Citation Impact
Citing Papers
BRAKER2: automatic eukaryotic genome annotation with GeneMark-EP+ and AUGUSTUS supported by a protein database
2021 Standout
NCBI BLAST+ integrated into Galaxy
2015
Long Noncoding RNA as Modular Scaffold of Histone Modification Complexes
2010 StandoutScience
GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists
2009 Standout
Virtual ChIP-seq: predicting transcription factor binding by learning from the transcriptome
2022
The advantages of the Matthews correlation coefficient (MCC) over F1 score and accuracy in binary classification evaluation
2020 Standout
G-rich Oligonucleotides Inhibit HIF-1α and HIF-2α and Block Tumor Growth
2009 StandoutNobel
Genome-wide features of neuroendocrine regulation in Drosophila by the basic helix-loop-helix transcription factor DIMMED
2015 StandoutNobel
Application of experimentally verified transcription factor binding sites models for computational analysis of ChIP-Seq data
2014
ImageJ2: ImageJ for the next generation of scientific image data
2017 Standout
A Feature-Based Approach to Modeling Protein–DNA Interactions
2008
Isolation of single-base genome-edited human iPS cells without antibiotic selection
2014
Structural basis of macromolecular recognition
2002
High-fidelity CRISPR–Cas9 nucleases with no detectable genome-wide off-target effects
2016 StandoutNature
Comprehensive analysis of the specificity of transcription activator-like effector nucleases
2014
PRODRG: a tool for high-throughput crystallography of protein–ligand complexes
2004 Standout
Broad specificity profiling of TALENs results in engineered nucleases with improved DNA-cleavage specificity
2014
Scoring docked conformations generated by rigid-body protein-protein docking
2000
Applications of genome editing technology in the targeted therapy of human diseases: mechanisms, advances and prospects
2020 Standout
Area under Precision-Recall Curves for Weighted and Unweighted Data
2014
Prediction of the Structure of the Complex Between the 30S Ribosomal Subunit and Colicin E3 via Weighted-Geometric Docking
2003 StandoutNobel
The ClusPro web server for protein–protein docking
2017 Standout
motifStack for the analysis of transcription factor binding site evolution
2018
Using intron position conservation for homology-based gene prediction
2016
The Human Transcription Factors
2018 Standout
Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning
2015 Standout
Molecular and Genetic Properties of Tumors Associated with Local Immune Cytolytic Activity
2015 Standout
Docking unbound proteins using shape complementarity, desolvation, and electrostatics
2002
Computational design of self-assembling cyclic protein homo-oligomers
2016 StandoutNobel
Electrostatics in protein–protein docking
2002
Host microbiota constantly control maturation and function of microglia in the CNS
2015 Standout
Protein–Protein Docking with Backbone Flexibility
2007 StandoutNobel
PatchDock and SymmDock: servers for rigid and symmetric docking
2005 Standout
Development and Applications of CRISPR-Cas9 for Genome Engineering
2014 Standout
Transcription Activator-Like Effector Nuclease (TALEN)-Mediated CLYBL Targeting Enables Enhanced Transgene Expression and One-Step Generation of Dual Reporter Human Induced Pluripotent Stem Cell (iPSC) and Neural Stem Cell (NSC) Lines
2015
Progress in protein–protein docking: Atomic resolution predictions in the CAPRI experiment using RosettaDock with an improved treatment of side‐chain flexibility
2005 StandoutNobel
Discovering Motifs in Ranked Lists of DNA Sequences
2007
Absence of a simple code: how transcription factors read the genome
2014
CRISPR-Based Technologies for the Manipulation of Eukaryotic Genomes
2016 Standout
Targeting the Achilles heel of the hepatitis B virus: a review of current treatments against covalently closed circular DNA
2015 StandoutNobel
Improved side‐chain modeling for protein–protein docking
2005 StandoutNobel
RosettaDock in CAPRI rounds 6–12
2007 StandoutNobel
Assessment of blind predictions of protein–protein interactions: Current status of docking methods
2003
Focus-of-attention from local color symmetries
2004
State-of-the-Art in Visual Attention Modeling
2012 Standout
Protein–Protein Docking with Simultaneous Optimization of Rigid-body Displacement and Side-chain Conformations
2003 StandoutNobel
Evaluation of methods for modeling transcription factor sequence specificity
2013
Protein docking using spherical polar Fourier correlations
2000
Hybrid machine learning for human action recognition and prediction in assembly
2021
Recent trends in the instrumental analysis of rare earth elements in geological and industrial materials
1996
Rare earth elements: A review of applications, occurrence, exploration, analysis, recycling, and environmental impact
2019 Standout
Outlook on human-centric manufacturing towards Industry 5.0
2022 Standout
Single Crystals Heterogeneity Impacts the Intrinsic and Extrinsic Properties of Metal–Organic Frameworks
2021 StandoutNobel
Genome-wide identification of neuronal activity-regulated genes in Drosophila
2016 StandoutNobel
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
2018 Standout
Specific Electrostatic Molecular Recognition in Water
2016 StandoutNobel
Replicons of a Rodent Hepatitis C Model Virus Permit Selection of Highly Permissive Cells
2019 StandoutNobel
Targeted gene knock-in by homology-directed genome editing using Cas9 ribonucleoprotein and AAV donor delivery
2017 StandoutNobel
Protein–DNA binding: complexities and multi-protein codes
2013
An online bioinformatics tool predicts zinc finger and TALE nuclease off-target cleavage
2013
Works of Stefan Posch being referenced
Towards an Image Understanding Architecture for a Situated Artificial Communicator
1999
Jstacs: a java framework for statistical analysis and classification of biological sequences
2012
Recognition of splice sites using maximum conditional likelihood.
2007
DiffLogo: a comparative visualization of sequence motifs
2015
Accurate prediction of cell type-specific transcription factor binding
2019
Determination of traces of rare earth elements in geological samples
1993
De-Novo Discovery of Differentially Abundant Transcription Factor Binding Sites Including Their Positional Preference
2011
Identification of transcription factor binding sites with variable-order Bayesian networks
2005
Computational Predictions Provide Insights into the Biology of TAL Effector Target Sites
2013
Estimation and filtering of potential protein-protein docking positions.
1998
VOMBAT: prediction of transcription factor binding sites using variable order Bayesian trees
2006
MiToBo - A Toolbox for Image Processing and Analysis
2016
TALENoffer: genome-wide TALEN off-target prediction
2013
Protein docking combining symbolic descriptions of molecular surfaces and grid-based scoring functions.
1995
A general approach for discriminative de novo motif discovery from high-throughput data
2013