Citation Impact
Citing Papers
NCBI Taxonomy: a comprehensive update on curation, resources and tools
2020 Standout
Resolution of ray-finned fish phylogeny and timing of diversification
2012 Standout
Visualizing differences in phylogenetic information content of alignments and distinction of three classes of long-branch effects
2007
Comparative mitogenomics of Braconidae (Insecta: Hymenoptera) and the phylogenetic utility of mitochondrial genomes with special reference to Holometabolous insects
2010
Annelid phylogeny and the status of Sipuncula and Echiura
2007 Standout
A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes
2013 Standout
Animal mitochondrial genomes
1999 Standout
The biogeography of mitochondrial and nuclear discordance in animals
2012 Standout
Honey, Propolis, and Royal Jelly: A Comprehensive Review of Their Biological Actions and Health Benefits
2017 Standout
Species status and phylogeography of two closely related Coptolabrus species (Coleoptera: Carabidae) in South Korea inferred from mitochondrial and nuclear gene sequences
2005
Patterns of evolution of mitochondrial cytochrome c oxidase I and II DNA and implications for DNA barcoding
2006
The Complex Evolutionary History of Gorillas: Insights from Genomic Data
2006 StandoutNobel
Accurate and efficient reconstruction of deep phylogenies from structured RNAs
2009
GSTand its relatives do not measure differentiation
2008 Standout
Population structure within and between subspecies of the Mediterranean triplefin fish Tripterygion delaisi revealed by highly polymorphic microsatellite loci
2006
Phylogenetics of Australian Acacia thrips: the evolution of behaviour and ecology
2002
ViennaRNA Package 2.0
2011 Standout
A multi-gene phylogeny of Clavicipitaceae (Ascomycota, Fungi): Identification of localized incongruence using a combinational bootstrap approach
2007 Standout
Phylogenetic classification of bony fishes
2017
Two novel gene orders and the role of light-strand replication in rearrangement of the vertebrate mitochondrial genome
1997
The Mitochondrial Genome of the Screamer Louse Bothriometopus (Phthiraptera: Ischnocera): Effects of Extensive Gene Rearrangements on the Evolution of the Genome
2007
EVIDENCE FOR HISTORICAL INTROGRESSION ALONG A CONTACT ZONE BETWEEN TWO SPECIES OF CHAR (PISCES: SALMONIDAE) IN NORTHWESTERN NORTH AMERICA
2002
Phylogenetics of the Lizard Genus Tropidurus (Squamata: Tropiduridae: Tropidurinae): Direct Optimization, Descriptive Efficiency, and Sensitivity Analysis of Congruence Between Molecular Data and Morphology
2001
MITOS: Improved de novo metazoan mitochondrial genome annotation
2012 Standout
Systematics and evolution of ticks with a list of valid genus and species names
2004
Lophotrochozoan phylogeny assessed with LSU and SSU data: Evidence of lophophorate polyphyly
2006
Relative character-state space, amount of potential phylogenetic information, and heterogeneity of nucleotide and amino acid characters
2004
The incomplete natural history of mitochondria
2003 Standout
Reconstruction of the vertebrate ancestral genome reveals dynamic genome reorganization in early vertebrates
2007 Standout
A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing
2015 StandoutNature
The Value of Idiosyncratic Markers and Changes to Conserved tRNA Sequences from the Mitochondrial Genome of Hard Ticks (Acari: Ixodida: Ixodidae) for Phylogenetic Inference
2003
Comparative Population Genomics of the Ejaculate in Humans and the Great Apes
2013 StandoutNobel
Dispersal and gene flow in free-living marine nematodes
2013
Big trees from little genomes: mitochondrial gene order as a phylogenetic tool
1998 Standout
A Molecular Phylogeny of Hemiptera Inferred from Mitochondrial Genome Sequences
2012
Functional characterization of the Bcl-2 gene family in the zebrafish
2006
Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data
2012 Standout
Two Circular Chromosomes of Unequal Copy Number Make Up the Mitochondrial Genome of the Rotifer Brachionus plicatilis
2008
Revisiting the Insect Mitochondrial Molecular Clock: The Mid-Aegean Trench Calibration
2010 Standout
Introgressive hybridization between two Iberian endemic cyprinid fish: a comparison between two independent hybrid zones
2010
Sequence and organization of the mitochondrial genome of the Chagas disease vector, Triatoma dimidiata
2001
The Evolutionary History of the Coral Genus Acropora (Scleractinia, Cnidaria) Based on a Mitochondrial and a Nuclear Marker: Reticulation, Incomplete Lineage Sorting, or Morphological Convergence?
2001
Using nuclear haplotypes with microsatellites to study gene flow between recently separated Cichlid species
2003
The BCL-2 protein family: opposing activities that mediate cell death
2007 Standout
The merging of community ecology and phylogenetic biology
2009 Standout
Genetic aspects of mitochondrial genome evolution
2012
SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information
2010 Standout
Assessing the root of bilaterian animals with scalable phylogenomic methods
2009 Standout
A mitochondrial genome phylogeny of Diptera: whole genome sequence data accurately resolve relationships over broad timescales with high precision
2006 Standout
Multiple Data Sets, High Homoplasy, and the Phylogeny of Softshell Turtles (Testudines: Trionychidae)
2004
THE AMPHIBIAN TREE OF LIFE
2006 Standout
Insect mitochondrial control region: A review of its structure, evolution and usefulness in evolutionary studies
1997 Standout
Does Nonneutral Evolution Shape Observed Patterns of DNA Variation in Animal Mitochondrial Genomes?
2001
The mitochondrial genome of spotted green pufferfish Tetraodon nigroviridis (Teleostei: Tetraodontiformes) and divergence time estimation among model organisms in fishes
2006
Higher and lower-level relationships of the deep-sea fish order Alepocephaliformes (Teleostei: Otocephala) inferred from whole mitogenome sequences
2009
Geographical extent of Arctic char (Salvelinus alpinus) mtDNA introgression in brook char populations (S. fontinalis) from eastern Québec, Canada
1998
Phylogenetic analysis of Themira (Sepsidae: Diptera): sensitivity analysis, alignment, and indel treatment in a multigene study
2005
Picante: R tools for integrating phylogenies and ecology
2010 Standout
Multilocus Methods for Estimating Population Sizes, Migration Rates and Divergence Time, With Applications to the Divergence of Drosophila pseudoobscura and D. persimilis
2004 Standout
The adaptive significance of insect gall morphology
2003 Standout
SYSTEMATIC REVIEW OF THE FROG FAMILY HYLIDAE, WITH SPECIAL REFERENCE TO HYLINAE: PHYLOGENETIC ANALYSIS AND TAXONOMIC REVISION
2005 Standout
Extensive Introgression of Mitochondrial DNA Found between two Genetically Divergent Forms of Threespine Stickleback, Gasterosteus Aculeatus, around Japan
2001
Quantifying community assembly processes and identifying features that impose them
2013 Standout
Differentiating between Hypotheses of Lineage Sorting and Introgression in New Zealand Alpine Cicadas (Maoricicada Dugdale)
2006
EVIDENCE FOR HISTORICAL INTROGRESSION ALONG A CONTACT ZONE BETWEEN TWO SPECIES OF CHAR (PISCES: SALMONIDAE) IN NORTHWESTERN NORTH AMERICA
2002
Estimating Species Phylogeny from Gene-Tree Probabilities Despite Incomplete Lineage Sorting: An Example from Melanoplus Grasshoppers
2007 Standout
A comparison of a discovery‐based and an event‐based method of historical biogeography
2001
Phylogenetic signal and the utility of 12S and 16S mtDNA in frog phylogeny
2008
Total Evidence, Sequence Alignment, Evolution of Polychrotid Lizards, and a Reclassification of the Iguania (Squamata: Iguania)
2001
Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny
2013 Standout
Identifying spiders through DNA barcodes
2005 Standout
Species-Level Paraphyly and Polyphyly: Frequency, Causes, and Consequences, with Insights from Animal Mitochondrial DNA
2003 Standout
Stochastic Community Assembly: Does It Matter in Microbial Ecology?
2017 Standout
Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species
2003 Standout
Defaunation in the Anthropocene
2014 StandoutScience
Phylogeny in cryptic weevils: molecules, morphology and new genera of western Palaearctic Cryptorhynchinae (Coleoptera : Curculionidae)
2008 Standout
Update on Tick-Borne Rickettsioses around the World: a Geographic Approach
2013 Standout
Generation times in wild chimpanzees and gorillas suggest earlier divergence times in great ape and human evolution
2012 StandoutNobel
The world‐wide ‘fast–slow’ plant economics spectrum: a traits manifesto
2014 Standout
Estimating F-Statistics
2002
Phylogenies and Community Ecology
2002 Standout
Works of Richard E. Broughton being referenced
First Sequenced Mitochondrial Genome from the Phylum Acanthocephala(Leptorhynchoides thecatus) and Its Phylogenetic Position Within Metazoa
2005
Spatial Covariation of Mutation and Nonsynonymous Substitution Rates in Vertebrate Mitochondrial Genomes
2006
Quantification of Homoplasy for Nucleotide Transitions and Transversions and a Reexamination of Assumptions in Weighted Phylogenetic Analysis
2000
Evolutionary dynamics of tandem repeats in the mitochondrial DNA control region of the minnow Cyprinella spiloptera
1997
Diversification on an ecologically constrained adaptive landscape
2008
The Complete Sequence of the Zebrafish (Danio rerio) Mitochondrial Genome and Evolutionary Patterns in Vertebrate Mitochondrial DNA
2001
Length variation in mitochondrial DNA of the minnow Cyprinella spiloptera.
1994
Why weight?
2007
SIGNIFICANT ROLE FOR HISTORICAL EFFECTS IN THE EVOLUTION OF REPRODUCTIVE ISOLATION: EVIDENCE FROM PATTERNS OF INTROGRESSION BETWEEN THE CYPRINID FISHES,LUXILUS CORNUTUSANDLUXILUS CHRYSOCEPHALUS
1997
Variable microsatellite markers amplify across divergent lineages of cyprinid fishes (subfamily Leusicinae)
2004
10.1016/s0967-0653(98)83870-2
2000
Significant Role for Historical Effects in the Evolution of Reproductive Isolation: Evidence from Patterns of Introgression Between the Cyprinid Fishes, Luxilus cornutus and Luxilus chrysocephalus
1997
Nuclear Gene Genealogies Reveal Historical, Demographic and Selective Factors Associated With Speciation in Field Crickets
2003
Multi-locus phylogenetic analysis reveals the pattern and tempo of bony fish evolution
2013
Microsatellite variation suggests substantial gene flow between king mackerel (Scomberomorus cavalla) in the western Atlantic Ocean and Gulf of Mexico
2002