Citation Impact
Citing Papers
Histone demethylase KDM6A directly senses oxygen to control chromatin and cell fate
2019 StandoutScienceNobel
Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression
2009 Standout
Dynamic transcriptomes during neural differentiation of human embryonic stem cells revealed by short, long, and paired-end sequencing
2010
Nuclear Lamin-A Scales with Tissue Stiffness and Enhances Matrix-Directed Differentiation
2013 StandoutScience
Widespread Transcription in an Amphibian Oocyte Relates to Its Reprogramming Activity on Transplanted Somatic Nuclei
2011 StandoutNobel
Tumor hypoxia induces nuclear paraspeckle formation through HIF-2α dependent transcriptional activation of NEAT1 leading to cancer cell survival
2014 StandoutNobel
Comprehensive molecular portraits of human breast tumours
2012 StandoutNature
Mutational landscape and significance across 12 major cancer types
2013 StandoutNature
Improved prognostic classification of breast cancer defined by antagonistic activation patterns of immune response pathway modules
2010
Evidence of inflammatory immune signaling in chronic fatigue syndrome: A pilot study of gene expression in peripheral blood
2008
Metascape provides a biologist-oriented resource for the analysis of systems-level datasets
2019 Standout
Long Noncoding RNAs with Enhancer-like Function in Human Cells
2010
Circular RNA AKT3 upregulates PIK3R1 to enhance cisplatin resistance in gastric cancer via miR-198 suppression
2019 Standout
The DNA-damage response in human biology and disease
2009 StandoutNature
lincRNAs: Genomics, Evolution, and Mechanisms
2013 Standout
Chd1 regulates open chromatin and pluripotency of embryonic stem cells
2009 Nature
The emerging role of nuclear architecture in DNA repair and genome maintenance
2009
The microbiota in adaptive immune homeostasis and disease
2016 StandoutNature
Modular regulatory principles of large non-coding RNAs
2012 StandoutNature
Transcriptional competence and the active marking of tissue-specific enhancers by defined transcription factors in embryonic and induced pluripotent stem cells
2009
Molecular mechanisms of epithelial–mesenchymal transition
2014 Standout
Chromatin Connections to Pluripotency and Cellular Reprogramming
2011
Genomic Prevalence of Heterochromatic H3K9me2 and Transcription Do Not Discriminate Pluripotent from Terminally Differentiated Cells
2011
Genome-scale epigenetic reprogramming during epithelial-to-mesenchymal transition
2011
UTX mediates demethylation of H3K27me3 at muscle-specific genes during myogenesis
2010
Methods and Applications of CRISPR-Mediated Base Editing in Eukaryotic Genomes
2017
Hallmarks of aging: An expanding universe
2023 Standout
Chromatin plasticity and genome organization in pluripotent embryonic stem cells
2010
Jumonji Modulates Polycomb Activity and Self-Renewal versus Differentiation of Stem Cells
2009
The mini-driver model of polygenic cancer evolution
2015 StandoutNobel
GSVA: gene set variation analysis for microarray and RNA-Seq data
2013 Standout
An RNA-Sequencing Transcriptome and Splicing Database of Glia, Neurons, and Vascular Cells of the Cerebral Cortex
2014 Standout
The Caenorhabditis elegans SOMI-1 zinc finger protein and SWI/SNF promote regulation of development by the mir-84 microRNA
2011 StandoutNobel
Enrichment Map: A Network-Based Method for Gene-Set Enrichment Visualization and Interpretation
2010 Standout
Transcription Dynamics
2009
Mechanisms of nuclear reprogramming by eggs and oocytes: a deterministic process?
2011 StandoutNobel
Gene Expression Subtypes in Patients with Chronic Fatigue Syndrome/Myalgic Encephalomyelitis
2008
Single-Molecule Dynamics of Enhanceosome Assembly in Embryonic Stem Cells
2014 StandoutNobel
Super-Enhancers in the Control of Cell Identity and Disease
2013 Standout
A Long Noncoding RNA Controls Muscle Differentiation by Functioning as a Competing Endogenous RNA
2011 Standout
Replication of an empirical approach to delineate the heterogeneity of chronic unexplained fatigue
2009
Inferring Pathway Activity toward Precise Disease Classification
2008
Noncoding RNA in development
2008
The Perseus computational platform for comprehensive analysis of (prote)omics data
2016 Standout
Integrated genomic characterization of endometrial carcinoma
2013 StandoutNature
Global epigenetic changes during somatic cell reprogramming to iPS cells
2011
Altered Nuclear Retention of mRNAs Containing Inverted Repeats in Human Embryonic Stem Cells: Functional Role of a Nuclear Noncoding RNA
2009
Regulating RNA polymerase pausing and transcription elongation in embryonic stem cells
2011
Large histone H3 lysine 9 dimethylated chromatin blocks distinguish differentiated from embryonic stem cells
2009
BRD7, a Novel PBAF-specific SWI/SNF Subunit, Is Required for Target Gene Activation and Repression in Embryonic Stem Cells
2008
A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression
2011 StandoutNature
Diversification of memory B cells drives the continuous adaptation of secretory antibodies to gut microbiota
2015
Evaluation of Factors Related to Late Recurrence - Later than 10 Years after the Initial Treatment - in Primary Breast Cancer
2013 Standout
Using synthetic templates to design an unbiased multiplex PCR assay
2013
Minimum data elements for research reports on CFS
2012 StandoutNobel
EMT: 2016
2016 Standout
The immune contexture in human tumours: impact on clinical outcome
2012 Standout
Next-generation proteomics: towards an integrative view of proteome dynamics
2012
Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation
2008
The Genetics and Epigenetics of Fatigue
2010
Molecular Maps of the Reorganization of Genome-Nuclear Lamina Interactions during Differentiation
2010
Role for Dpy-30 in ES Cell-Fate Specification by Regulation of H3K4 Methylation within Bivalent Domains
2011
Subnuclear segregation of genes and core promoter factors in myogenesis
2011 StandoutNobel
The Noncoding RNA Revolution—Trashing Old Rules to Forge New Ones
2014 Standout
Pathway and network analysis of cancer genomes
2015
De novo discovery of mutated driver pathways in cancer
2011
Topological domains in mammalian genomes identified by analysis of chromatin interactions
2012 StandoutNature
lincRNAs act in the circuitry controlling pluripotency and differentiation
2011 StandoutNature
Long Noncoding RNAs: Cellular Address Codes in Development and Disease
2013 Standout
Spatial partitioning of the regulatory landscape of the X-inactivation centre
2012 StandoutNature
Long non-coding RNAs: insights into functions
2009 Standout
Moderate Exercise Increases Expression for Sensory, Adrenergic, and Immune Genes in Chronic Fatigue Syndrome Patients But Not in Normal Subjects
2009
The Polycomb complex PRC2 and its mark in life
2011 StandoutNature
Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes
2013 Standout
CHD7 cooperates with PBAF to control multipotent neural crest formation
2010 StandoutNature
Tumor-infiltrating regulatory T cells as targets of cancer immunotherapy
2023 StandoutNobel
A novel signaling pathway impact analysis
2008
Xenopusoocytes reactivate muscle gene transcription in transplanted somatic nuclei independently of myogenic factors
2009 StandoutNobel
CCR8+FOXp3+Tregcells as master drivers of immune regulation
2017
Inference of patient-specific pathway activities from multi-dimensional cancer genomics data using PARADIGM
2010
Histone variant macroH2A confers resistance to nuclear reprogramming
2011 StandoutNobel
Dynamic plasticity of large-scale chromatin structure revealed by self-assembly of engineered chromosome regions
2010
Direct conversion of mouse fibroblasts to self-renewing, tripotent neural precursor cells
2012 StandoutNobel
SIRT6, a Mammalian Deacylase with Multitasking Abilities
2019
The ectonucleotidases CD 39 and CD 73: Novel checkpoint inhibitor targets
2017
Clonal expansion of CD8 T cells in the systemic circulation precedes development of ipilimumab-induced toxicities
2016 StandoutNobel
Epithelial Plasticity: A Common Theme in Embryonic and Cancer Cells
2013 StandoutScience
Histone H3K27ac separates active from poised enhancers and predicts developmental state
2010 Standout
CRISPR-Cas guides the future of genetic engineering
2018 StandoutScienceNobel
Works of Sol Efroni being referenced
Reciprocal Regulation between SIRT6 and miR-122 Controls Liver Metabolism and Predicts Hepatocarcinoma Prognosis
2015
Tamoxifen-resistant breast cancer cells are resistant to DNA-damaging chemotherapy because of upregulated BARD1 and BRCA1
2018
Global Transcription in Pluripotent Embryonic Stem Cells
2008
The PathOlogist: an automated tool for pathway-centric analysis
2011
Rep‐Seq: uncovering the immunological repertoire through next‐generation sequencing
2011
Detecting Cancer Gene Networks Characterized by Recurrent Genomic Alterations in a Population
2011
Identification of Key Processes Underlying Cancer Phenotypes Using Biologic Pathway Analysis
2007
Stem cells do play with dice: A statistical physics view of transcription
2009
IL-27 acts on DCs to suppress the T cell response and autoimmunity by inducing expression of the immunoregulatory molecule CD39
2013
The whole-organism heavy chain B cell repertoire from Zebrafish self-organizes into distinct network features
2011
Gene Expression Profile of Empirically Delineated Classes of Unexplained Chronic Fatigue
2006