation II. Refinement at solvent-accessible surfaces in biomolecular systems
2000
Femtosecond dynamics of the DNA intercalator ethidium and electron transfer with mononucleotides in water
1999 StandoutNobel
Classical Electrostatics in Biology and Chemistry
1995 StandoutScience
Computer Simulations of the Diffusion of a Substrate to an Active Site of an Enzyme
1987 Science
Robust Molecular Crystals of Titanium(IV)-oxo-Carboxylate Clusters Showing Water Stability and CO2 Sorption Capability
2014
Apparent NAC Effect in Chorismate Mutase Reflects Electrostatic Transition State Stabilization
2003 StandoutNobel
Computer Simulation of the Chemical Catalysis of DNA Polymerases:  Discriminating between Alternative Nucleotide Insertion Mechanisms for T7 DNA Polymerase
2003 StandoutNobel
Carbohydrate-Mediated Purification of Petrochemicals
2015 StandoutNobel
Finite element approach to the electrostatics of macromolecules with arbitrary geometries
1993
Torsion and bending of nucleic acids studied by subnanosecond time-resolved fluorescence depolarization of intercalated dyes
1982 StandoutNobel
Electrostatic attraction by surface charge does not contribute to the catalytic efficiency of acetylcholinesterase.
1994
How Much Do Enzymes Really Gain by Restraining Their Reacting Fragments?
2002 StandoutNobel
Simulations of the Large Kinetic Isotope Effect and the Temperature Dependence of the Hydrogen Atom Transfer in Lipoxygenase
2004 StandoutNobel
Nanosecond fluorescence from isolated photosynthetic reaction centers of Rhodopseudomonas sphaeroides
1984
Temperature dependence of the dynamic light scattering of linear ϕ29 DNA: Implications for spontaneous opening of the double‐helix
1983
Torsional Rigidity of Positively and Negatively Supercoiled DNA
1992 Science
Substrate steering by electrostatic fields of enzymes: visualization by computer graphics
1986
Channeling by Proximity: The Catalytic Advantages of Active Site Colocalization Using Brownian Dynamics
2010
Nickel Superoxide Dismutase Structure and Mechanism
2004
Electrostatic Basis for Enzyme Catalysis
2006 StandoutNobel
Interdependency of the binding subsites in subtilisin
1992
Nonporous Titanium–Oxo Molecular Clusters That Reversibly and Selectively Adsorb Carbon Dioxide
2013
Bioinspired Metal–Organic Framework Catalysts for Selective Methane Oxidation to Methanol
2018 StandoutNobel
Living Ring-Opening Metathesis Polymerization in Aqueous Media Catalyzed by Well-Defined Ruthenium Carbene Complexes
1996 StandoutNobel
Design of a hyperstable 60-subunit protein icosahedron
2016 StandoutNatureNobel
The Chemistry and Applications of Metal-Organic Frameworks
2013 StandoutScienceNobel
Two-dimensional ordering of the DNA base guanine observed by scanning tunneling microscopy.
1991 StandoutNobel
Enzyme millisecond conformational dynamics do not catalyze the chemical step
2009 StandoutNobel
Origin of the Catalytic Power of Acetylcholinesterase:  Computer Simulation Studies
1998 StandoutNobel
The Cavity and Pore Helices in the KcsA K + Channel: Electrostatic Stabilization of Monovalent Cations
1999 StandoutScienceNobel
An Adaptable Peptide-Based Porous Material
2010 Science
Quantum Mechanical Continuum Solvation Models
2005 Standout
Direct Observation of Tube-Like Motion of a Single Polymer Chain
1994 StandoutScienceNobel
Portion-mixing peptide libraries of quenched fluorogenic substrates for complete subsite mapping of endoprotease specificity.
1994 StandoutNobel
Suppressing Brownian motion of individual biomolecules in solution
2006 StandoutNobel
Arylfluorosulfates Inactivate Intracellular Lipid Binding Protein(s) through Chemoselective SuFEx Reaction with a Binding Site Tyr Residue
2016 StandoutNobel
Spiers Memorial Lecture: : Progress and prospects of reticular chemistry
2017 StandoutNobel
A Titanium–Organic Framework as an Exemplar of Combining the Chemistry of Metal– and Covalent–Organic Frameworks
2016 StandoutNobel
Modular Design of Domain Assembly in Porous Coordination Polymer Crystals via Reactivity-Directed Crystallization Process
2012 StandoutNobel
DNA: A Model Compound for Solution Studies of Macromolecules
1991 Science
Dispersed Polaron Simulations of Electron Transfer in Photosynthetic Reaction Centers
1989 StandoutScienceNobel
Calculation of Dielectric Constants near Polyelectrolytes in Solution
1997
Time-resolved spectroscopy of macromolecules: Effect of helical structure on the torsional dynamics of DNA and RNA
1981 StandoutNobel
Electrostatics and diffusion of molecules in solution: simulations with the University of Houston Brownian dynamics program
1991
Self-Accelerating CO Sorption in a Soft Nanoporous Crystal
2013 StandoutScienceNobel
Femtosecond dynamics of DNA-mediated electron transfer
1999 StandoutNobel
Exploring challenges in rational enzyme design by simulating the catalysis in artificial kemp eliminase
2010 StandoutNobel

Works of Stuart A. Allison being referenced

Polyelectrolyte contribution to the persistence length of DNA
1981
Dynamic light‐scattering studies of internal motions in DNA. III. Evidence for titratable joints associated with bound polycations
1981
Point charge distributions and electrostatic steering in enzyme/substrate encounter: Brownian dynamics of modified copper/zinc superoxide dismutases
1990
Trajectory simulation studies of diffusion-controlled reactions
1987
Normal mode theory for the Brownian dynamics of a weakly bending rod: Comparison with Brownian dynamics simulations
1990
Kinetic effects of multiple charge modifications in enzyme‐substrate reactions: Brownian dynamics simulations of Cu, Zn superoxide dismutase
1992
[22] Diffusion-controlled enzymatic reactions
1991
Brownian dynamics simulation of the superoxide-superoxide dismutase reaction: iron and manganese enzymes
1990
Dynamics of substrate binding to copper zinc superoxide dismutase
1985
Brownian dynamics simulations of wormlike chains: dynamic light scattering from a 2311 base pair DNA fragment
1990
Extended Brownian dynamics of diffusion controlled reactions
1985
Structure of viral φ29 DNA condensed by simple triamines: A light‐scattering and electron‐microscopy study
1981
Diffusional dynamics of ligand-receptor association
1986
Brownian dynamics simulations of diffusion-influenced reactions: inclusion of intrinsic reactivity and gating
1990
Solutions of the full Poisson-Boltzmann equation with application to diffusion-controlled reactions
1989
Dynamic light scattering studies of internal motions in DNA. II. Clean viral DNAs
1980
Diffusion-controlled reactions between a spherical target and dumbbell dimer by Brownian dynamics simulation
1984
Simulation of the diffusion‐controlled reaction between superoxide and superoxide dismutase. I. Simple models
1985
Brownian dynamics of diffusion-controlled reactions: the lattice method
1985
Torsion dynamics and depolarization of fluorescence of linear macromolecules
1980
Optimization of Brownian dynamics methods for diffusion-influenced rate constant calculations
1986
Brownian dynamics simulation of diffusion-influenced bimolecular reactions
1984
Simulation of biomolecular diffusion and complex formation
1986
Sorption in the β-phases of transition metal(II) tetra-(4-methylpyridine) thiocyanates and related compounds
1969
Nmr relaxation in DNA. I. The contribution of torsional deformation modes of the elastic filament
1982
Brownian dynamics simulations of a three-subunit and a ten-subunit worm-like chain: Comparison of results with trumbell theory and with experimental results from DNA
1988
Torsion Dynamics and Depolarization of Fluorescence of Linear Macromolecules I. Theory and Application to DNAt
1979
Bending and twisting dynamics of short linear DNAs. Analysis of the triplet anisotropy decay of a 209 base pair fragment by Brownian simulation
1989
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