Citation Impact
Citing Papers
Histone demethylase KDM6A directly senses oxygen to control chromatin and cell fate
2019 StandoutScienceNobel
Optimal Dissociation Methods Differ for N - and O -Glycopeptides
2020 StandoutNobel
A genome-wide CRISPR-based screen identifies KAT7 as a driver of cellular senescence
2021
Causal role for inheritance of H3K27me3 in maintaining the OFF state of a Drosophila HOX gene
2017 Science
Illuminating the dark phosphoproteome
2019
Deciphering O -glycoprotease substrate preferences with O-Pair Search
2022 StandoutNobel
A vicious circle between insulin resistance and inflammation in nonalcoholic fatty liver disease
2017
Inference and analysis of cell-cell communication using CellChat
2021 Standout
The diversity and breadth of cancer cell fatty acid metabolism
2021
Ferroptosis is governed by differential regulation of transcription in liver cancer
2019
scAI: an unsupervised approach for the integrative analysis of parallel single-cell transcriptomic and epigenomic profiles
2020
dCas9 fusion to computer-designed PRC2 inhibitor reveals functional TATA box in distal promoter region
2022 StandoutNobel
The promise and challenge of therapeutic genome editing
2020 StandoutNatureNobel
Ferroptosis: molecular mechanisms and health implications
2020 Standout
The Biogenesis, Functions, and Challenges of Circular RNAs
2018 Standout
Top-down venomics of the East African green mamba, Dendroaspis angusticeps , and the black mamba, Dendroaspis polylepis , highlight the complexity of their toxin arsenals
2016
deepTools2: a next generation web server for deep-sequencing data analysis
2016 Standout
PRC2 is high maintenance
2019
A brave new world of RNA-binding proteins
2018
Hybrid mass spectrometry approaches in glycoprotein analysis and their usage in scoring biosimilarity
2016
Silymarin as Supportive Treatment in Liver Diseases: A Narrative Review
2020 Standout
Tet2 promotes pathogen infection-induced myelopoiesis through mRNA oxidation
2018 Nature
The selection and function of cell type-specific enhancers
2015
Bifunctional magnetic covalent organic framework for simultaneous enrichment of phosphopeptides and glycopeptides
2021
EZH2 is a potential therapeutic target for H3K27M-mutant pediatric gliomas
2017
Hallmarks of aging: An expanding universe
2023 Standout
Macrophages in immunoregulation and therapeutics
2023 Standout
O-Pair Search with MetaMorpheus for O-glycopeptide characterization
2020 StandoutNobel
Effective gene expression prediction from sequence by integrating long-range interactions
2021 StandoutNobel
Pioneer factors govern super-enhancer dynamics in stem cell plasticity and lineage choice
2015 Nature
The Human Transcription Factors
2018 Standout
Understanding Alzheimer's disease by global quantification of protein phosphorylation and sialylated N-linked glycosylation profiles: A chance for new biomarkers in neuroproteomics?
2017
TRIBE: Hijacking an RNA-Editing Enzyme to Identify Cell-Specific Targets of RNA-Binding Proteins
2016 StandoutNobel
Snakebite envenoming
2017 Standout
Targeting immunometabolism as an anti-inflammatory strategy
2020
Loss of the co-repressor GPS2 sensitizes macrophage activation upon metabolic stress induced by obesity and type 2 diabetes
2016
A Perspective on Extracellular Vesicles Proteomics
2017
PRC2 mediated H3K27 methylations in cellular identity and cancer
2015
Cellular senescence in ageing: from mechanisms to therapeutic opportunities
2020 Standout
Role of the Polycomb Repressive Complex 2 (PRC2) in Transcriptional Regulation and Cancer
2016
Measuring the multifaceted roles of mucin-domain glycoproteins in cancer
2022 StandoutNobel
Revealing the human mucinome
2022 StandoutNobel
The Genetics of Transcription Factor DNA Binding Variation
2016
Guidance of regulatory T cell development by Satb1-dependent super-enhancer establishment
2016 StandoutNobel
Glycopeptide variable window SWATH for improved data independent acquisition glycoprotein analysis
2020
Insights into RNA Biology from an Atlas of Mammalian mRNA-Binding Proteins
2012 Standout
RNA-binding proteins in human genetic disease
2020
The biogenesis, biology and characterization of circular RNAs
2019 Standout
An RNA-centric dissection of host complexes controlling flavivirus infection
2019 StandoutNobel
A Pragmatic Guide to Enrichment Strategies for Mass Spectrometry–Based Glycoproteomics
2020 StandoutNobel
Mitochondrial TCA cycle metabolites control physiology and disease
2020 Standout
RNA Interactions Are Essential for CTCF-Mediated Genome Organization
2019
Defining trained immunity and its role in health and disease
2020 Standout
Inflammation, metaflammation and immunometabolic disorders
2017 StandoutNature
Enhancer-associated H3K4 monomethylation by Trithorax-related, the Drosophila homolog of mammalian Mll3/Mll4
2012
Tumor-Associated Macrophages in Pancreatic Ductal Adenocarcinoma: Origin, Polarization, Function, and Reprogramming
2021
Coordinated circRNA Biogenesis and Function with NF90/NF110 in Viral Infection
2017
Capturing the Onset of PRC2-Mediated Repressive Domain Formation
2018
The Role of Data-Independent Acquisition for Glycoproteomics
2020
Gene regulation by long non-coding RNAs and its biological functions
2020 Standout
Regulation of gene expression by cis-acting long non-coding RNAs
2019
Tumor-infiltrating regulatory T cells as targets of cancer immunotherapy
2023 StandoutNobel
Glycoproteomics
2022 StandoutNobel
Global and site‐specific analysis of protein glycosylation in complex biological systems with Mass Spectrometry
2019
Innate immune memory in plants
2016
Overview of Extracellular Vesicles, Their Origin, Composition, Purpose, and Methods for Exosome Isolation and Analysis
2019 Standout
Site-Specific Quantification of Surface N-Glycoproteins in Statin-Treated Liver Cells
2016
Proton Transfer Charge Reduction Enables High-Throughput Top-Down Analysis of Large Proteoforms
2019
Innate immune memory: An evolutionary perspective
2018
Electron-Based Dissociation Is Needed for O-Glycopeptides Derived from OpeRATOR Proteolysis
2020 StandoutNobel
Ion Activation Methods for Peptides and Proteins
2015
Ion Activation Methods for Peptides and Proteins
2019
Loss of TET proteins in regulatory T cells promotes abnormal proliferation, Foxp3 destabilization and IL-17 expression
2019 StandoutNobel
High-Efficiency Phosphopeptide and Glycopeptide Simultaneous Enrichment by Hydrogen Bond–based Bifunctional Smart Polymer
2020
The Role of Electron Transfer Dissociation in Modern Proteomics
2017
Metabolic reprogramming and cancer progression
2020 StandoutScience
Multiple modes of PRC2 inhibition elicit global chromatin alterations in H3K27M pediatric glioma
2018
WebGestalt 2019: gene set analysis toolkit with revamped UIs and APIs
2019 Standout
Recent Advances in Glycoproteomic Analysis by Mass Spectrometry
2019
High-Resolution Ion Mobility Separations of Isomeric Glycoforms with Variations on the Peptide and Glycan Levels
2020
Chemical Glycoproteomics
2016 StandoutNobel
Works of Simone Sidoli being referenced
Acetyl-CoA Metabolism Supports Multistep Pancreatic Tumorigenesis
2019
Differential quantification of isobaric phosphopeptides using data-independent acquisition mass spectrometry
2016
Metabolic labeling in middle-down proteomics allows for investigation of the dynamics of the histone code
2017
Transcription Factor Cooperativity in Early Adipogenic Hotspots and Super-Enhancers
2014
EpiProfile Quantifies Histone Peptides With Modifications by Extracting Retention Time and Intensity in High-resolution Mass Spectra*
2015
Sequential Window Acquisition of all Theoretical Mass Spectra (SWATH) Analysis for Characterization and Quantification of Histone Post-translational Modifications
2015
Large Scale Analysis of Co-existing Post-translational Modifications in Histone Tails Reveals Global Fine Structure of Cross-talk
2014
Identification and Quantification of Histone PTMs Using High-Resolution Mass Spectrometry
2016
Two distinct modes for propagation of histone PTMs across the cell cycle
2015
Analyses of Histone Proteoforms Using Front-end Electron Transfer Dissociation-enabled Orbitrap Instruments
2016
An HDAC3-PROX1 corepressor module acts on HNF4α to control hepatic triglycerides
2017
The C. elegans H3K27 Demethylase UTX-1 Is Essential for Normal Development, Independent of Its Enzymatic Activity
2012
Characterization of histone acylations links chromatin modifications with metabolism
2017
Proteomics in chromatin biology and epigenetics: Elucidation of post-translational modifications of histone proteins by mass spectrometry
2012
Progress in epigenetic histone modification analysis by mass spectrometry for clinical investigations
2015
Top-down and Middle-down Protein Analysis Reveals that Intact and Clipped Human Histones Differ in Post-translational Modification Patterns*
2015
Systems Level Analysis of Histone H3 Post-translational Modifications (PTMs) Reveals Features of PTM Crosstalk in Chromatin Regulation
2016
High-Resolution Mapping of RNA-Binding Regions in the Nuclear Proteome of Embryonic Stem Cells
2016
Histone Acetyltransferase p300 Induces De Novo Super-Enhancers to Drive Cellular Senescence
2019
H3K9me3-heterochromatin loss at protein-coding genes enables developmental lineage specification
2019 Science
Middle‐down hybrid chromatography/tandem mass spectrometry workflow for characterization of combinatorial post‐translational modifications in histones
2014
Bottom-Up and Middle-Down Proteomics Have Comparable Accuracies in Defining Histone Post-Translational Modification Relative Abundance and Stoichiometry
2015
Middle-down proteomics: a still unexploited resource for chromatin biology
2017
Precision Mapping of Coexisting Modifications in Histone H3 Tails from Embryonic Stem Cells by ETD-MS/MS
2013
Multiplexed data independent acquisition (MSX‐DIA) applied by high resolution mass spectrometry improves quantification quality for the analysis of histone peptides
2016
Extensive Characterization of Heavily Modified Histone Tails by 193 nm Ultraviolet Photodissociation Mass Spectrometry via a Middle–Down Strategy
2018
Domain-focused CRISPR screen identifies HRI as a fetal hemoglobin regulator in human erythroid cells
2018 Science