Citation Impact
Citing Papers
A synthetic Escherichia coli predator–prey ecosystem
2008 StandoutNobel
Spatially resolved, highly multiplexed RNA profiling in single cells
2015 StandoutScience
Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq
2015 StandoutScience
Biogenesis of Influenza A Virus Hemagglutinin Cross-Protective Stem Epitopes
2014 StandoutNobel
DoubletFinder: Doublet Detection in Single-Cell RNA Sequencing Data Using Artificial Nearest Neighbors
2019 Standout
A survey of best practices for RNA-seq data analysis
2016 Standout
Cycling Transcriptional Networks Optimize Energy Utilization on a Genome Scale
2015
Enhancer Histone Acetylation Modulates Transcriptional Bursting Dynamics of Neuronal Activity-Inducible Genes
2019
dCas9 fusion to computer-designed PRC2 inhibitor reveals functional TATA box in distal promoter region
2022 StandoutNobel
DNA methylation and epigenetic inheritance
1990 Standout
Biomolecular condensates: organizers of cellular biochemistry
2017 Standout
Regulation of microRNA function in animals
2018 Standout
Transcriptional architecture of the mammalian circadian clock
2016 Standout
Applying high-dimensional single-cell technologies to the analysis of cancer immunotherapy
2020
Viral genome imaging of hepatitis C virus to probe heterogeneous viral infection and responses to antiviral therapies
2016 StandoutNobel
Modular and tunable biological feedback control using a de novo protein switch
2019 StandoutNatureNobel
Regulation of microRNA biogenesis
2014 Standout
Nature, Nurture, or Chance: Stochastic Gene Expression and Its Consequences
2008 Standout
N6-methyladenosine Modulates Messenger RNA Translation Efficiency
2015 Standout
Noise Propagation and Signaling Sensitivity in Biological Networks: A Role for Positive Feedback
2008
Directed evolution: new parts and optimized function
2009 StandoutNobel
Metabolic Regulation of Hematopoietic Stem Cells in the Hypoxic Niche
2011 StandoutNobel
Network motifs: theory and experimental approaches
2007 Standout
Transcriptional control of HIV latency: Cellular signaling pathways, epigenetics, happenstance and the hope for a cure
2014
Potential landscape of high dimensional nonlinear stochastic dynamics with large noise
2017
Origins of regulated cell-to-cell variability
2011
SCENIC: single-cell regulatory network inference and clustering
2017 Standout
The ecology and biotechnology of sulphate-reducing bacteria
2008 Standout
Clk post-transcriptional control denoises circadian transcription both temporally and spatially
2015 StandoutNobel
Selective Degradation of Host MicroRNAs by an Intergenic HCMV Noncoding RNA Accelerates Virus Production
2013
Engineering an allosteric transcription factor to respond to new ligands
2015 StandoutNobel
The Mechanisms behind the Therapeutic Activity of BET Bromodomain Inhibition
2014
Cellular Decision Making and Biological Noise: From Microbes to Mammals
2011
Cellular senescence in ageing: from mechanisms to therapeutic opportunities
2020 Standout
Systems biology of stem cell fate and cellular reprogramming
2009
Regulatory Dynamics of Synthetic Gene Networks with Positive Feedback
2006
Metazoan MicroRNAs
2018 Standout
Biofilms: an emergent form of bacterial life
2016 Standout
Quantitative single-cell RNA-seq with unique molecular identifiers
2013
Next-generation synthetic gene networks
2009
An efficient and sensitive method for preparing cDNA libraries from scarce biological samples
2014 StandoutNobel
Nanog-dependent feedback loops regulate murine embryonic stem cell heterogeneity
2012
A Broad RNA Virus Survey Reveals Both miRNA Dependence and Functional Sequestration
2016 StandoutNobel
On the Dependency of Cellular Protein Levels on mRNA Abundance
2016 Standout
MAST: a flexible statistical framework for assessing transcriptional changes and characterizing heterogeneity in single-cell RNA sequencing data
2015 Standout
Variability and memory of protein levels in human cells
2006 Nature
Simultaneous epitope and transcriptome measurement in single cells
2017 Standout
Where, When, and How: Context-Dependent Functions of RNA Methylation Writers, Readers, and Erasers
2019 Standout
The evolving tumor microenvironment: From cancer initiation to metastatic outgrowth
2023 Standout
Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets
2015 Standout
General properties of transcriptional time series in Escherichia coli
2011
Nuclear Retention of mRNA in Mammalian Tissues
2015
Droplet Barcoding for Single-Cell Transcriptomics Applied to Embryonic Stem Cells
2015 Standout
Multiplexed, targeted profiling of single-cell proteomes and transcriptomes in a single reaction
2016
Reading, writing and erasing mRNA methylation
2019 Standout
mRNA-targeted fluorescent in situ hybridization (FISH) of Gram-negative bacteria without template amplification or tyramide signal amplification
2007
Endogenous microRNA sponges: evidence and controversy
2016 Standout
From single-cell to cell-pool transcriptomes: Stochasticity in gene expression and RNA splicing
2013
Cystine transporter SLC7A11/xCT in cancer: ferroptosis, nutrient dependency, and cancer therapy
2020 Standout
Hepatitis C Virus RNA Functionally Sequesters miR-122
2015 StandoutNobel
Neutralizing Antibodies Against Previously Encountered Influenza Virus Strains Increase over Time: A Longitudinal Analysis
2013
Biology by design: reduction and synthesis of cellular components and behaviour
2007
Reversed graph embedding resolves complex single-cell trajectories
2017 Standout
Exosomes
2019 Standout
Noise in transcription negative feedback loops: simulation and experimental analysis
2006
Viral–Host Interactions That Control HIV-1 Transcriptional Elongation
2013
Interplay of physical mechanisms and biofilm processes: review of microfluidic methods
2014
Colored extrinsic fluctuations and stochastic gene expression
2008
Genetic Determinants and Cellular Constraints in Noisy Gene Expression
2013 Science
BET Proteins as Targets for Anticancer Treatment
2017
Engineering microbial consortia: a new frontier in synthetic biology
2008 StandoutNobel
Control theory meets synthetic biology
2016
Insights into HIV-1 proviral transcription from integrative structure and dynamics of the Tat:AFF4:P-TEFb:TAR complex
2016 StandoutNobel
Functional roles for noise in genetic circuits
2010 Nature
Single Mammalian Cells Compensate for Differences in Cellular Volume and DNA Copy Number through Independent Global Transcriptional Mechanisms
2015
Works of Roy D. Dar being referenced
Screening for noise in gene expression identifies drug synergies
2014 Science
Dynamics of protein noise can distinguish between alternate sources of gene‐expression variability
2012
Transient-mediated fate determination in a transcriptional circuit of HIV
2008
Gene network shaping of inherent noise spectra
2006 Nature
An Endogenous Accelerator for Viral Gene Expression Confers a Fitness Advantage
2012
Noise in biological circuits
2009
BET bromodomain-targeting compounds reactivate HIV from latency via a Tat-independent mechanism
2013
Transcriptional burst frequency and burst size are equally modulated across the human genome
2012
Using noise to probe and characterize gene circuits
2008
Frequency domain analysis of noise in simple gene circuits
2006