Citation Impact
Citing Papers
Human cerebral organoids recapitulate gene expression programs of fetal neocortex development
2015 StandoutNobel
Spatially resolved, highly multiplexed RNA profiling in single cells
2015 StandoutScience
Lineage Tracing Reveals Lgr5 + Stem Cell Activity in Mouse Intestinal Adenomas
2012 Science
Trans-splicing of the C. elegans let-7 primary transcript developmentally regulates let-7 microRNA biogenesis and let-7 family microRNA activity
2019 StandoutNobel
Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq
2015 StandoutScience
Combinatorial labeling of single cells for gene expression cytometry
2015 Science
Multiplex single-cell profiling of chromatin accessibility by combinatorial cellular indexing
2015 Science
A survey of best practices for RNA-seq data analysis
2016 Standout
Wnt secretion is required to maintain high levels of Wnt activity in colon cancer cells
2013
Inference and analysis of cell-cell communication using CellChat
2021 Standout
SCANPY: large-scale single-cell gene expression data analysis
2018 Standout
Determining cell type abundance and expression from bulk tissues with digital cytometry
2019 Standout
deepTools2: a next generation web server for deep-sequencing data analysis
2016 Standout
Molecular Architecture of the Mouse Nervous System
2018 Standout
Fast, sensitive and accurate integration of single-cell data with Harmony
2019 Standout
Single-cell spatial reconstruction reveals global division of labour in the mammalian liver
2017 Nature
Capture and Amplification by Tailing and Switching (CATS)
2014
Wnt signaling in cancer
2016 Standout
Spatially resolved transcriptomics and beyond
2014
Single-cell mRNA quantification and differential analysis with Census
2017
Highly multiplexed simultaneous detection of RNAs and proteins in single cells
2016
Non-redundant functions of EMT transcription factors
2018
SCENIC: single-cell regulatory network inference and clustering
2017 Standout
TRIBE: Hijacking an RNA-Editing Enzyme to Identify Cell-Specific Targets of RNA-Binding Proteins
2016 StandoutNobel
Colorectal Cancer Stem Cells: From the Crypt to the Clinic
2014
Cancer stem cells revisited
2017 Standout
Integrating single-cell transcriptomic data across different conditions, technologies, and species
2018 Standout
The single-cell transcriptional landscape of mammalian organogenesis
2019 StandoutNature
Computational and analytical challenges in single-cell transcriptomics
2015
Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq
2014 Nature
Normalization and variance stabilization of single-cell RNA-seq data using regularized negative binomial regression
2019 Standout
Single-cell Transcriptome Profiling reveals Dermal and Epithelial cell fate decisions during Embryonic Hair Follicle Development
2020
Host microbiota constantly control maturation and function of microglia in the CNS
2015 Standout
Single cell transcriptomics reveals unanticipated features of early hematopoietic precursors
2016
On the Dependency of Cellular Protein Levels on mRNA Abundance
2016 Standout
Tumour heterogeneity and cancer cell plasticity
2013 StandoutNature
Simultaneous epitope and transcriptome measurement in single cells
2017 Standout
Power analysis of single-cell RNA-sequencing experiments
2017
Bridge helix arginines play a critical role in Cas9 sensitivity to mismatches
2020 StandoutNobel
Dictionary learning for integrative, multimodal and scalable single-cell analysis
2023 Standout
Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets
2015 Standout
Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cells
2017
Oxidative Stress in Cancer
2020 Standout
Spatial reconstruction of single-cell gene expression data
2015 Standout
Long-Term Expansion of Functional Mouse and Human Hepatocytes as 3D Organoids
2018 StandoutNobel
scmap: projection of single-cell RNA-seq data across data sets
2018
Single-Cell Transcriptomic Analysis of Primary and Metastatic Tumor Ecosystems in Head and Neck Cancer
2017 Standout
Coming of age: ten years of next-generation sequencing technologies
2016 Standout
Somatosensory neuron types identified by high-coverage single-cell RNA-sequencing and functional heterogeneity
2015
Pooled CRISPR screening with single-cell transcriptome readout
2017
Droplet Barcoding for Single-Cell Transcriptomics Applied to Embryonic Stem Cells
2015 Standout
Rare Cell Detection by Single-Cell RNA Sequencing as Guided by Single-Molecule RNA FISH
2018
Metastatic colonization by circulating tumour cells
2016 StandoutNature
Single-cell barcoding and sequencing using droplet microfluidics
2016
Tissue-Resident Macrophage Enhancer Landscapes Are Shaped by the Local Microenvironment
2014 Standout
Comprehensive Integration of Single-Cell Data
2019 Standout
Unbiased classification of sensory neuron types by large-scale single-cell RNA sequencing
2014 Standout
The prognostic landscape of genes and infiltrating immune cells across human cancers
2015 Standout
The first five years of single-cell cancer genomics and beyond
2015
A Unique Microglia Type Associated with Restricting Development of Alzheimer’s Disease
2017 Standout
ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing
2016 StandoutNobel
Microfluidics: reframing biological enquiry
2015
Gene regulation by long non-coding RNAs and its biological functions
2020 Standout
Modeling Development and Disease with Organoids
2016 Standout
Minimap2: pairwise alignment for nucleotide sequences
2018 Standout
Reversed graph embedding resolves complex single-cell trajectories
2017 Standout
Missing data and technical variability in single-cell RNA-sequencing experiments
2017
Microfluidic single-cell whole-transcriptome sequencing
2014
Understanding development and stem cells using single cell-based analyses of gene expression
2017
Supramolecular Hydrogelators and Hydrogels: From Soft Matter to Molecular Biomaterials
2015 Standout
Massively Parallel Single-Cell RNA-Seq for Marker-Free Decomposition of Tissues into Cell Types
2014 Science
The Human Cell Atlas
2017
Wound Healing: A Cellular Perspective
2018 Standout
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
2018 Standout
Mouse embryonic stem cells can differentiate via multiple paths to the same state
2017
Redundant Sources of Wnt Regulate Intestinal Stem Cells and Promote Formation of Paneth Cells
2012
Resolvin E1 Reverses Experimental Periodontitis and Dysbiosis
2016
Tissue-specific contributions of Tmem79 to atopic dermatitis and mast cell-mediated histaminergic itch
2018 StandoutNobel
The lncRNA Hand2os1/Uph locus orchestrates heart development through regulation of precise expression of Hand2
2019
The oral microbiota: dynamic communities and host interactions
2018 Standout
Emerging Droplet Microfluidics
2017 Standout
Differences and similarities between human and chimpanzee neural progenitors during cerebral cortex development
2016 StandoutNobel
Works of Sopheak Sim being referenced
Dissecting direct reprogramming from fibroblast to neuron using single-cell RNA-seq
2016 Nature
Role of epithelial to mesenchymal transition associated genes in mammary gland regeneration and breast tumorigenesis
2017
Quantitative assessment of single-cell RNA-sequencing methods
2013
Identification of a cKit+ Colonic Crypt Base Secretory Cell That Supports Lgr5+ Stem Cells in Mice
2012
Transcriptomic Profiling Maps Anatomically Patterned Subpopulations among Single Embryonic Cardiac Cells
2016