Citation Impact

Citing Papers

The biomass distribution on Earth
2018 Standout
Alteration of enzyme specificity by computational loop remodeling and design
2009 StandoutNobel
Mechanisms of Antibiotic Resistance in Escherichia coli Isolates Recovered from Wild Animals
2008
Effect of biochars pyrolyzed in N2 and CO2, and feedstock on microbial community in metal(loid)s contaminated soils
2019
Engineering precision nanoparticles for drug delivery
2020 Standout
Enhanced phytoremediation of mixed heavy metal (mercury)–organic pollutants (trichloroethylene) with transgenic alfalfa co-expressing glutathione S-transferase and human P450 2E1
2013
Messenger RNA-Based Vaccines Against Infectious Diseases
2020 StandoutNobel
Transgenic plants for phytoremediation of herbicides
2009
Environmental and health effects of the herbicide glyphosate
2017 Standout
Phytoremediation of heavy metals—Concepts and applications
2013 Standout
Increased Diels-Alderase activity through backbone remodeling guided by Foldit players
2012 StandoutNobel
Effects of the presence of sulfonamides in the environment and their influence on human health
2011 Standout
Computational redesign of a mononuclear zinc metalloenzyme for organophosphate hydrolysis
2012 StandoutNobel
Evolution of atrazine-degrading capabilities in the environment
2012
Plant–microbiome interactions: from community assembly to plant health
2020 Standout
The Arthrobacter arilaitensis Re117 Genome Sequence Reveals Its Genetic Adaptation to the Surface of Cheese
2010
Questioning our perceptions about evolution of biodegradative enzymes
2009
Evolution of efficient pathways for degradation of anthropogenic chemicals
2009
Antibiotics bioremediation: Perspectives on its ecotoxicity and resistance
2019 Standout
Highly efficient CD4+ T cell targeting and genetic recombination using engineered CD4+ cell-homing mRNA-LNPs
2021 StandoutNobel
Complete nitrification by Nitrospira bacteria
2015 StandoutNature
Computational Design of High-Affinity Epitope Scaffolds by Backbone Grafting of a Linear Epitope
2011 StandoutNobel
Expanding the Enzyme Universe: Accessing Non‐Natural Reactions by Mechanism‐Guided Directed Evolution
2015 StandoutNobel
The complex microbiota of raw milk
2013 Standout
Mechanism of tetracycline resistance by ribosomal protection protein Tet(O)
2013 StandoutNobel
Update on acquired tetracycline resistance genes
2005
Prediction of structures of zinc‐binding proteins through explicit modeling of metal coordination geometry
2010 StandoutNobel
Functional Metagenomics Reveals Previously Unrecognized Diversity of Antibiotic Resistance Genes in Gulls
2011
Soil amendments for immobilization of potentially toxic elements in contaminated soils: A critical review
2019 Standout
Environmental factors influencing the development and spread of antibiotic resistance
2017 Standout
Microbial modulators of soil carbon storage: integrating genomic and metabolic knowledge for global prediction
2013
Optimization of the In-Silico-Designed Kemp Eliminase KE70 by Computational Design and Directed Evolution
2011 StandoutNobel
The role of the natural environment in the emergence of antibiotic resistance in Gram-negative bacteria
2013 Standout
Hotspot-Centric De Novo Design of Protein Binders
2011 StandoutNobel
Improved Modeling of Side-Chain–Base Interactions and Plasticity in Protein–DNA Interface Design
2012 StandoutNobel
Call of the wild: antibiotic resistance genes in natural environments
2010 Standout
Transgenic plants for enhanced biodegradation and phytoremediation of organic xenobiotics
2009
Detection of antibiotic resistance and tetracycline resistance genes in Enterobacteriaceae isolated from the Pearl rivers in South China
2010
Review of antibiotic resistance in China and its environment
2017 Standout
Acetylcholinesterase Inhibitors: Pharmacology and Toxicology
2013 Standout
Influence of biochar and soil properties on soil and plant tissue concentrations of Cd and Pb: A meta-analysis
2020 Standout
Linkage between endosomal escape of LNP-mRNA and loading into EVs for transport to other cells
2019
Computational design of orthogonal nucleoside kinases
2010 StandoutNobel
Heavy use of prophylactic antibiotics in aquaculture: a growing problem for human and animal health and for the environment
2006 Standout
Directed enzyme evolution: climbing fitness peaks one amino acid at a time
2009 StandoutNobel
Challenges and opportunities in the phytoremediation of heavy metals contaminated soils: A review
2015 Standout
Human health risk assessment of antibiotic resistance associated with antibiotic residues in the environment: A review
2018 Standout
Scientific Benchmarks for Guiding Macromolecular Energy Function Improvement
2013 StandoutNobel
Assessing Potential Human Health Hazards and Benefits from Subtherapeutic Antibiotics in the United States: Tetracyclines as a Case Study
2010
Mining Endonuclease Cleavage Determinants in Genomic Sequence Data
2011 StandoutNobel
A Study in Molecular Contingency: Glutamine Phosphoribosylpyrophosphate Amidotransferase is a Promiscuous and Evolvable Phosphoribosylanthranilate Isomerase
2008
Target- and Resistance-Based Mechanistic Studies with TP-434, a Novel Fluorocycline Antibiotic
2012
Nanomaterial Delivery Systems for mRNA Vaccines
2021 StandoutNobel
Mechanisms of Antibiotic Resistance
2016 Standout
A comparison of technologies for remediation of heavy metal contaminated soils
2016 Standout
Soil enzymes in a changing environment: Current knowledge and future directions
2012 Standout
Bioremediation and Phytoremediation of Pesticides: Recent Advances
2009
A review of non‐equilibrium water flow and solute transport in soil macropores: principles, controlling factors and consequences for water quality
2007 Standout
High prevalence of antimicrobial-resistant genes and integrons in Escherichia coli isolates from Black-headed Gulls in the Czech Republic
2007
Phenotyping and Genotyping of Antibiotic-Resistant Escherichia coli Isolated from a Natural River Basin
2008
Complete Genome Sequence of Nitrosospira multiformis , an Ammonia-Oxidizing Bacterium from the Soil Environment
2008
Technology development for the production of biobased products from biorefinery carbohydrates—the US Department of Energy’s “Top 10” revisited
2010 Standout
Metabolite–Enzyme Coevolution: From Single Enzymes to Metabolic Pathways and Networks
2018
Comprehensive Evaluation of Antibiotics Emission and Fate in the River Basins of China: Source Analysis, Multimedia Modeling, and Linkage to Bacterial Resistance
2015 Standout
Enzyme Promiscuity: A Mechanistic and Evolutionary Perspective
2010 Standout
Antimicrobial Resistance in Escherichia coli Isolates from Swine and Wild Small Mammals in the Proximity of Swine Farms and in Natural Environments in Ontario, Canada
2008
Soil microbial community response to surfactants and herbicides in two soils
2013
Catalytic Improvement and Evolution of Atrazine Chlorohydrolase
2009
Fate of trace tetracycline with resistant bacteria and resistance genes in an improved AAO wastewater treatment plant
2014
Biodiversity and Litter Decomposition in Terrestrial Ecosystems
2005 Standout
Bioaugmentation of soils by increasing microbial richness: missing links
2001
Food Animals and Antimicrobials: Impacts on Human Health
2011 Standout
C 29 Olefinic Hydrocarbons Biosynthesized by Arthrobacter Species
2009
Life under extreme energy limitation: a synthesis of laboratory- and field-based investigations
2015
Catalytic reduction of nitrophenols and dyes using silver nanoparticles @ cellulose polymer paper for the resolution of waste water treatment challenges
2019 Standout
Combined Bioaugmentation and Biostimulation To Cleanup Soil Contaminated with High Concentrations of Atrazine
2003
Natural product and natural product derived drugs in clinical trials
2014 Standout
Tetracycline Resistance Genes and Tetracycline Resistant Lactose-Fermenting Enterobacteriaceae in Activated Sludge of Sewage Treatment Plants
2009
Sonochemistry:  Environmental Science and Engineering Applications
2001 Standout
Preferential Bromide and Pesticide Movement to Tile Drains under Different Cropping Practices
2002
Biodegradation of nitroaromatics and other nitrogen-containing xenobiotics
2004
Characterization of atrazine degradation and nitrate reduction by Pseudomonas sp. strain ADP
2000
Antimicrobial Resistance and Virulence Genes of Escherichia coli Isolates from Swine in Ontario
2005
RosettaRemodel: A Generalized Framework for Flexible Backbone Protein Design
2011 StandoutNobel
Computational design of a red fluorophore ligase for site-specific protein labeling in living cells
2014 StandoutNobel

Works of Nir Shapir being referenced

The potential of soil microorganisms to mineralize atrazine as predicted by MCH-PCR followed by nested PCR
2000
Secrets of Soil Survival Revealed by the Genome Sequence of Arthrobacter aurescens TC1
2006
Biodegradation of atrazine in transgenic plants expressing a modified bacterial atrazine chlorohydrolase (atzA) gene
2005
TrzN from Arthrobacter aurescens TC1 Is a Zinc Amidohydrolase
2006
Arthrobacter aurescens TC1 Atrazine Catabolism Genes trzN , atzB , and atzC Are Linked on a 160-Kilobase Region and Are Functional in Escherichia coli
2004
Novel psbA1 Gene from a Naturally Occurring Atrazine-Resistant Cyanobacterial Isolate
2002
Purification, Substrate Range, and Metal Center of AtzC: the N -Isopropylammelide Aminohydrolase Involved in Bacterial Atrazine Metabolism
2002
Frequency and Distribution of Tetracycline Resistance Genes in Genetically Diverse, Nonselected, and Nonclinical Escherichia coli Strains Isolated from Diverse Human and Animal Sources
2004
Purification and Characterization of TrzF: Biuret Hydrolysis by Allophanate Hydrolase Supports Growth
2006
Preclinical and Preliminary Clinical Evaluation of Genetically Transduced Dermal Tissue Implants for the Sustained Secretion of Erythropoietin and Interferon α
2015
Allophanate Hydrolase, Not Urease, Functions in Bacterial Cyanuric Acid Metabolism
2005
Atrazine Degradation in Subsurface Soil by Indigenous and Introduced Microorganisms
1997
Substrate Specificity and Colorimetric Assay for Recombinant TrzN Derived from Arthrobacter aurescens TC1
2005
Enzymatic Degradation of Chlorodiamino- s -Triazine
2002
On the Origins of Cyanuric Acid Hydrolase: Purification, Substrates, and Prevalence of AtzD from Pseudomonas sp. Strain ADP
2003
Rapid Atrazine Mineralization under Denitrifying Conditions by Pseudomonas sp. Strain ADP in Aquifer Sediments
1998
Purification and Characterization of Allophanate Hydrolase (AtzF) from Pseudomonas sp. Strain ADP
2005
Evolution of Catabolic Pathways: Genomic Insights into Microbial s -Triazine Metabolism
2006
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