Standout Papers
Citation Impact
Citing Papers
Unpredictable Evolution in a 30-Year Study of Darwin's Finches
2002 Science
Functional Extinction of Birds Drives Rapid Evolutionary Changes in Seed Size
2013 StandoutScience
Limits of long-term selection against Neandertal introgression
2019 StandoutNobel
Major Ecological Transitions in Wild Sunflowers Facilitated by Hybridization
2003 StandoutScience
Sequencing and Analysis of Neanderthal Genomic DNA
2006 StandoutScienceNobel
Denisovan ancestry and population history of early East Asians
2020 StandoutScienceNobel
Maximum-Likelihood Estimation of Demographic Parameters Using the Frequency Spectrum of Unlinked Single-Nucleotide Polymorphisms
2004
One thousand plant transcriptomes and the phylogenomics of green plants
2019 StandoutNature
Strong mitochondrial DNA support for a Cretaceous origin of modern avian lineages
2008
A genetically explicit model of speciation by sensory drive within a continuous population in aquatic environments
2007
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
2011 Standout
How Malaria Has Affected the Human Genome and What Human Genetics Can Teach Us about Malaria
2005
USING EXPERIMENTAL EVOLUTION TO INVESTIGATE GEOGRAPHIC RANGE LIMITS IN MONKEYFLOWERS
2008
The global distribution of clinical episodes of Plasmodium falciparum malaria
2005 StandoutNature
The global diversity of birds in space and time
2012 StandoutNature
Inferring the History of Speciation from Multilocus DNA Sequence Data: The Case of Drosophila pseudoobscura and Close Relatives
2002
Learning about human population history from ancient and modern genomes
2011
NATURAL SELECTION AND INHERITANCE OF BREEDING TIME AND CLUTCH SIZE IN THE COLLARED FLYCATCHER
2003
Genetic variation in IL28B and spontaneous clearance of hepatitis C virus
2009 StandoutNature
The genome of the offspring of a Neanderthal mother and a Denisovan father
2018 StandoutNatureNobel
The Complex Evolutionary History of Gorillas: Insights from Genomic Data
2006 StandoutNobel
Generic Scan Using AFLP Markers as a Means to Assess the Role of Directional Selection in the Divergence of Sympatric Whitefish Ecotypes
2004
RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language
2016
Climate change and evolution: disentangling environmental and genetic responses
2007
FAST‐TRACK: Integrating QTL mapping and genome scans towards the characterization of candidate loci under parallel selection in the lake whitefish (Coregonus clupeaformis)
2004 Standout
Density-Dependent Cladogenesis in Birds
2008
The Effect of Gene Flow on the Coalescent Time in the Human-Chimpanzee Ancestral Population
2006
ALFRED: An allele frequency database for anthropology
2002
Simultaneously reconstructing viral cross-species transmission history and identifying the underlying constraints
2013
Disentangling interactions between adaptive divergence and gene flow when ecology drives diversification
2008
Complete nitrification by Nitrospira bacteria
2015 StandoutNature
The Human/Animal Interface: Emergence and Resurgence of Zoonotic Infectious Diseases
2007
DOES GENE FLOW CONSTRAIN ADAPTIVE DIVERGENCE OR VICE VERSA? A TEST USING ECOMORPHOLOGY AND SEXUAL ISOLATION IN TIMEMA CRISTINAE WALKING-STICKS
2004
CALIBRATING DIVERGENCE TIMES ON SPECIES TREES VERSUS GENE TREES: IMPLICATIONS FOR SPECIATION HISTORY OF APHELOCOMA JAYS
2010
The power and promise of population genomics: from genotyping to genome typing
2003
Speciation through sensory drive in cichlid fish
2008 StandoutNature
Using genetic evidence to evaluate four palaeoanthropological hypotheses for the timing of Neanderthal and modern human origins
2010
Bayesian Coalescent Inference of Past Population Dynamics from Molecular Sequences
2005 Standout
Bayesian random local clocks, or one rate to rule them all
2010
Genomics of the origin and evolution of Citrus
2018 StandoutNature
A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing
2015 StandoutNature
The global distribution and population at risk of malaria: past, present, and future
2004
Detecting the number of clusters of individuals using the software structure : a simulation study
2005 Standout
Climate change and evolutionary adaptation
2011 StandoutNature
Strategies to Protect Biological Diversity and the Evolutionary Processes That Sustain It
2002
Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data
2012 Standout
An early modern human from Romania with a recent Neanderthal ancestor
2015 StandoutNatureNobel
Coupled dynamics of body mass and population growth in response to environmental change
2010 Nature
BEAST 2: A Software Platform for Bayesian Evolutionary Analysis
2014 Standout
Integration of populations and differentiation of species
2003
Nuclear insertions help and hinder inference of the evolutionary history of gorilla mtDNA
2004
Identifying Signatures of Natural Selection in Tibetan and Andean Populations Using Dense Genome Scan Data
2010
Interrogating a High-Density SNP Map for Signatures of Natural Selection
2002
SNPs in ecological and conservation studies: a test in the Scandinavian wolf population
2005
Bayesian Phylogenetics with BEAUti and the BEAST 1.7
2012 Standout
New fossils from Jebel Irhoud, Morocco and the pan-African origin of Homo sapiens
2017 StandoutNature
The Population History of Extant and Extinct Hyenas
2005
Quantitative Trait Evolution and Environmental Change
2009
Inference of human population history from individual whole-genome sequences
2011 StandoutNature
EVOLUTIONARY POTENTIAL OF CHAMAECRISTA FASCICULATA IN RELATION TO CLIMATE CHANGE. I. CLINAL PATTERNS OF SELECTION ALONG AN ENVIRONMENTAL GRADIENT IN THE GREAT PLAINS
2004
Adaptation, extinction and global change
2008
Why is adaptation prevented at ecological margins? New insights from individual‐based simulations
2010
Oxygen Sensing, Homeostasis, and Disease
2011 StandoutNobel
Reconstructing Indian population history
2009 StandoutNature
Emerging fungal threats to animal, plant and ecosystem health
2012 StandoutNature
Adaptation, Plasticity, and Extinction in a Changing Environment: Towards a Predictive Theory
2010
The Human Condition—A Molecular Approach
2014 StandoutNobel
Analysis of one million base pairs of Neanderthal DNA
2006 StandoutNatureNobel
MrBayes 3: Bayesian phylogenetic inference under mixed models
2003 Standout
Analysis of 41 plant genomes supports a wave of successful genome duplications in association with the Cretaceous–Paleogene boundary
2014
HaploGrep 2: mitochondrial haplogroup classification in the era of high-throughput sequencing
2016
The origin of modern anatomy: By speciation or intraspecific evolution?
2008
Joint Inference of Microsatellite Mutation Models, Population History and Genealogies Using Transdimensional Markov Chain Monte Carlo
2011
Comparing Likelihood and Bayesian Coalescent Estimation of Population Parameters
2006
Unidirectional hybridization at a species’ range boundary: implications for habitat tracking
2009
Bayes Estimation of Species Divergence Times and Ancestral Population Sizes Using DNA Sequences From Multiple Loci
2003
Archaic human ancestry in East Asia
2011
DNA analysis of an early modern human from Tianyuan Cave, China
2013 StandoutNobel
Patterns of nucleotide misincorporations during enzymatic amplification and direct large-scale sequencing of ancient DNA
2006 StandoutNobel
Species Trees from Gene Trees: Reconstructing Bayesian Posterior Distributions of a Species Phylogeny Using Estimated Gene Tree Distributions
2007
Amazonia Through Time: Andean Uplift, Climate Change, Landscape Evolution, and Biodiversity
2010 StandoutScience
In the light of directed evolution: Pathways of adaptive protein evolution
2009 StandoutNobel
Distinguishing Migration From Isolation: A Markov Chain Monte Carlo Approach
2001
Separating endogenous ancient DNA from modern day contamination in a Siberian Neandertal
2014 StandoutNobel
Multilocus Methods for Estimating Population Sizes, Migration Rates and Divergence Time, With Applications to the Divergence of Drosophila pseudoobscura and D. persimilis
2004 Standout
Estimating Species Phylogenies Using Coalescence Times among Sequences
2009
Estimation of Admixture Proportions: A Likelihood-Based Approach Using Markov Chain Monte Carlo
2001
Excavating Neandertal and Denisovan DNA from the genomes of Melanesian individuals
2016 StandoutScienceNobel
Explosive Pleistocene diversification and hemispheric expansion of a “great speciator”
2009
Computational Molecular Evolution
2006 Standout
Pleistocene North African genomes link Near Eastern and sub-Saharan African human populations
2018 StandoutScienceNobel
Why did modern human populations disperse from Africa ca. 60,000 years ago? A new model
2006
Bayesian evolutionary model testing in the phylogenomics era: matching model complexity with computational efficiency
2013
Model Averaging and Bayes Factor Calculation of Relaxed Molecular Clocks in Bayesian Phylogenetics
2011
Prospects for nuclear gene phylogeography
2001
Reproductive isolation driven by the combined effects of ecological adaptation and reinforcement
2003
High-resolution species trees without concatenation
2007
The biodiversity of species and their rates of extinction, distribution, and protection
2014 StandoutScience
Higher-order phylogeny of modern birds (Theropoda, Aves: Neornithes) based on comparative anatomy. II. Analysis and discussion
2007
Bayesian Analysis of Genetic Differentiation Between Populations
2003
Gene trees and species trees are not the same
2001
MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
2012 Standout
Nuclear and mitochondrial DNA sequences from two Denisovan individuals
2015 StandoutNobel
The Origins of Plant Pathogens in Agro-Ecosystems
2008
Genetic legacy of state centralization in the Kuba Kingdom of the Democratic Republic of the Congo
2018 StandoutNobel
Bayesian Inference of Phylogeny and Its Impact on Evolutionary Biology
2001 StandoutScience
Meat consumption, health, and the environment
2018 StandoutScience
Speciation timing and neotropical biodiversity: the Tertiary–Quaternary debate in the light of molecular phylogenetic evidence
2008
A genetic analysis of the Gibraltar Neanderthals
2019 StandoutNobel
Estimating Mutation Parameters, Population History and Genealogy Simultaneously From Temporally Spaced Sequence Data
2002
Approximating the coalescent with recombination
2005
EXPERIMENTAL HYBRIDIZATION AS A TOOL FOR STUDYING SELECTION IN THE WILD
2003
Defaunation in the Anthropocene
2014 StandoutScience
Lack of phylogeography in European mammals before the last glaciation
2004 StandoutNobel
LAMARC 2.0: maximum likelihood and Bayesian estimation of population parameters
2006
A Phylogenomic Study of Birds Reveals Their Evolutionary History
2008 StandoutScience
Mitochondrial DNA phylogeography and population history of the grey wolfCanis lupus
1999
Directional selection is the primary cause of phenotypic diversification
2002
Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
2018 Standout
Bayesian Evolutionary Analysis with BEAST
2015
POPULATION GENOMICS : Genome-Wide Sampling of Insect Populations
2001
Generation times in wild chimpanzees and gorillas suggest earlier divergence times in great ape and human evolution
2012 StandoutNobel
The impossible coincidence. A single-species model for the origins of modern human behavior in Europe
2005
The frailty of adaptive hypotheses for the origins of organismal complexity
2007
Abundant Genetic Variation + Strong Selection = Multivariate Genetic Constraints: A Geometric View of Adaptation
2009
Ancient Admixture in Human History
2012 Standout
Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes
2005
Works of Peter Beerli being referenced
Effect of unsampled populations on the estimation of population sizes and migration rates between sampled populations
2004
Global Migration Dynamics Underlie Evolution and Persistence of Human Influenza A (H3N2)
2010
The Strength of Phenotypic Selection in Natural Populations
2001 Standout
PERSPECTIVE: GENE DIVERGENCE, POPULATION DIVERGENCE, AND THE VARIANCE IN COALESCENCE TIME IN PHYLOGEOGRAPHIC STUDIES
2000
The utility of single nucleotide polymorphisms in inferences of population history
2003
The Strength of Phenotypic Selection in Natural Populations
2001
Estimating Divergence Times from Molecular Data on Phylogenetic and Population Genetic Timescales
2002
BEAGLE: An Application Programming Interface and High-Performance Computing Library for Statistical Phylogenetics
2011
Strength and tempo of directional selection in the wild
2001
Comparison of Bayesian and maximum-likelihood inference of population genetic parameters
2005
Unified Framework to Evaluate Panmixia and Migration Direction Among Multiple Sampling Locations
2010
Usefulness of Single Nucleotide Polymorphism Data for Estimating Population Parameters
2000
When did Neanderthals and modern humans diverge?
2003
Early Origin and Recent Expansion of Plasmodium falciparum
2003 Science
Maximum likelihood estimation of a migration matrix and effective population sizes innsubpopulations by using a coalescent approach
2001 Standout
Maximum-Likelihood Estimation of Migration Rates and Effective Population Numbers in Two Populations Using a Coalescent Approach
1999