Citation Impact

Citing Papers

Single-Molecule Imaging of an in Vitro -Evolved RNA Aptamer Reveals Homogeneous Ligand Binding Kinetics
2009 StandoutNobel
Structure of the Eukaryotic Thiamine Pyrophosphate Riboswitch with Its Regulatory Ligand
2006 Science
Poly(A) Tail Recognition by a Viral RNA Element Through Assembly of a Triple Helix
2010 ScienceNobel
Caenorhabditis elegans ADAR editing and the ERI-6/7/MOV10 RNAi pathway silence endogenous viral elements and LTR retrotransposons
2020 StandoutNobel
Plants send small RNAs in extracellular vesicles to fungal pathogen to silence virulence genes
2018 StandoutScience
Structural inference of native and partially folded RNA by high-throughput contact mapping
2008 StandoutNobel
PIEZO ion channel is required for root mechanotransduction in Arabidopsis thaliana
2021 StandoutNobel
De novo design of allosterically switchable protein assemblies
2024 StandoutNatureNobel
The EGLN-HIF O 2 -Sensing System: Multiple Inputs and Feedbacks
2017 StandoutNobel
Structural basis for activity of highly efficient RNA mimics of green fluorescent protein
2014
The Ligand-Free State of the TPP Riboswitch: A Partially Folded RNA Structure
2009
Analysis of Four-Way Junctions in RNA Structures
2009
lincRNAs: Genomics, Evolution, and Mechanisms
2013 Standout
MicroRNAs from the parasitic plant Cuscuta campestris target host messenger RNAs
2018 Nature
MUT-14 and SMUT-1 DEAD Box RNA Helicases Have Overlapping Roles in Germline RNAi and Endogenous siRNA Formation
2014 StandoutNobel
PIWI Associated siRNAs and piRNAs Specifically Require the Caenorhabditis elegans HEN1 Ortholog henn-1
2012 StandoutNobel
Selection and evolution of enzymes from a partially randomized non-catalytic scaffold
2007 StandoutNatureNobel
Metal-ion binding and metal-ion induced folding of the adenine-sensing riboswitch aptamer domain
2007
MUT-16 promotes formation of perinuclear Mutator foci required for RNA silencing in the C. elegans germline
2012 StandoutNobel
Identification of small RNA pathway genes using patterns of phylogenetic conservation and divergence
2012 StandoutNatureNobel
Molecular dynamics simulation study of the binding of purine bases to the aptamer domain of the guanine sensing riboswitch
2009
Translation initiation: structures, mechanisms and evolution
2004
Halogen bonds in crystal TTF derivatives: an ab initio quantum mechanical study
2013
Topology of three-way junctions in folded RNAs
2005
RNA-based recognition and targeting: sowing the seeds of specificity
2017 StandoutNobel
Folding of the Adenine Riboswitch
2006
Genome-Scale CRISPR-Mediated Control of Gene Repression and Activation
2014 Standout
Visualizing transient Watson–Crick-like mispairs in DNA and RNA duplexes
2015 Nature
RNABC: forward kinematics to reduce all-atom steric clashes in RNA backbone
2007
Incorporation of pseudouridine into mRNA enhances translation by diminishing PKR activation
2010 StandoutNobel
Nonbonding interactions of organic halogens in biological systems: implications for drug discovery and biomolecular design
2010
On the significance of an RNA tertiary structure prediction
2010
Two RNA-binding motifs in eIF3 direct HCV IRES-dependent translation
2013 StandoutNobel
Riboswitches as versatile gene control elements
2005
The surveillance of pre-mRNA splicing is an early step in C. elegans RNAi of endogenous genes
2018 StandoutNobel
piRNAs and piRNA-Dependent siRNAs Protect Conserved and Essential C. elegans Genes from Misrouting into the RNAi Pathway
2015 StandoutNobel
A Broad-Spectrum Inhibitor of CRISPR-Cas9
2017 StandoutNobel
Tertiary Motifs Revealed in Analyses of Higher-Order RNA Junctions
2009
Structure of mammalian eIF3 in the context of the 43S preinitiation complex
2015 StandoutNatureNobel
Multiple small RNA pathways regulate the silencing of repeated and foreign genes in C. elegans
2013 StandoutNobel
Origin, Biogenesis, and Activity of Plant MicroRNAs
2009 Standout
Local RNA structural changes induced by crystallization are revealed by SHAPE
2007 Nobel
Advances in RNA structure analysis by chemical probing
2010
De novo design of a fluorescence-activating β-barrel
2018 StandoutNatureNobel
ShapeFinder: A software system for high-throughput quantitative analysis of nucleic acid reactivity information resolved by capillary electrophoresis
2008
The Morpheein Model of Allostery: Evaluating Proteins as Potential Morpheeins
2011
Dynamics of the base of ribosomal A-site finger revealed by molecular dynamics simulations and Cryo-EM
2009 StandoutNobel
Chemical biology at the crossroads of molecular structure and mechanism
2005 StandoutNobel
Ligand‐Induced Folding of the Adenosine Deaminase A‐Riboswitch and Implications on Riboswitch Translational Control
2007
Crystal Structure of the Minimal Cas9 from Campylobacter jejuni Reveals the Molecular Diversity in the CRISPR-Cas9 Systems
2017
The Noncoding RNA Revolution—Trashing Old Rules to Forge New Ones
2014 Standout
Dynamic refolding of IFN-γ mRNA enables it to function as PKR activator and translation template
2009
PHENIX: a comprehensive Python-based system for macromolecular structure solution
2010 Standout
Hepatitis C virus 3′UTR regulates viral translation through direct interactions with the host translation machinery
2013 StandoutNobel
The Biology of CRISPR-Cas: Backward and Forward
2018 StandoutNobel
Structural Basis for Discriminative Regulation of Gene Expression by Adenine- and Guanine-Sensing mRNAs
2004
The UA_handle: a versatile submotif in stable RNA architectures†
2008
Long Noncoding RNAs: Cellular Address Codes in Development and Disease
2013 Standout
Amino acid recognition and gene regulation by riboswitches
2009
New tools provide a second look at HDV ribozyme structure, dynamics and cleavage
2014 StandoutNobel
Small RNAs are modified with N-glycans and displayed on the surface of living cells
2021 StandoutNobel
Structure of the Mammalian Ribosomal 43S Preinitiation Complex Bound to the Scanning Factor DHX29
2013 StandoutNobel
Massively parallel kinetic profiling of natural and engineered CRISPR nucleases
2020 StandoutNobel
Repurposing CRISPR as an RNA-Guided Platform for Sequence-Specific Control of Gene Expression
2013 StandoutNobel
Functional Nucleic Acid Sensors
2009 Standout
Modeling and automation of sequencing-based characterization of RNA structure
2011 StandoutNobel
Multiplexed RNA structure characterization with selective 2′-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq)
2011 StandoutNobel
The Molecular Interactions That Stabilize RNA Tertiary Structure: RNA Motifs, Patterns, and Networks
2011
Arabidopsis RNA-Dependent RNA Polymerases and Dicer-Like Proteins in Antiviral Defense and Small Interfering RNA Biogenesis during Turnip Mosaic Virus Infection 
2010
Genomes in Focus: Development and Applications of CRISPR‐Cas9 Imaging Technologies
2017 StandoutNobel
New Generation of Artificial MicroRNA and Synthetic Trans-Acting Small Interfering RNA Vectors for Efficient Gene Silencing in Arabidopsis
2014
Clustering to identify RNA conformations constrained by secondary structure
2011 StandoutNobel
RNAi-mediated immunity provides strong protection against the negative-strand RNA vesicular stomatitis virus in Drosophila
2010 StandoutNobel
Riboswitches: Emerging Themes in RNA Structure and Function
2008
Scalable Anisotropic Shape and Electrostatic Models for Biological Bromine Halogen Bonds
2012
Functional Aptamers and Aptazymes in Biotechnology, Diagnostics, and Therapy
2007
General Deoxyribozyme-Catalyzed Synthesis of Native 3‘−5‘ RNA Linkages
2005
Activatable Photosensitizers for Imaging and Therapy
2010 Standout
REGULATION OF BACTERIAL GENE EXPRESSION BY RIBOSWITCHES
2005
Electrogenerated Chemiluminescence and Its Biorelated Applications
2008 Standout
Influence of Constitution and Charge on Radical Pairing Interactions in Tris-radical Tricationic Complexes
2016 StandoutNobel
The Halogen Bond
2016 Standout
The Mononuclear Molybdenum Enzymes
2014 Standout
RCrane: semi-automated RNA model building
2012
mut-16 and other mutator class genes modulate 22G and 26G siRNA pathways in Caenorhabditis elegans
2011 StandoutNobel
The ERI-6/7 Helicase Acts at the First Stage of an siRNA Amplification Pathway That Targets Recent Gene Duplications
2011 StandoutNobel

Works of S.D. Gilbert being referenced

AGO1-miR173 complex initiates phased siRNA formation in plants
2008
Computational and analytical framework for small RNA profiling by high-throughput sequencing
2009
Structure of a natural guanine-responsive riboswitch complexed with the metabolite hypoxanthine
2004 Nature
Unique functionality of 22-nt miRNAs in triggering RDR6-dependent siRNA biogenesis from target transcripts in Arabidopsis
2010
Riboswitches: natural SELEXion
2005
Thermodynamic and Kinetic Characterization of Ligand Binding to the Purine Riboswitch Aptamer Domain
2006
Adaptive Ligand Binding by the Purine Riboswitch in the Recognition of Guanine and Adenine Analogs
2009
Ligand-dependent folding of the three-way junction in the purine riboswitch
2008
Structure of the SAM-II riboswitch bound to S-adenosylmethionine
2008
Allosterism and Cooperativity in Pseudomonas aeruginosa GDP-Mannose Dehydrogenase
2002
Structural Studies of the Purine and SAM Binding Riboswitches
2006
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