Citation Impact
Citing Papers
CRISPR–Cas9 Structures and Mechanisms
2017 StandoutNobel
Origins of Specificity in Protein-DNA Recognition
2010
The mucin-selective protease StcE enables molecular and functional analysis of human cancer-associated mucins
2019 StandoutNobel
DNA interrogation by the CRISPR RNA-guided endonuclease Cas9
2014 StandoutNatureNobel
dCas9 fusion to computer-designed PRC2 inhibitor reveals functional TATA box in distal promoter region
2022 StandoutNobel
Quantification of mRNA and protein and integration with protein turnover in a bacterium
2011
Protein interactions in human pathogens revealed through deep learning
2024 StandoutNobel
Structural Basis of Transcription: Role of the Trigger Loop in Substrate Specificity and Catalysis
2006 StandoutNobel
Non-canonical CRP sites control competence regulons in Escherichia coli and many other γ-proteobacteria
2006
Decision-making in structure solution using Bayesian estimates of map quality: thePHENIX AutoSolwizard
2009
Haemostatic materials for wound healing applications
2021 Standout
Assessment of the optimization of affinity and specificity at protein–DNA interfaces
2009 StandoutNobel
phenix.mr_rosetta: molecular replacement and model rebuilding with Phenix and Rosetta
2012 StandoutNobel
Crystal Structure of Cas9 in Complex with Guide RNA and Target DNA
2014 Standout
3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures
2008
Identification of endoribonuclease specific cleavage positions reveals novel targets of RNase III inStreptococcus pyogenes
2017 StandoutNobel
Downstream DNA Selectively Affects a Paused Conformation of Human RNA Polymerase II
2004
Rapid model building of α-helices in electron-density maps
2010
The Human Transcription Factors
2018 Standout
Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning
2015 Standout
Structure-guided mutagenesis of a mucin-selective metalloprotease from Akkermansia muciniphila alters substrate preferences
2022 StandoutNobel
Key role of the REC lobe during CRISPR–Cas9 activation by ‘sensing’, ‘regulating’, and ‘locking’ the catalytic HNH domain
2018 StandoutNobel
The contribution of metal ions to the structural stability of the large ribosomal subunit
2004 StandoutNobel
The role of DNA shape in protein–DNA recognition
2009 Nature
Identification and Characterization of the Host Protein DNAJC14 as a Broadly Active Flavivirus Replication Modulator
2011 StandoutNobel
Optimisation of the anaerobic digestion of agricultural resources
2008 Standout
Protein–DNA Interactions: Amino Acid Conservation and the Effects of Mutations on Binding Specificity
2002
Management of biological sewage sludge: Fertilizer nitrogen recovery as the solution to fertilizer crisis
2022 Standout
Protein sequence optimization with a pairwise decomposable penalty for buried unsatisfied hydrogen bonds
2021 StandoutNobel
The ABC-F protein EttA gates ribosome entry into the translation elongation cycle
2014 StandoutNobel
Nucleotide Excision Repair in E. Coli and Man
2004 StandoutNobel
Intrinsically disordered proteins in cellular signalling and regulation
2014 Standout
Nucleic acid solvation: from outside to insight
2007
DNA sequence and structure: direct and indirect recognition inprotein-DNA binding
2002
A short guide for molecular dynamics simulations of RNA systems
2008
Redesigning the Specificity of Protein–DNA Interactions with Rosetta
2014 StandoutNobel
Convergent evolution of clamp-like binding sites in diverse chaperones
2006
Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM
2009 StandoutNobel
Improved Modeling of Side-Chain–Base Interactions and Plasticity in Protein–DNA Interface Design
2012 StandoutNobel
A model for initial DNA lesion recognition by NER and MMR based on local conformational flexibility
2004
The phosphodiesterase activity of the HmsP EAL domain is required for negative regulation of biofilm formation inYersinia pestis
2005
Relating protein pharmacology by ligand chemistry
2007 Standout
Consistent refinement of submitted models at CASP using a knowledge‐based potential
2010 StandoutNobel
Quality Control and Validation
2006
Mechanism of substrate selection by a highly specific CRISPR endoribonuclease
2012 StandoutNobel
Agricultural waste management strategies for environmental sustainability
2021 Standout
Insights into the regulation of protein abundance from proteomic and transcriptomic analyses
2012 Standout
PHENIX: a comprehensive Python-based system for macromolecular structure solution
2010 Standout
Enzyme classification by ligand binding
2004
Conserved Bacterial RNase YbeY Plays Key Roles in 70S Ribosome Quality Control and 16S rRNA Maturation
2012
Potential influences of exogenous pollutants occurred in waste activated sludge on anaerobic digestion: A review
2019
Generating Triangulated Macromolecular Surfaces by Euclidean Distance Transform
2009
SCWRL and MolIDE: computer programs for side-chain conformation prediction and homology modeling
2008
Anion Binding to Nucleic Acids
2004
Modeling nucleic acids
2012 StandoutNobel
A Cas9–guide RNA complex preorganized for target DNA recognition
2015 StandoutScienceNobel
Polymeric Hydrogel Systems as Emerging Biomaterial Platforms to Enable Hemostasis and Wound Healing
2020
Absence of YbeY RNase compromises the growth and enhances the virulence plasmid gene expression of Yersinia enterocolitica O:3
2014
Effects of heavy metals as stress factors on anaerobic digestion processes and biogas production from biomass
2013
Clustering to identify RNA conformations constrained by secondary structure
2011 StandoutNobel
Modeling and design by hierarchical natural moves
2012 StandoutNobel
Comparative Protein Structure Modeling Using MODELLER
2016 Standout
Classification of Intrinsically Disordered Regions and Proteins
2014 Standout
Cyclic di-GMP: the First 25 Years of a Universal Bacterial Second Messenger
2013 Standout
Determination of Alkali and Halide Monovalent Ion Parameters for Use in Explicitly Solvated Biomolecular Simulations
2008 Standout
RNA Structural Dynamics As Captured by Molecular Simulations: A Comprehensive Overview
2018
Architecture and function of metallopeptidase catalytic domains
2013
2016
Comparative Protein Structure Modeling Using MODELLER
2007 Standout
Hydrogen production from renewable and sustainable energy resources: Promising green energy carrier for clean development
2016 Standout
Antimicrobial Resistance in ESKAPE Pathogens
2020 Standout
Works of Shengfeng Chen being referenced
Signatures of Protein-DNA Recognition in Free DNA Binding Sites
2009
Structure of the hypotheticalMycoplasmaprotein MPN555 suggests a chaperone function
2005
Structural and Functional Characterization of a Novel Phosphodiesterase from Methanococcus jannaschii
2004
Structure of the hypothetical protein AQ_1354 fromAquifex aeolicus
2003
Crystal structure of a protein associated with cell division from Mycoplasma pneumoniae (GI: 13508053): A novel fold with a conserved sequence motif
2004
Advances in injectable self-healing biomedical hydrogels
2019
Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: DNA binding specificity based on energetics of DNA kinking
2001
Checking nucleic acid crystal structures
2001
Indirect readout of DNA sequence at the primary-kink site in the CAP-DNA complex: alteration of DNA binding specificity through alteration of DNA kinking
2001
Structure-based functional inference in structural genomics
2003