Citation Impact

Citing Papers

2018 Guidelines for the Early Management of Patients With Acute Ischemic Stroke: A Guideline for Healthcare Professionals From the American Heart Association/American Stroke Association
2018 Standout
NCBI Taxonomy: a comprehensive update on curation, resources and tools
2020 Standout
Management of Helicobacter pylori infection—the Maastricht V/Florence Consensus Report
2016 Standout
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
2014 Standout
The gut mycobiome of the Human Microbiome Project healthy cohort
2017 Standout
ColabFold: making protein folding accessible to all
2022 Standout
GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes
2020 Standout
A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes
2013 Standout
An integrated map of genetic variation from 1,092 human genomes
2012 StandoutNature
Characterization of soil nematode communities in three cropping systems through morphological and DNA metabarcoding approaches
2018
Comparative venom gland transcriptome surveys of the saw-scaled vipers (Viperidae: Echis) reveal substantial intra-family gene diversity and novel venom transcripts
2009
Environmental DNA reveals that rivers are conveyer belts of biodiversity information
2016
Embracing the unknown: disentangling the complexities of the soil microbiome
2017 Standout
Towards next‐generation biodiversity assessment using DNA metabarcoding
2012
Characterization of the 18S rRNA Gene for Designing Universal Eukaryote Specific Primers
2014
Soil natural capital in europe; a framework for state and change assessment
2017
Identifying localized biases in large datasets: A case study using the avian tree of life
2013
To name or not to name: Criteria to promote economy of change in Linnaean classification schemes
2013
Nano-based smart pesticide formulations: Emerging opportunities for agriculture
2018 Standout
Glacial history of the alpine herb Rumex Nivalis (Polygonaceae): a comparison of common phylogeographic methods with nested clade analysis
2002
De novo assembly and genotyping of variants using colored de Bruijn graphs
2012
Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible
2014 Standout
Gut microbiota functions: metabolism of nutrients and other food components
2017 Standout
Agricultural expansion and its impacts on tropical nature
2014 Standout
The Deep Origin and Recent Loss of Venom Toxin Genes in Rattlesnakes
2016
Molecular evidence for glacial refugia of mountain plants in the European Alps
2005 Standout
Plant–microbiome interactions: from community assembly to plant health
2020 Standout
Rock squirrel (Spermophilus variegatus) blood sera affects proteolytic and hemolytic activities of rattlesnake venoms
2010
jMOTU and Taxonerator: Turning DNA Barcode Sequences into Annotated Operational Taxonomic Units
2011
Forgotten fungi—the gut mycobiome in human health and disease
2017
Complex cocktails: the evolutionary novelty of venoms
2012 Standout
The integrative future of taxonomy
2010 Standout
Snakebite envenoming
2017 Standout
High throughput sequencing methods and analysis for microbiome research
2013
An assessment of the global impact of 21st century land use change on soil erosion
2017 Standout
History and evolution of the arctic flora: in the footsteps of Eric Hultén
2003 Standout
Analysing Microbial Community Composition through Amplicon Sequencing: From Sampling to Hypothesis Testing
2017
The tortoise and the hare II: relative utility of 21 noncoding chloroplast DNA sequences for phylogenetic analysis
2005 Standout
MetaEuk—sensitive, high-throughput gene discovery, and annotation for large-scale eukaryotic metagenomics
2020
A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing
2015 StandoutNature
Geographic Variation in Venom Allelic Composition and Diets of the Widespread Predatory Marine Gastropod Conus ebraeus
2009
A DNA-Based Registry for All Animal Species: The Barcode Index Number (BIN) System
2013 Standout
Bayesian mixed models and the phylogeny of pitvipers (Viperidae: Serpentes)
2006
A systematic comparison of chloroplast genome assembly tools
2020
Venom gland transcriptomics for identifying, cataloging, and characterizing venom proteins in snakes
2014
Near-optimal probabilistic RNA-seq quantification
2016 Standout
Soup to Tree: The Phylogeny of Beetles Inferred by Mitochondrial Metagenomics of a Bornean Rainforest Sample
2015
Survival in hostile territory: the microbiota of the stomach
2013
Long livestock farming history and human landscape shaping revealed by lake sediment DNA
2014 Standout
Next‐generation sequencing technologies for environmental DNA research
2012
Microbial Diversity in a Hypersaline Sulfate Lake: A Terrestrial Analog of Ancient Mars
2017 StandoutNobel
Dramatic Shifts in Benthic Microbial Eukaryote Communities following the Deepwater Horizon Oil Spill
2012
Optimal Eukaryotic 18S and Universal 16S/18S Ribosomal RNA Primers and Their Application in a Study of Symbiosis
2014
What we know and don’t know about Earth's missing biodiversity
2012
Evolutionary history of Coleoptera revealed by extensive sampling of genes and species
2018 Standout
Groundtruthing Next-Gen Sequencing for Microbial Ecology–Biases and Errors in Community Structure Estimates from PCR Amplicon Pyrosequencing
2012
Environmental effects of the Deepwater Horizon oil spill: A review
2016 Standout
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
2015 Standout
Genome-Based Taxonomic Classification of the Phylum Actinobacteria
2018 Standout
Robustly detecting differential expression in RNA sequencing data using observation weights
2014
Biodiversity soup: metabarcoding of arthropods for rapid biodiversity assessment and biomonitoring
2012
FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
2015 Standout
Delimiting Species in Recent Radiations
2007
Real‐time PCR assay to detect brown marmorated stink bug, Halyomorpha halys (Stål), in environmental DNA
2016
Soil quality – A critical review
2018 Standout
Validation and Development of COI Metabarcoding Primers for Freshwater Macroinvertebrate Bioassessment
2017
A Total-Evidence Approach to Dating with Fossils, Applied to the Early Radiation of the Hymenoptera
2012 Standout
Tree diversity and species identity effects on soil fungi, protists and animals are context dependent
2015
Divergence Time Estimation Using Fossils as Terminal Taxa and the Origins of Lissamphibia
2011
Biogeographic patterns in below-ground diversity in New York City's Central Park are similar to those observed globally
2014
Chemical language and warfare of bacterial natural products in bacteria–nematode–insect interactions
2018
The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications
2018 Standout
GenBank is a reliable resource for 21st century biodiversity research
2019
How Many Species of Insects and Other Terrestrial Arthropods Are There on Earth?
2017 Standout
Ending the drought: New strategies for improving the flow of affordable, effective antivenoms in Asia and Africa
2011
DNA Barcoding of Marine Metazoa
2010
The biodiversity of species and their rates of extinction, distribution, and protection
2014 StandoutScience
Genome-wide identification of neuronal activity-regulated genes in Drosophila
2016 StandoutNobel
Population‐level consequences for wild fish exposed to sublethal concentrations of chemicals – a critical review
2015
Fungal community analysis by high‐throughput sequencing of amplified markers – a user's guide
2013
Impact of the Invasive Brown Marmorated Stink Bug in North America and Europe: History, Biology, Ecology, and Management
2017 Standout
Population-relevant endpoints in the evaluation of endocrine-active substances (EAS) for ecotoxicological hazard and risk assessment
2017
Minor revision to V4 region SSU rRNA 806R gene primer greatly increases detection of SAR11 bacterioplankton
2015 Standout
Soil biodiversity and DNA barcodes: opportunities and challenges
2014
Effect of Routine Low-Dose Oxygen Supplementation on Death and Disability in Adults With Acute Stroke
2017
Species Delimitation Using a Combined Coalescent and Information-Theoretic Approach: An Example from North American Myotis Bats
2010
Emerging threats and persistent conservation challenges for freshwater biodiversity
2018 Standout
Defaunation in the Anthropocene
2014 StandoutScience
PhyloSift: phylogenetic analysis of genomes and metagenomes
2014
Mycorrhizal ecology and evolution: the past, the present, and the future
2015 Standout
A general species delimitation method with applications to phylogenetic placements
2013 Standout
Metabolic network modeling of microbial communities
2015
ASTRAL: genome-scale coalescent-based species tree estimation
2014 Standout
Microplastics as an emerging threat to terrestrial ecosystems
2017 Standout
Increasing human dominance of tropical forests
2015 StandoutScience
Lys49 myotoxin from the Brazilian lancehead pit viper elicits pain through regulated ATP release
2017 StandoutNobel
Parsing ecological signal from noise in next generation amplicon sequencing
2014
Coevolution of diet and prey-specific venom activity supports the role of selection in snake venom evolution
2009

Works of Simon Creer being referenced

Second-generation environmental sequencing unmasks marine metazoan biodiversity
2010
Annual time-series analysis of aqueous eDNA reveals ecologically relevant dynamics of lake ecosystem biodiversity
2017
Environmental DNA for wildlife biology and biodiversity monitoring
2014
Ultrasequencing of the meiofaunal biosphere: practice, pitfalls and promises
2010
Sample richness and genetic diversity as drivers of chimera formation in nSSU metagenetic analyses
2012
Targeting optimal introns for phylogenetic analyses in non‐model taxa: experimental results in Asian pitvipers
2005
Offshore Insular Variation in the Diet of the Taiwanese Bamboo Viper Trimeresurus stejnegeri (Schmidt)
2002
Sequencing our way towards understanding global eukaryotic biodiversity
2012
The importance of being genomic: Non-coding and coding sequences suggest different models of toxin multi-gene family evolution
2015
Genetic and Ecological Correlates of Intraspecific Variation in Pitviper Venom Composition Detected Using Matrix-Assisted Laser Desorption Time-of-Flight Mass Spectrometry (MALDI-TOF-MS) and Isoelectric Focusing
2003
Competition and phylogeny determine community structure in Müllerian co-mimics
2010 Nature
Inclusion of nuclear intron sequence data helps to identify the Asian sister group of New World pitvipers
2009
Assessing the Phylogenetic Utility of Four Mitochondrial Genes and a Nuclear Intron in the Asian Pit Viper Genus, Trimeresurus: Separate, Simultaneous, and Conditional Data Combination Analyses
2003
Optimal Intron Analyses in the Trimeresurus Radiation of Asian Pitvipers
2006
How quantitative is metabarcoding: A meta‐analytical approach
2018
Transcriptomics and in vivo tests reveal novel mechanisms underlying endocrine disruption in an ecological sentinel, Nucella lapillus
2012
Choosing and using introns in molecular phylogenetics.
2007
Environmental metabarcoding reveals heterogeneous drivers of microbial eukaryote diversity in contrasting estuarine ecosystems
2014
The ecologist's field guide to sequence‐based identification of biodiversity
2016
Choosing and Using Introns in Molecular Phylogenetics
2007
Environmental DNA metabarcoding: Transforming how we survey animal and plant communities
2017
Isolation of marine meiofauna from sandy sediments: from decanting to DNA extraction.
2011
Experimental harvesting of fish populations drives genetically based shifts in body size and maturation
2013
Multiple causation of phylogeographical pattern as revealed by nested clade analysis of the bamboo viper (Trimeresurus stejnegeri) within Taiwan
2001
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