Mark Fleharty

Crumble: reference free lossy compression of sequence quality values

A sex-biased imbalance between Tfr, Tph, and atypical B cells determines antibody responses in COVID-19 patients

Improved metagenomic analysis with Kraken 2

Human Stem Cell Resources Are an Inroad to Neandertal DNA Functions

Genetic effects on gene expression across human tissues

High-performance medicine: the convergence of human and artificial intelligence

An outbreak of severe Kawasaki-like disease at the Italian epicentre of the SARS-CoV-2 epidemic: an observational cohort study

Sensitive protein alignments at tree-of-life scale using DIAMOND

Considering how biological sex impacts immune responses and COVID-19 outcomes

Systematic comparative analysis of single-nucleotide variant detection methods from single-cell RNA sequencing data

Molecular Docking: A Powerful Approach for Structure-Based Drug Discovery

A universal SNP and small-indel variant caller using deep neural networks

Minimap2: pairwise alignment for nucleotide sequences

Twelve years of SAMtools and BCFtools

Local deformations of polymers with nonplanar rigid main-chain internal coordinates

Best practices for benchmarking germline small-variant calls in human genomes

Landscape of X chromosome inactivation across human tissues

A synthetic-diploid benchmark for accurate variant-calling evaluation

Simulations of protein folding