Standout Papers
Citation Impact
Citing Papers
CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes
2007 StandoutScience
Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic “supergroups”
2009 Standout
Chromosome Evolution in the Thermotogales : Large-Scale Inversions and Strain Diversification of CRISPR Sequences
2006
Metagenomic Analysis of the Human Distal Gut Microbiome
2006 StandoutScience
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
2015 Standout
Divergence and Redundancy of 16S rRNA Sequences in Genomes with Multiple rrn Operons
2004
Dendritic Cell Targeting of Survivin Protein in a Xenogeneic Form Elicits Strong CD4+ T Cell Immunity to Mouse Survivin
2006 StandoutNobel
A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes
2004
The COG database: an updated version includes eukaryotes
2003 Standout
Hypoxia and intra-complex genetic suppressors rescue complex I mutants by a shared mechanism
2024 StandoutNobel
Heparin-Protein Interactions
2002 Standout
AMP-activated protein kinase: also regulated by ADP?
2011
Modularity in the gain and loss of genes: applications for function prediction
2001
SEC14L2 enables pan-genotype HCV replication in cell culture
2015 StandoutNatureNobel
Network biology: understanding the cell's functional organization
2004 Standout
The Spliceosome: Design Principles of a Dynamic RNP Machine
2009 Standout
It's the genes! EST access to human genome content
1996
TGF-β signalling from cell membrane to nucleus through SMAD proteins
1997 StandoutNature
Iron–sulfur-protein biogenesis in eukaryotes
2005
Multiplex messenger assay: simultaneous, quantitative measurement of expression of many genes in the context of T cell activation
1996
Noncanonical Tandem SH2 Enables Interaction of Elongation Factor Spt6 with RNA Polymerase II
2010
Lessons from Hereditary Colorectal Cancer
1996 Standout
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
2015 Standout
Database resources of the National Center for Biotechnology Information: update
2003 Standout
Mitochondria: In Sickness and in Health
2012 Standout
Mechanically Activated Ion Channels
2015 StandoutNobel
Mitochondrial remnant organelles of Giardia function in iron-sulphur protein maturation
2003 Nature
The Histone Chaperone Spt6 Is Required for Activation-induced Cytidine Deaminase Target Determination through H3K4me3 Regulation
2012 StandoutNobel
α-Latrotoxin Receptor CIRL/Latrophilin 1 (CL1) Defines an Unusual Family of Ubiquitous G-protein-linked Receptors
1998 StandoutNobel
Current thoughts on the phosphatidylinositol transfer protein family
2002
The HHpred interactive server for protein homology detection and structure prediction
2005 Standout
The structure of the CstF-77 homodimer provides insights into CstF assembly
2007
Gene Loss, Protein Sequence Divergence, Gene Dispensability, Expression Level, and Interactivity Are Correlated in Eukaryotic Evolution
2003
Stem cells, ageing and the quest for immortality
2006 StandoutNature
Prediction of the Coding Sequences of Unidentified Human Genes. VI. The Coding Sequences of 80 New Genes (KIAA0201-KIAA0280) Deduced by Analysis of cDNA Clones from Cell Line KG-1 and Brain
1996
Hypoxia Rescues Frataxin Loss by Restoring Iron Sulfur Cluster Biogenesis
2019 StandoutNobel
Conserved N-terminal Motifs of Telomerase Reverse Transcriptase Required for Ribonucleoprotein Assembly in Vivo
2003
Entrez Gene: gene-centered information at NCBI
2010 Standout
Unique features revealed by the genome sequence of Acinetobacter sp. ADP1, a versatile and naturally transformation competent bacterium
2004
Evolution and classification of the CRISPR–Cas systems
2011 StandoutNobel
Mad-related genes in the human
1996
Evolutionary conservation and in vitro reconstitution of microsporidian iron–sulfur cluster biosynthesis
2017
Hydrogenosomes, Mitochondria and Early Eukaryotic Evolution
2003
The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks
2013 Standout
Comparative genomics, minimal gene-sets and the last universal common ancestor
2003
Broad phylogenomic sampling improves resolution of the animal tree of life
2008 StandoutNature
Multiple alignment of complete sequences (MACS) in the post-genomic era
2001
CD-Search: protein domain annotations on the fly
2004 Standout
DWNN, a novel ubiquitin-like domain, implicates RBBP6 in mRNA processing and ubiquitin-like pathways
2006
Multiple Isoforms of Heparan Sulfate d-Glucosaminyl 3-O-Sulfotransferase
1999
Iron hydrogenases – ancient enzymes in modern eukaryotes
2002
Prp8 protein: At the heart of the spliceosome
2005
RNAmmer: consistent and rapid annotation of ribosomal RNA genes
2007 Standout
AMPK: a nutrient and energy sensor that maintains energy homeostasis
2012 Standout
Gene expression profiling of human satellite cells during muscular aging using cDNA arrays
2003
Molecular Architecture of the Human Pre-mRNA 3′ Processing Complex
2009 StandoutNobel
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
2002 Standout
Phytozome: a comparative platform for green plant genomics
2011 Standout
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
1997 Standout
C. elegans phagocytosis and cell-migration protein CED-5 is similar to human DOCK180
1998 StandoutNatureNobel
Simple yet functional phosphate-loop proteins
2018 StandoutNobel
An Empirical Assessment of Long-Branch Attraction Artefacts in Deep Eukaryotic Phylogenomics
2005
Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays
1999 Standout
A segment of cold shock protein directs the folding of a combinatorial protein
2005 StandoutNobel
Telomerase core components protect Candida telomeres from aberrant overhang accumulation
2007 StandoutNobel
TGF-β SIGNAL TRANSDUCTION
1998 Standout
TWIK-1, a ubiquitous human weakly inward rectifying K+ channel with a novel structure.
1996
What messenger RNA capping tells us about eukaryotic evolution
2002
Chemicals from lignin: an interplay of lignocellulose fractionation, depolymerisation, and upgrading
2018 Standout
A search for proteins that interact genetically with histone H3 and H4 amino termini uncovers novel regulators of the Swe1 kinase in Saccharomyces cerevisiae.
1996
Comparing Photosynthetic and Photovoltaic Efficiencies and Recognizing the Potential for Improvement
2011 StandoutScience
Novel gene transcripts preferentially expressed in human muscles revealed by quantitative hybridization of a high density cDNA array.
1996
Introns in gene evolution
2003
Occurrence, Classification, and Biological Function of Hydrogenases: An Overview
2007 Standout
Three proteins involved in Caenorhabditis elegans vulval invagination are similar to components of a glycosylation pathway
1999 StandoutNobel
STRING: a database of predicted functional associations between proteins
2003 Standout
Hydrogenases
2014 Standout
Expression profiling with arrays of randomly disrupted genes in mouse embryonic stem cells leads to in vivo functional analysis
2004 StandoutNobel
Biochemistry and Evolution of Anaerobic Energy Metabolism in Eukaryotes
2012
Genomic insights that advance the species definition for prokaryotes
2005 Standout
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
2018 Standout
Introns in Gene Evolution
2003
Mitochondrial-type assembly of FeS centers in the hydrogenosomes of the amitochondriate eukaryote Trichomonas vaginalis
2004
Protists are microbes too: a perspective
2008
Identification of fission yeast nuclear markers using random polypeptide fusions with green fluorescent protein
1996 StandoutNobel
Works of Simone Duprat being referenced
Genome Evolution at the Genus Level: Comparison of Three Complete Genomes of Hyperthermophilic Archaea
2001
Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi
2001 StandoutNature
Genomic Exploration of the Hemiascomycetous Yeasts: 2. Data generation and processing
2000
The Genexpress Index: a resource for gene discovery and the genic map of the human genome.
1995
[IMAGE: molecular integration of the analysis of the human genome and its expression].
1995