Citation Impact
Citing Papers
Topological control of cytokine receptor signaling induces differential effects in hematopoiesis
2019 StandoutScienceNobel
Exploiting conformational dynamics to modulate the function of designed proteins
2023 StandoutNobel
Lysine Acetylation Targets Protein Complexes and Co-Regulates Major Cellular Functions
2009 StandoutScience
Crippling life support for SARS-CoV-2 and other viruses through synthetic lethality
2020 StandoutNobel
Src kinase activation by direct interaction with the integrin β cytoplasmic domain
2003
Viruses and Interactomes in Translation
2012
Structural, Functional, and Bioinformatic Studies Demonstrate the Crucial Role of an Extended Peptide Binding Site for the SH3 Domain of Yeast Abp1p
2009
Computational design of soluble and functional membrane protein analogues
2024 StandoutNatureNobel
Distinct Binding Specificity of the Multiple PDZ Domains of INADL, a Human Protein with Homology to INAD from Drosophila melanogaster
2001
Metascape provides a biologist-oriented resource for the analysis of systems-level datasets
2019 Standout
STRING v9.1: protein-protein interaction networks, with increased coverage and integration
2012 Standout
A Specificity Map for the PDZ Domain Family
2008
RIM Proteins Tether Ca2+ Channels to Presynaptic Active Zones via a Direct PDZ-Domain Interaction
2011 StandoutNobel
A De Novo Protein Binding Pair By Computational Design and Directed Evolution
2011 StandoutNobel
The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function
2010 Standout
Inference of Macromolecular Assemblies from Crystalline State
2007 Standout
Cell Signaling by Receptor Tyrosine Kinases
2010 Standout
Ten thousand interactions for the molecular biologist
2004
Design of protein-interaction specificity gives selective bZIP-binding peptides
2009 Nature
The Spliceosome: Design Principles of a Dynamic RNP Machine
2009 Standout
Contextual Specificity in Peptide-Mediated Protein Interactions
2008
Survey of the year 2004 commercial optical biosensor literature
2005
Photonic structures in biology
2003 StandoutNature
Minimotif Miner 3.0: database expansion and significantly improved reduction of false-positive predictions from consensus sequences
2011
Quantification of PDZ Domain Specificity, Prediction of Ligand Affinity and Rational Design of Super-binding Peptides
2004
Optimization of specificity in a cellular protein interaction network by negative selection
2003 Nature
Role of the Biomolecular Energy Gap in Protein Design, Structure, and Evolution
2012 StandoutNobel
The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible
2016 Standout
Mechanism of Activation of the RAF-ERK Signaling Pathway by Oncogenic Mutations of B-RAF
2004 Standout
Visualizing the mechanical activation of Src
2005 StandoutNatureNobel
Rational design of α-helical tandem repeat proteins with closed architectures
2015 StandoutNatureNobel
Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool
2013 Standout
The human DEPhOsphorylation database DEPOD: a 2015 update
2014
The coming of age of de novo protein design
2016 StandoutNatureNobel
Foundations for engineering biology
2005 StandoutNature
Enrichr: a comprehensive gene set enrichment analysis web server 2016 update
2016 Standout
Molecular chaperones in protein folding and proteostasis
2011 StandoutNature
Quantitative Mass Spectrometry Reveals Dynamics of Factor-inhibiting Hypoxia-inducible Factor-catalyzed Hydroxylation
2011 StandoutNobel
Engineering novel binding proteins from nonimmunoglobulin domains
2005
Dissecting protein–protein recognition sites
2002
A computational tool for identifying minimotifs in protein–protein interactions and improving the accuracy of minimotif predictions
2010
EGFR Mutation and Resistance of Non–Small-Cell Lung Cancer to Gefitinib
2005 Standout
Common pitfalls in preclinical cancer target validation
2017 StandoutNobel
A Pattern-Based Method for the Identification of MicroRNA Binding Sites and Their Corresponding Heteroduplexes
2006 Standout
Modular peptide binding: From a comparison of natural binders to designed armadillo repeat proteins
2013
Designed Armadillo Repeat Proteins: Library Generation, Characterization and Selection of Peptide Binders with High Specificity
2012
Mechanisms of Autoinhibition and STI-571/Imatinib Resistance Revealed by Mutagenesis of BCR-ABL
2003
Linear motifs: Evolutionary interaction switches
2005
The molecular sociology of the cell
2007 Nature
Recapitulation and Design of Protein Binding Peptide Structures and Sequences
2006 StandoutNobel
Global, In Vivo, and Site-Specific Phosphorylation Dynamics in Signaling Networks
2006 Standout
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
2010 Standout
Intrinsic Protein Disorder and Interaction Promiscuity Are Widely Associated with Dosage Sensitivity
2009
Structural Basis for the Autoinhibition of c-Abl Tyrosine Kinase
2003 Standout
Computational Design of a New Hydrogen Bond Network and at Least a 300-fold Specificity Switch at a Protein−Protein Interface
2006 StandoutNobel
Systematic Discovery of New Recognition Peptides Mediating Protein Interaction Networks
2005
Exploring the repeat protein universe through computational protein design
2015 StandoutNatureNobel
Programmable design of orthogonal protein heterodimers
2018 StandoutNatureNobel
Autophagy-related Protein 32 Acts as Autophagic Degron and Directly Initiates Mitophagy
2012 StandoutNobel
Peptides mediating interaction networks: new leads at last
2006
MINT, the molecular interaction database: 2009 update
2009
Virus-host protein interactions in RNA viruses
2010
A General Computational Approach for Repeat Protein Design
2014 StandoutNobel
β-Arrestin2 mediates the initiation and progression of myeloid leukemia
2012 StandoutNobel
A Novel Proteomic Screen for Peptide-Protein Interactions
2004
Proline Rich Motifs as Drug Targets in Immune Mediated Disorders
2012
Specificity and versatility of SH3 and other proline-recognition domains: structural basis and implications for cellular signal transduction
2005
De novo design of protein homo-oligomers with modular hydrogen-bond network–mediated specificity
2016 StandoutScienceNobel
Iterative in Situ Click Chemistry Assembles a Branched Capture Agent and Allosteric Inhibitor for Akt1
2011 StandoutNobel
The Structure and Function of Proline Recognition Domains
2003
Peptide-binding specificity prediction using fine-tuned protein structure prediction networks
2023 StandoutNobel
Targeting of the tail-anchored peroxisomal membrane proteins PEX26 and PEX15 occurs through C-terminal PEX19-binding sites
2006
Classification of Intrinsically Disordered Regions and Proteins
2014 Standout
Overriding Imatinib Resistance with a Novel ABL Kinase Inhibitor
2004 StandoutScience
The NMR–Rosetta capsid model of M13 bacteriophage reveals a quadrupled hydrophobic packing epitope
2015 StandoutNobel
Short Linear Motifs: Ubiquitous and Functionally Diverse Protein Interaction Modules Directing Cell Regulation
2014
The Biologically Relevant Targets and Binding Affinity Requirements for the Function of the Yeast Actin-Binding Protein 1 Src-Homology 3 Domain Vary With Genetic Context
2007
The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest
2022 Standout
Surface Plasmon Resonance Sensors for Detection of Chemical and Biological Species
2008 Standout
Integrating Diverse Data for Structure Determination of Macromolecular Assemblies
2008
Complex Portal 2022: new curation frontiers
2021
Phospholipase A2Enzymes: Physical Structure, Biological Function, Disease Implication, Chemical Inhibition, and Therapeutic Intervention
2011 Standout
Ankyrin Repeat: A Unique Motif Mediating Protein−Protein Interactions
2006
The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets
2020 Standout
Histone Deacetylases in Herpesvirus Replication and Virus-Stimulated Host Defense
2013
Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3
2008 StandoutNobel
Filamentous Phage Display in the New Millennium
2005
RosettaRemodel: A Generalized Framework for Flexible Backbone Protein Design
2011 StandoutNobel
Algorithms and tools for protein–protein interaction networks clustering, with a special focus on population-based stochastic methods
2014
Works of Simona Panni being referenced
The IMEx coronavirus interactome: an evolving map of Coronaviridae –host molecular interactions
2020
In Vitro Evolution of Recognition Specificity Mediated by SH3 Domains Reveals Target Recognition Rules
2002
Selectivity and promiscuity in the interaction network mediated by protein recognition modules
2004
Can we infer peptide recognition specificity mediated by SH3 domains?
2002
Protein Interaction Networks by Proteome Peptide Scanning
2004
Asymmetric Comparison and Querying of Biological Networks
2011
Alternative Bacteriophage Display Systems
2012
Domain repertoires as a tool to derive protein recognition rules
2000
VirusMINT: a viral protein interaction database
2008
HuPho: the human phosphatase portal
2012
Searching for repetitions in biological networks: methods, resources and tools
2013