Standout Papers

Easyfig: a genome comparison visualizer 2011 2026 2016 2021 2.6k
  1. Easyfig: a genome comparison visualizer (2011)
    Mitchell J. Sullivan, Nicola K. Petty et al. Bioinformatics

Citation Impact

Citing Papers

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Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation
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Origin of Antibiotics and Antibiotic Resistance, and Their Impacts on Drug Development: A Narrative Review
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Human Inborn Errors of Immunity: 2019 Update on the Classification from the International Union of Immunological Societies Expert Committee
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Staphylococcus sciuri bacteriophages double-convert for staphylokinase and phospholipase, mediate interspecies plasmid transduction, and package mecA gene
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Elucidation of quantitative structural diversity of remarkable rearrangement regions, shufflons, in IncI2 plasmids
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Discovery of archaeal fusexins homologous to eukaryotic HAP2/GCS1 gamete fusion proteins
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Protein interactions in human pathogens revealed through deep learning
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Exploring short k-mer profiles in cells and mobile elements from Archaea highlights the major influence of both the ecological niche and evolutionary history
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Massive expansion of human gut bacteriophage diversity
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Contribution of platelets to tumour metastasis
2011 Standout
Genomic Characterisation of Invasive Non-Typhoidal Salmonella enterica Subspecies enterica Serovar Bovismorbificans Isolates from Malawi
2013
Plant Species-Dependent Increased Abundance and Diversity of IncP-1 Plasmids in the Rhizosphere: New Insights Into Their Role and Ecology
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Characterization of plasmid pAX22, encoding VIM-1 metallo-β-lactamase, reveals a new putative mechanism of In70 integron mobilization
2013
Plasmids Carrying blaCMY -2/4 in Escherichia coli from Poultry, Poultry Meat, and Humans Belong to a Novel IncK Subgroup Designated IncK2
2017
Controlling and enhancing CRISPR systems
2020 StandoutNobel
Retrospective analysis of diabetic foot osteomyelitis management and outcome at a tertiary care hospital in the UK
2019
CRISPRTarget
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Skeletal infections: microbial pathogenesis, immunity and clinical management
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A jumbo phage that forms a nucleus-like structure evades CRISPR–Cas DNA targeting but is vulnerable to type III RNA-based immunity
2019
Genetic characterization of mcr-1 -bearing plasmids to depict molecular mechanisms underlying dissemination of the colistin resistance determinant
2016
Environmental factors influencing the development and spread of antibiotic resistance
2017 Standout
Differential contribution of AcrAB and OqxAB efflux pumps to multidrug resistance and virulence in Klebsiella pneumoniae
2014
Description of genomic islands associated to the multidrug-resistant Pseudomonas aeruginosa clone ST277
2016
Comparative analysis of the complete genome of KPC-2-producing Klebsiella pneumoniae Kp13 reveals remarkable genome plasticity and a wide repertoire of virulence and resistance mechanisms
2014
Antibiotic resistance in the environment
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Aminoglycoside Resistance
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A thermostable Cas9 with increased lifetime in human plasma
2017 StandoutNobel
The Complete Genome Sequence of Escherichia coli EC958: A High Quality Reference Sequence for the Globally Disseminated Multidrug Resistant E. coli O25b:H4-ST131 Clone
2014
Chemistry of Class 1 CRISPR-Cas effectors: Binding, editing, and regulation
2020 StandoutNobel
NCBI prokaryotic genome annotation pipeline
2016 Standout
metaSPAdes: a new versatile metagenomic assembler
2017 Standout
The final steps of integrin activation: the end game
2010
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads
2017 Standout
Human inborn errors of immunity to infection affecting cells other than leukocytes: from the immune system to the whole organism
2019
Towards a taxonomy of conjugative plasmids
2017
The microbial nitrogen-cycling network
2018 Standout
Mobile Genetic Elements Associated with Antimicrobial Resistance
2018 Standout
Molecular Characterization of the Multidrug Resistant Escherichia coli ST131 Clone
2015
Identification of IncA/C Plasmid Replication and Maintenance Genes and Development of a Plasmid Multilocus Sequence Typing Scheme
2016
Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
2018 Standout
Diversity and Global Distribution of IncL/M Plasmids Enabling Horizontal Dissemination ofβ-Lactam Resistance Genes among the Enterobacteriaceae
2015
Integrin αIIbβ3 outside-in signaling
2017
Klebsiella pneumoniae: Going on the Offense with a Strong Defense
2016 Standout
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
2014 Standout
Molecular Characterization of IMP-1-Producing Enterobacter cloacae Complex Isolates in Tokyo
2018
Single-cell genomics-based analysis of virus–host interactions in marine surface bacterioplankton
2015
Plasmid-Encoded TransferablemecB-Mediated Methicillin Resistance inStaphylococcus aureus
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Novel Type XII Staphylococcal Cassette Chromosome mec Harboring a New Cassette Chromosome Recombinase, CcrC2
2015
Global dissemination of a multidrug resistant Escherichia coli clone
2014
Genome Dynamics of Escherichia coli during Antibiotic Treatment: Transfer, Loss, and Persistence of Genetic Elements In situ of the Infant Gut
2017
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison
2015 Standout
Antimicrobial Resistance in ESKAPE Pathogens
2020 Standout
Bioinformatic Genome Comparisons for Taxonomic and Phylogenetic Assignments Using Aeromonas as a Test Case
2014

Works of Mitchell J. Sullivan being referenced

CIB1 deficiency results in impaired thrombosis: the potential role of CIB1 in outside‐in signaling through integrin αIIbβ3
2009
Easyfig: a genome comparison visualizer
2011 Standout
Genome Sequence of the Emerging Pathogen Aeromonas caviae
2010
Genetic Basis of Emerging Vancomycin, Linezolid, and Daptomycin Heteroresistance in a Case of Persistent Enterococcus faecium Bacteremia
2018
Rankless by CCL
2026