Citation Impact
Citing Papers
Histone demethylase KDM6A directly senses oxygen to control chromatin and cell fate
2019 StandoutScienceNobel
2017
Mesenchymal Cancer Cell-Stroma Crosstalk Promotes Niche Activation, Epithelial Reversion, and Metastatic Colonization
2015
A survey of best practices for RNA-seq data analysis
2016 Standout
The EGLN-HIF O 2 -Sensing System: Multiple Inputs and Feedbacks
2017 StandoutNobel
The promise and challenge of therapeutic genome editing
2020 StandoutNatureNobel
The molecular hallmarks of epigenetic control
2016 Standout
Functional Genetic Variants Revealed by Massively Parallel Precise Genome Editing
2018
Single-cell-resolution transcriptome map of human, chimpanzee, bonobo, and macaque brains
2020 StandoutNobel
Inflammation and Cancer: Triggers, Mechanisms, and Consequences
2019 Standout
Epithelial–Mesenchymal Transitions
2015
Epithelial–mesenchymal transition (EMT) and metastasis: yes, no, maybe?
2016
The SIN3A histone deacetylase complex is required for a complete transcriptional response to hypoxia
2017 StandoutNobel
Contextual determinants of TGFβ action in development, immunity and cancer
2018
iRegulon: From a Gene List to a Gene Regulatory Network Using Large Motif and Track Collections
2014
Transforming Growth Factor-β Signaling in Immunity and Cancer
2019 Standout
The multidimensional mechanisms of long noncoding RNA function
2017 Standout
TGF-β: the master regulator of fibrosis
2016 Standout
Histone Demethylase RBP2 Is Critical for Breast Cancer Progression and Metastasis
2014
Ferroptosis turns 10: Emerging mechanisms, physiological functions, and therapeutic applications
2022 Standout
Basset: learning the regulatory code of the accessible genome with deep convolutional neural networks
2016
Effective gene expression prediction from sequence by integrating long-range interactions
2021 StandoutNobel
The biology and function of fibroblasts in cancer
2016 Standout
Non-redundant functions of EMT transcription factors
2018
SCENIC: single-cell regulatory network inference and clustering
2017 Standout
Functional Classification and Experimental Dissection of Long Noncoding RNAs
2018 Standout
EMT Transition States during Tumor Progression and Metastasis
2018 Standout
The Human Transcription Factors
2018 Standout
New insights into the mechanisms of epithelial–mesenchymal transition and implications for cancer
2018 Standout
Fast, scalable prediction of deleterious noncoding variants from functional and population genomic data
2017
Cancer stem cells revisited
2017 Standout
Recovering Gene Interactions from Single-Cell Data Using Data Diffusion
2018
The relevance of EMT in breast cancer metastasis: Correlation or causality?
2015
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy
2019 Standout
Tumor metastasis: moving new biological insights into the clinic
2013
YAP and TAZ: a nexus for Hippo signaling and beyond
2015
High-performance medicine: the convergence of human and artificial intelligence
2018 Standout
Competition between DNA methylation and transcription factors determines binding of NRF1
2015 Nature
The EMT-activator Zeb1 is a key factor for cell plasticity and promotes metastasis in pancreatic cancer
2017
MicroRNA biogenesis pathways in cancer
2015 Standout
U1 snRNP regulates cancer cell migration and invasion in vitro
2020 Standout
Emerging Biological Principles of Metastasis
2017 Standout
MicroRNA therapeutics: towards a new era for the management of cancer and other diseases
2017 Standout
The evolving tumor microenvironment: From cancer initiation to metastatic outgrowth
2023 Standout
EMT: 2016
2016 Standout
Oxidative Stress in Cancer
2020 Standout
Understanding gene regulatory mechanisms by integrating ChIP-seq and RNA-seq data: statistical solutions to biological problems
2014
Macrophages as regulators of tumour immunity and immunotherapy
2019 Standout
Unique features of long non-coding RNA biogenesis and function
2015 Standout
Tumour-associated macrophages as treatment targets in oncology
2017 Standout
Single-Cell Transcriptomic Analysis of Primary and Metastatic Tumor Ecosystems in Head and Neck Cancer
2017 Standout
Targeting ferroptosis as a vulnerability in cancer
2022 Standout
TGF-β Tumor Suppression through a Lethal EMT
2016
Hypoxia promotes stem cell phenotypes and poor prognosis through epigenetic regulation of DICER
2014
Ferroptosis: mechanisms, biology and role in disease
2021 Standout
Epigenetic repression of Krüppel-like factor 4 through Dnmt1 contributes to EMT in renal fibrosis
2015
Transcriptional regulation by Polycomb group proteins
2013
Mammalian SWI/SNF continuously restores local accessibility to chromatin
2021
Comprehensive Integration of Single-Cell Data
2019 Standout
hnRNPK Recruits PCGF3/5-PRC1 to the Xist RNA B-Repeat to Establish Polycomb-Mediated Chromosomal Silencing
2017
ATAC-see reveals the accessible genome by transposase-mediated imaging and sequencing
2016 StandoutNobel
Gene regulation by long non-coding RNAs and its biological functions
2020 Standout
Genome Architecture: Domain Organization of Interphase Chromosomes
2013
Genome-Based Taxonomic Classification of the Phylum Actinobacteria
2018 Standout
Autochthonous tumors driven by Rb1 loss have an ongoing requirement for the RBP2 histone demethylase
2018 StandoutNobel
CADD: predicting the deleteriousness of variants throughout the human genome
2018 Standout
GeneHancer: genome-wide integration of enhancers and target genes in GeneCards
2017
Epithelial Mesenchymal Transition in Tumor Metastasis
2018 Standout
Accurate transcriptome-wide prediction of microRNA targets and small interfering RNA off-targets with MIRZA-G
2015
Deep learning for healthcare: review, opportunities and challenges
2017 Standout
Predicting effective microRNA target sites in mammalian mRNAs
2015 Standout
Epigenetic control of thymic Treg‐cell development
2014 StandoutNobel
Epigenetic plasticity: A central regulator of epithelial-to-mesenchymal transition in cancer
2014
EMT, CSCs, and drug resistance: the mechanistic link and clinical implications
2017 Standout
Concise Review: Mesenchymal Stem/Multipotent Stromal Cells: The State of Transdifferentiation and Modes of Tissue Repair—Current Views
2007 Standout
oPOSSUM-3: Advanced Analysis of Regulatory Motif Over-Representation Across Genes or ChIP-Seq Datasets
2012
Means to an end: mechanisms of alternative polyadenylation of messenger RNA precursors
2013
Metabolic reprogramming and cancer progression
2020 StandoutScience
The tumor microenvironment underlies acquired resistance to CSF-1R inhibition in gliomas
2016 Science
PDGF Receptors in Tumor Biology: Prognostic and Predictive Potential
2014
Chemical Inhibition of ENL/AF9 YEATS Domains in Acute Leukemia
2021 StandoutNobel
Ferroptotic stress promotes the accumulation of pro-inflammatory proximal tubular cells in maladaptive renal repair
2021
Mechanisms of TGFβ-Induced Epithelial–Mesenchymal Transition
2016
An epigenetic profile of early T‐cell development from multipotent progenitors to committed T‐cell descendants
2013
Works of Phil Arnold being referenced
Tead2 expression levels control Yap/Taz subcellular distribution, zyxin expression, and epithelial-mesenchymal transition
2014
Klf4 Is a Transcriptional Regulator of Genes Critical for EMT, Including Jnk1 (Mapk8)
2013
Sox4 Is a Master Regulator of Epithelial-Mesenchymal Transition by Controlling Ezh2 Expression and Epigenetic Reprogramming
2013
Modeling of epigenome dynamics identifies transcription factors that mediate Polycomb targeting
2012
ISMARA: automated modeling of genomic signals as a democracy of regulatory motifs
2014
SwissRegulon, a database of genome-wide annotations of regulatory sites: recent updates
2012
Luteipulveratus halotolerans sp. nov., an actinobacterium (Dermacoccaceae) from forest soil
2015
MotEvo: integrated Bayesian probabilistic methods for inferring regulatory sites and motifs on multiple alignments of DNA sequences
2011