Citation Impact
Citing Papers
Direct observation of thymine dimer repair in DNA by photolyase
2005 StandoutNobel
Electrically monitoring DNA repair by photolyase
2005 StandoutNobel
Base-excision repair of oxidative DNA damage
2007 StandoutNature
Dissociative electron transfer to and from pyrimidine cyclobutane dimers: An electrochemical study
2004
Discovery of Riociguat (BAY 63‐2521): A Potent, Oral Stimulator of Soluble Guanylate Cyclase for the Treatment of Pulmonary Hypertension
2009
NMR studies of a DNA containing 8-hydroxydeoxyguanosine
1991
3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures
2008
A DNA-fuelled molecular machine made of DNA
2000 StandoutNature
Primer3—new capabilities and interfaces
2012 Standout
Instability and decay of the primary structure of DNA
1993 StandoutNatureNobel
Electrostatic Origin of the Catalytic Power of Enzymes and the Role of Preorganized Active Sites
1998 StandoutNobel
Oncogene-induced Nrf2 transcription promotes ROS detoxification and tumorigenesis
2011 StandoutNature
Recoupling of Heteronuclear Dipolar Interactions with Rotational-Echo Double-Resonance at High Magic-Angle Spinning Frequencies
2000
Computing vibrational spectra from ab initio molecular dynamics
2013
Local Polar Fluctuations in Lead Halide Perovskite Crystals
2017 StandoutNobel
The molecular origin of high DNA-repair efficiency by photolyase
2015 StandoutNobel
Development and testing of a general amber force field
2004 Standout
Studies of DNA dumbbells. I. Melting curves of 17 DNA dumbbells with different duplex stem sequences linked by T4 endloops: Evaluation of the nearest‐neighbor stacking interactions in DNA
1992
Mutational specificity of alkylating agents and the influence of DNA repair
1990
Dynamics and mechanism of repair of ultraviolet-induced (6–4) photoproduct by photolyase
2010 StandoutNatureNobel
Controlling the dynamics of molecular encapsulation and gating
2010
Design and self-assembly of two-dimensional DNA crystals
1998 StandoutNature
Mfold web server for nucleic acid folding and hybridization prediction
2003 Standout
Mutagenesis by 8-oxoguanine: an enemy within
1993
Accumulation of premutagenic DNA lesions in mice defective in removal of oxidative base damage
1999 StandoutNobel
Pushing the frontiers of density functionals by solving the fractional electron problem
2021 StandoutScienceNobel
Quantitative exploration of the molecular origin of the activation of GTPase
2013 StandoutNobel
Close agreement between the orientation dependence of hydrogen bonds observed in protein structures and quantum mechanical calculations
2004 StandoutNobel
p53 Mutations in Human Cancers
1991 StandoutScience
Energetics of the Catalytic Reaction of Ribonuclease A: A Computational Study of Alternative Mechanisms
1998 StandoutNobel
Stacking interactions: Ab initio SCF and MP2 study on (H2O)2, (H2S)2, (HCN)2, (CH2O)2 and (C2H4)2
1986
Transition structures for the interchange of hydrogen atoms within the water dimer
1990 StandoutNobel
The M06 suite of density functionals for main group thermochemistry, thermochemical kinetics, noncovalent interactions, excited states, and transition elements: two new functionals and systematic testing of four M06-class functionals and 12 other functionals
2007 Standout
Supramolecular Polymerization
2009 Standout
Escaping free-energy minima
2002 Standout
Organic Photoredox Catalysis
2016 Standout
Emergent Ion-Gated Binding of Cationic Host–Guest Complexes within Cationic M12L24 Molecular Flasks
2014 StandoutNobel
Molecular Reaction Dynamics
2005
Signaling Recognition Events with Fluorescent Sensors and Switches
1997 Standout
The ONIOM Method and Its Applications
2015
Pillar[5]arene as a Co-Factor in Templating Rotaxane Formation
2013 StandoutNobel
Electron-Transfer Induced Repair of 6-4 Photoproducts in DNA: A Computational Study
2007
Mapping of Functional Groups in Metal-Organic Frameworks
2013 StandoutScienceNobel
Tautomerism of Xanthine Oxidase Substrates Hypoxanthine and Allopurinol
1996
Attosecond physics
2009 StandoutNobel
Catalytic iron-carbene intermediate revealed in a cytochrome c carbene transferase
2018 StandoutNobel
The Mechanism of Ureido-Pyrimidinone:2,7-Diamido-Naphthyridine Complexation and the Presence of Kinetically Controlled Pathways in Multicomponent Hydrogen-Bonded Systems
2008
Photoreversible Transformation between Seconds and Hours Time-Scales: Threading of Pillar[5]arene onto the Azobenzene-End of a Viologen Derivative
2011
Binding of nucleosides, nucleotides and anionic planar substrates by bis-intercaland receptor molecules
1991
Apparent NAC Effect in Chorismate Mutase Reflects Electrostatic Transition State Stabilization
2003 StandoutNobel
Interaction between Thymine Dimer and Flavin−Adenine Dinucleotide: A DFT and Direct Ab Initio Molecular Dynamics Study
2008
Implicit Solvation Models: Equilibria, Structure, Spectra, and Dynamics
1999 Standout
Next Generation of Fluorine-Containing Pharmaceuticals, Compounds Currently in Phase II–III Clinical Trials of Major Pharmaceutical Companies: New Structural Trends and Therapeutic Areas
2016 Standout
Pyrolytic Depolymerization of Polyolefins Catalysed by Zirconium‐based UiO‐66 Metal–Organic Frameworks
2024 StandoutNobel
Involvement of Triplet Excited States and Olefin Radical Cations in Electron-Transfer Cycloreversion of Four-Membered Ring Compounds Photosensitized by (Thia)pyrylium Salts
2002
Application of the multimolecule and multiconformational RESP methodology to biopolymers: Charge derivation for DNA, RNA, and proteins
1995
Improved Nearest-Neighbor Parameters for Predicting DNA Duplex Stability
1996
Diels–Alder Reactions of Allene with Benzene and Butadiene: Concerted, Stepwise, and Ambimodal Transition States
2014
Clustering to identify RNA conformations constrained by secondary structure
2011 StandoutNobel
Free Energies of Chemical Reactions in Solution and in Enzymes with Ab Initio Quantum Mechanics/Molecular Mechanics Methods
2008
Modeling and design by hierarchical natural moves
2012 StandoutNobel
Thermodynamics of the Photoenzymic Repair Mechanism Studied by Density Functional Theory
2000
How Important Are Quantum Mechanical Nuclear Motions in Enzyme Catalysis?
1996 StandoutNobel
Electronic properties, hydrogen bonding, stacking, and cation binding of DNA and RNA bases
2001
Computational Studies of DNA Photolyase
2005
Quantum-Classical Molecular Dynamics Simulations of Proton Transfer Processes in Molecular Complexes and in Enzymes
1996
Effects of Intermolecular Hydrogen-Bonding Interactions on the Amide I Mode of N-Methylacetamide: Matrix-Isolation Infrared Studies and ab Initio Molecular Orbital Calculations
1998
Nonlinear optical response properties of molecules in condensed phases using the coupled cluster/dielectric continuum or molecular mechanics methods
2003
Electron Tunneling Pathways and Role of Adenine in Repair of Cyclobutane Pyrimidine Dimer by DNA Photolyase
2012 StandoutNobel
The ONIOM method: its foundation and applications to metalloenzymes and photobiology
2011
Performance of empirical potentials (AMBER, CFF95, CVFF, CHARMM, OPLS, POLTEV), semiempirical quantum chemical methods (AM1, MNDO/M, PM3), andab initio Hartree-Fock method for interaction of DNA bases: Comparison with nonempirical beyond Hartree-Fock results
1997
Computer Simulation Studies of the Catalytic Mechanism of Human Aldose Reductase
2000 StandoutNobel
Molecular cloning and functional expression of a human cDNA encoding the antimutator enzyme 8-hydroxyguanine-DNA glycosylase
1997 StandoutNobel
Origin of the Catalytic Power of Acetylcholinesterase: Computer Simulation Studies
1998 StandoutNobel
Structure, Energetics, and Dynamics of the Nucleic Acid Base Pairs: NonempiricalAb InitioCalculations
1999
Quantum Mechanical Continuum Solvation Models
2005 Standout
Theoretical Insight into Gate-Opening Adsorption Mechanism and Sigmoidal Adsorption Isotherm into Porous Coordination Polymer
2018 StandoutNobel
Activation-induced Deaminase (AID)-directed Hypermutation in the Immunoglobulin Sμ Region
2002 StandoutNobel
Ab Initio Study on the Structure and Splitting of the Uracil Dimer Anion Radical
1997
Dynamics and mechanism of cyclobutane pyrimidine dimer repair by DNA photolyase
2011 StandoutNobel
A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
1998 Standout
Density Functional Theory and Biomolecules: A Study of Glycine, Alanine, and Their Oligopeptides
1998
Binding of Pyrimidine Model Dimers to the Photolyase Enzyme: A Molecular Dynamics Study
1999
Insertion of specific bases during DNA synthesis past the oxidation-damaged base 8-oxodG
1991 StandoutNature
Structure optimization via free energy gradient method: Application to glycine zwitterion in aqueous solution
2000
Quantum mechanical computations on very large molecular systems: The local self‐consistent field method
1994
Structure and Function of DNA Photolyase and Cryptochrome Blue-Light Photoreceptors
2003 StandoutNobel
Works of Misako Aida being referenced
An ab initio molecular orbital study on the characteristics of 8-hydroxyguanine
1987
An insight into the environmental effects of the pocket of the active site of the enzyme. Ab initio ONIOM‐molecular dynamics (MD) study on cytosine deaminase
2007
An ab initio molecular orbital study on the sequence-dependency of DNA conformation: An evaluation of intra- and inter-strand stacking interaction energy
1988
An ab initio MO study on the thymine dimer and its radical cation
1996
A polarizable mixed Hamiltonian model of electronic structure for micro-solvated excited states. I. Energy and gradients formulation and application to formaldehyde (1A2)
2002
Free-Energy Maps of Base−Amino Acid Interactions for DNA−Protein Recognition
1999
Determination of the Three-Dimensional Structure of a New Crystalline Form of N-Acetyl-Pro-Gly-Phe As Revealed by 13C REDOR, X-Ray Diffraction, and Molecular Dynamics Calculation
1996
Ab initio molecular orbital study on the pairing and stacking interactions between nucleic acid bases in relation to the biological activities
1988
IR and Raman intensities in vibrational spectra from direct ab initio molecular dynamics: D2O as an illustration
2003
Dimerization and Double Proton Transfer-Induced Tautomerism of 4(3H)-Pyrimidinone in Solution Studied by IR Spectroscopy and Quantum Chemical Calculations
2006
Ab initio force field for simulations of proteins and nucleic acids
1992
A Theoretical Insight into the Interaction of Fatty Acids Involved in Royal Jelly with the Human Estrogen Receptor β
2008
Theoretical Studies on Hydrogen Bonding Interactions between Peptide Units
1993
Kinetic Investigations of the Process of Encapsulation of Small Hydrocarbons into a Cavitand−Porphyrin
2007
The ONIOM molecular dynamics method for biochemical applications: Cytidine deaminase
2007
ONIOM Study of the Mechanism of the Enzymatic Hydrolysis of Biodegradable Plastics
2009
Ab initio mo study on base stacking: Adenine-adenine interaction in single-stranded polyadenylic acid (Poly A)
1982
Ab Initio ONIOM−Molecular Dynamics (MD) Study on the Deamination Reaction by Cytidine Deaminase
2007
An ab initio molecular orbital study on the stacking interaction between nucleic acid bases: Dependence on the sequence and relation to the conformation
1986
Dynamics-Driven Reaction Pathway in an Intramolecular Rearrangement
2003 Science
Characteristics of the Watson‐Crick type hydrogen‐bonded DNA base pairs: An ab initio molecular orbital study
1988
Synthesis and properties of purinophanes. Relationship between the magnitude of hypochromism and stacking geometry of purine rings
1988
Critical assessment of the hybrid QM/MM-pol-vib approach: Small water clusters using polarizable flexible water potentials
2000
An ab Initio MO Study on Fragmentation Reaction Mechanism of Thymine Dimer Radical Cation
1997
Determination of the Three-Dimensional Structure of Crystalline Leu-Enkephalin Dihydrate Based on Six Sets of Accurately Determined Interatomic Distances from 13C-REDOR NMR and the Conformation-Dependent 13C Chemical Shifts
1998