Citation Impact
Citing Papers
Characterizing and explaining the impact of disease-associated mutations in proteins without known structures or structural homologs
2022 StandoutNobel
Protein oligomer modeling guided by predicted interchain contacts in CASP14
2021 StandoutNobel
TCMSP: a database of systems pharmacology for drug discovery from herbal medicines
2014 Standout
HINT: High-quality protein interactomes and their applications in understanding human disease
2012
Metascape provides a biologist-oriented resource for the analysis of systems-level datasets
2019 Standout
jvenn: an interactive Venn diagram viewer
2014 Standout
Quantitative Proteomics Identifies Serum Response Factor Binding Protein 1 as a Host Factor for Hepatitis C Virus Entry
2015 StandoutNobel
DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants
2016 Standout
STRING v9.1: protein-protein interaction networks, with increased coverage and integration
2012 Standout
Computational Prediction of Protein–Protein Interactions
2004
The BioGRID interaction database: 2017 update
2016
The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function
2010 Standout
The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools
2011 Standout
Mutations at protein-protein interfaces: Small changes over big surfaces have large impacts on human health
2016
STRING v10: protein–protein interaction networks, integrated over the tree of life
2014 Standout
Tripartite degrons confer diversity and specificity on regulated protein degradation in the ubiquitin-proteasome system
2016
Reactome pathway analysis to enrich biological discovery in proteomics data sets
2011
The BioGRID Interaction Database: 2011 update
2010
HitPredict: a database of quality assessed protein–protein interactions in nine species
2010
A Human Interactome in Three Quantitative Dimensions Organized by Stoichiometries and Abundances
2015
The mini-driver model of polygenic cancer evolution
2015 StandoutNobel
HCVpro: Hepatitis C virus protein interaction database
2011
Hepatic Dysfunction Caused by Consumption of a High-Fat Diet
2017
The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible
2016 Standout
Expanding the computational toolbox for mining cancer genomes
2014
The trRosetta server for fast and accurate protein structure prediction
2021 StandoutNobel
A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape
2019 StandoutNobel
Pan-cancer network analysis identifies combinations of rare somatic mutations across pathways and protein complexes
2014
FunCoup 5: Functional Association Networks in All Domains of Life, Supporting Directed Links and Tissue-Specificity
2021
PrePPI: a structure-informed database of protein–protein interactions
2012
REVIGO Summarizes and Visualizes Long Lists of Gene Ontology Terms
2011 Standout
Systematic Evaluation of Molecular Networks for Discovery of Disease Genes
2018
The Perseus computational platform for comprehensive analysis of (prote)omics data
2016 Standout
The HADDOCK2.2 Web Server: User-Friendly Integrative Modeling of Biomolecular Complexes
2015 Standout
The economy of brain network organization
2012 Standout
A scored human protein–protein interaction network to catalyze genomic interpretation
2016
The BioGRID interaction database: 2013 update
2012
Prediction of C. elegans Longevity Genes by Human and Worm Longevity Networks
2012 StandoutNobel
Transcription Factor NRF2 as a Therapeutic Target for Chronic Diseases: A Systems Medicine Approach
2018 Standout
Network analysis of GWAS data
2013
2016 update of the PRIDE database and its related tools
2015 Standout
Integrated interactions database: tissue-specific view of the human and model organism interactomes
2015
Interactome Networks and Human Disease
2011
TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions
2017
New horizons for antiviral drug discovery from virus–host protein interaction networks
2012
Uncovering disease mechanisms through network biology in the era of Next Generation Sequencing
2016
PROTAC targeted protein degraders: the past is prologue
2022 Standout
FunCoup 3.0: database of genome-wide functional coupling networks
2013
Quantifying protein interaction dynamics by SWATH mass spectrometry: application to the 14-3-3 system
2013
Pathway and network analysis of cancer genomes
2015
The HCV Life Cycle: In vitro Tissue Culture Systems and Therapeutic Targets
2014 Standout
HIPPIE: Integrating Protein Interaction Networks with Experiment Based Quality Scores
2012
Transient protein-protein interactions
2011
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
2010 Standout
Scansite 2.0: proteome-wide prediction of cell signaling interactions using short sequence motifs
2003 Standout
FunCoup 4: new species, data, and visualization
2017
Maftools: efficient and comprehensive analysis of somatic variants in cancer
2018 Standout
MINT, the molecular interaction database: 2009 update
2009
APID interactomes: providing proteome-based interactomes with controlled quality for multiple species and derived networks
2016
Structural Bioinformatics of the Interactome
2014
Mapping of Protein-Protein Interactions: Web-Based Resources for Revealing Interactomes
2018
Genome-wide functional association networks: background, data & state-of-the-art resources
2019
Mechanisms of Insulin Action and Insulin Resistance
2018 Standout
Publishing DisGeNET as nanopublications
2016
HumanNet v3: an improved database of human gene networks for disease research
2021
Cytoscape Web: an interactive web-based network browser
2010
IID 2021: towards context-specific protein interaction analyses by increased coverage, enhanced annotation and enrichment analysis
2021
UCSF ChimeraX: Meeting modern challenges in visualization and analysis
2017 Standout
Integrative Analysis of Complex Cancer Genomics and Clinical Profiles Using the cBioPortal
2013 Standout
Self-assembly–based posttranslational protein oscillators
2020 StandoutNobel
The KEAP1-NRF2 System: a Thiol-Based Sensor-Effector Apparatus for Maintaining Redox Homeostasis
2018 Standout
The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest
2022 Standout
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
2018 Standout
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
2018 Standout
The DisGeNET knowledge platform for disease genomics: 2019 update
2019 Standout
IID 2018 update: context-specific physical protein–protein interactions in human, model organisms and domesticated species
2018
Predicting Protein–Protein Interactions from the Molecular to the Proteome Level
2016
GeneMANIA Prediction Server 2013 Update
2013
Internal Disequilibria and Phenotypic Diversification during Replication of Hepatitis C Virus in a Noncoevolving Cellular Environment
2017 StandoutNobel
The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets
2020 Standout
Chemical Glycoproteomics
2016 StandoutNobel
Works of Sabry Razick being referenced
iRefIndex: A consolidated protein interaction database with provenance
2008
Literature curation of protein interactions: measuring agreement across major public databases
2010
iRefWeb: interactive analysis of consolidated protein interaction data and their supporting evidence
2010
Navigating the Global Protein–Protein Interaction Landscape Using iRefWeb
2013