Citation Impact

Citing Papers

Phylogenetic and Chemical Diversity of Three Chemotypes of Bloom-Forming Lyngbya Species ( Cyanobacteria : Oscillatoriales ) from Reefs of Southeastern Florida
2009
The biomass distribution on Earth
2018 Standout
Viruses in the Oceanic Basement
2017
Every base matters: assessing small subunit rRNA primers for marine microbiomes with mock communities, time series and global field samples
2015 Standout
Systematic discovery of antiphage defense systems in the microbial pangenome
2018 Science
Deep-sea vent ε-proteobacterial genomes provide insights into emergence of pathogens
2007
Unicellular Cyanobacterium Symbiotic with a Single-Celled Eukaryotic Alga
2012 Science
Development and quantitative analyses of a universal rRNA-subtraction protocol for microbial metatranscriptomics
2010
Shotgun metaproteomics of the human distal gut microbiota
2008
The Pseudomonas aeruginosa accessory genome elements influence virulence towards Caenorhabditis elegans
2019 StandoutNobel
A critical assessment of the “sterile womb” and “in utero colonization” hypotheses: implications for research on the pioneer infant microbiome
2017 Standout
Molecular ecological network analyses
2012 Standout
High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries
2018 Standout
VIROME: a standard operating procedure for analysis of viral metagenome sequences
2012
Distribution of nitrogen fixation and nitrogenase-like sequences amongst microbial genomes
2012
Embracing the unknown: disentangling the complexities of the soil microbiome
2017 Standout
Laboratory procedures to generate viral metagenomes
2009
Exploring the viral world through metagenomics
2011
The elemental composition of virus particles: implications for marine biogeochemical cycles
2014
Gut microbiota functions: metabolism of nutrients and other food components
2017 Standout
A complex journey: transmission of microbial symbionts
2010
Linking bacterial identities and ecosystem processes: can ‘omic’ analyses be more than the sum of their parts?
2010
Human Genetics Shape the Gut Microbiome
2014 Standout
The dynamic genetic repertoire of microbial communities
2008
New CRISPR–Cas systems from uncultivated microbes
2016 StandoutNatureNobel
Viruses in the faecal microbiota of monozygotic twins and their mothers
2010 StandoutNature
The oral microbiome in health and disease
2012 Standout
The role of the gut microbiota in nutrition and health
2012 Standout
The rhizosphere microbiome: significance of plant beneficial, plant pathogenic, and human pathogenic microorganisms
2013 Standout
Doubling of marine dinitrogen-fixation rates based on direct measurements
2012 Nature
Coordinated Transcription of Key Pathways in the Mouse by the Circadian Clock
2002 Standout
Microbial community structure and its functional implications
2009 Nature
The Pacific Ocean Virome (POV): A Marine Viral Metagenomic Dataset and Associated Protein Clusters for Quantitative Viral Ecology
2013
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
2013 Standout
Biological roles of glycans
2016 Standout
The online database MaarjAM reveals global and ecosystemic distribution patterns in arbuscular mycorrhizal fungi (Glomeromycota)
2010 Standout
Implications of circadian gene expression in kidney, liver and the effects of fasting on pharmacogenomic studies
2002
Genomic analysis of multiple Roseophage SIO1 strains
2009
Annotating Functional RNAs in Genomes Using Infernal
2013
Memory of viral infections by CRISPR-Cas adaptive immune systems: Acquisition of new information
2012 StandoutNobel
Environmental factors influencing the development and spread of antibiotic resistance
2017 Standout
RNA-guided genetic silencing systems in bacteria and archaea
2012 StandoutNatureNobel
Microbial interactions: from networks to models
2012 Standout
Comparative analysis of carboxysome shell proteins
2011
Is the distribution of nitrogen‐fixing cyanobacteria in the oceans related to temperature?
2009
Persistence of soil organic matter as an ecosystem property
2011 StandoutNature
Microbial community proteomics: elucidating the catalysts and metabolic mechanisms that drive the Earth's biogeochemical cycles
2009
Learning how to live together: genomic insights into prokaryote–animal symbioses
2008 Standout
Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage
2013 StandoutNature
The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks
2013 Standout
Outer-membrane vesicles from Gram-negative bacteria: biogenesis and functions
2015 Standout
Keystone taxa as drivers of microbiome structure and functioning
2018 Standout
Metatranscriptomic Analysis of Sulfur Oxidation Genes in the Endosymbiont of Solemya Velum
2011
Genomic and functional adaptation in surface ocean planktonic prokaryotes
2010 Nature
NCBI prokaryotic genome annotation pipeline
2016 Standout
Diversity, stability and resilience of the human gut microbiota
2012 StandoutNature
Coordination of circadian timing in mammals
2002 StandoutNature
MMseqs2 enables sensitive protein sequence searching for the analysis of massive data sets
2017 Standout
A Metagenomic Approach to Cyanobacterial Genomics
2017
The microbial nitrogen-cycling network
2018 Standout
Cyanobacterial blooms
2018 Standout
Evidence of a robust resident bacteriophage population revealed through analysis of the human salivary virome
2011
STAMP: statistical analysis of taxonomic and functional profiles
2014 Standout
Gut Microbiota in Health and Disease
2010 Standout
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
2012 Standout
Microbial Metagenomics: Beyond the Genome
2010
SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data
2012 Standout
Soil enzymes in a changing environment: Current knowledge and future directions
2012 Standout
Marine Viruses: Truth or Dare
2011
Interactions between changing pCO2, N2 fixation, and Fe limitation in the marine unicellular cyanobacterium Crocosphaera
2008
Phylogenetic conservatism of functional traits in microorganisms
2012
Estimates of viral abundance in soils are strongly influenced by extraction and enumeration methods
2013
Decoupling function and taxonomy in the global ocean microbiome
2016 StandoutScience
Small Genomes and Sparse Metabolisms of Sediment-Associated Bacteria from Four Candidate Phyla
2013
Temperature and soil organic matter decomposition rates - synthesis of current knowledge and a way forward
2011 Standout
Programmed DNA destruction by miniature CRISPR-Cas14 enzymes
2018 StandoutScienceNobel
A global census of nitrogenase diversity
2011
Integrated metagenomic and metaproteomic analyses of an ANME‐1‐dominated community in marine cold seep sediments
2012
The human gut and groundwater harbor non-photosynthetic bacteria belonging to a new candidate phylum sibling to Cyanobacteria
2013
A Two-Component Regulatory System Impacts Extracellular Membrane-Derived Vesicle Production in Group A Streptococcus
2016 StandoutNobel
Mechanism of Nitrogen Fixation by Nitrogenase: The Next Stage
2014 Standout
Gene Transfer Potential of Outer Membrane Vesicles of Acinetobacter baylyi and Effects of Stress on Vesiculation
2014
Nitrogen Fixation and Hydrogen Metabolism in Cyanobacteria
2010
Frontiers, Opportunities, and Challenges in Biochemical and Chemical Catalysis of CO2 Fixation
2013 Standout
The First Microbial Colonizers of the Human Gut: Composition, Activities, and Health Implications of the Infant Gut Microbiota
2017 Standout
Stochastic Community Assembly: Does It Matter in Microbial Ecology?
2017 Standout
Catalysis for CO2 conversion: a key technology for rapid introduction of renewable energy in the value chain of chemical industries
2013 Standout
Use of Cellular CRISPR (Clusters of Regularly Interspaced Short Palindromic Repeats) Spacer-Based Microarrays for Detection of Viruses in Environmental Samples
2010
Metagenome analysis of an extreme microbial symbiosis reveals eurythermal adaptation and metabolic flexibility
2008
The rise of harmful cyanobacteria blooms: The potential roles of eutrophication and climate change
2011 Standout
Genomic resolution of a cold subsurface aquifer community provides metabolic insights for novel microbes adapted to high CO 2 concentrations
2016
The marine nitrogen cycle: recent discoveries, uncertainties and the potential relevance of climate change
2013
Biosynthesis and synthesis of natural colours
2009
Recent advancements in natural dye applications: a review
2013 Standout
Short-term observations of marine bacterial and viral communities: patterns, connections and resilience
2013

Works of Shellie R. Bench being referenced

Low genomic diversity in tropical oceanic N 2 -fixing cyanobacteria
2007
Globally Distributed Uncultivated Oceanic N 2 -Fixing Cyanobacteria Lack Oxygenic Photosystem II
2008 Science
In situ transcriptomic analysis of the globally important keystone N2-fixing taxon Crocosphaera watsonii
2009
Lysogenic virus–host interactions predominate at deep-sea diffuse-flow hydrothermal vents
2008
Isolation Independent Methods of Characterizing Phage Communities 2: Characterizing a Metagenome
2009
Metabolic streamlining in an open-ocean nitrogen-fixing cyanobacterium
2010 Nature
Metabolic versatility of the Riftia pachyptila endosymbiont revealed through metagenomics
2008
Methods for the Isolation of Viruses from Environmental Samples
2009
Expression and splicing of FGF receptor mRNAs during APRE-19 cell differentiation in vitro.
2000
Repeating patterns of virioplankton production within an estuarine ecosystem
2011
Metagenomic Characterization of Chesapeake Bay Virioplankton
2007
Physiological Proteomics of the Uncultured Endosymbiont of Riftia pachyptila
2007 Science
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