Citation Impact
Citing Papers
Why highly expressed proteins evolve slowly
2005 StandoutNobel
Structures of Cas9 Endonucleases Reveal RNA-Mediated Conformational Activation
2014 StandoutScienceNobel
Toward the structural genomics of complexes: Crystal structure of a PE/PPE protein complex from Mycobacterium tuberculosis
2006
Structures of a CRISPR-Cas9 R-loop complex primed for DNA cleavage
2016 StandoutScienceNobel
Programmable RNA recognition using a CRISPR-associated Argonaute
2018 StandoutNobel
Sequencing and Analysis of Neanderthal Genomic DNA
2006 StandoutScienceNobel
Protein structure determination using metagenome sequence data
2017 StandoutScienceNobel
A Programmable Dual-RNA–Guided DNA Endonuclease in Adaptive Bacterial Immunity
2012 StandoutScienceNobel
Genes linked by fusion events are generally of the same functional category: A systematic analysis of 30 microbial genomes
2001
MicroRNA Detection and Target Prediction: Integration of Computational and Experimental Approaches
2007
DNA interrogation by the CRISPR RNA-guided endonuclease Cas9
2014 StandoutNatureNobel
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
2000 StandoutNature
Gene context conservation of a higher order than operons
2000
SNAPper: gene order predicts gene function
2002
Modularity in the gain and loss of genes: applications for function prediction
2001
Coenzyme A Biosynthesis: Reconstruction of the Pathway in Archaea and an Evolutionary Scenario Based on Comparative Genomics
2004
Who's your neighbor? New computational approaches for functional genomics
2000
miRU: an automated plant miRNA target prediction server
2005
MicroRNAs
2004 Standout
A DNA repair system specific for thermophilic Archaea and bacteria predicted by genomic context analysis
2002
Protein function in the post-genomic era
2000 Nature
Cytoscape: A Software Environment for Integrated Models of Biomolecular Interaction Networks
2003 Standout
Computational genetics: finding protein function by nonhomology methods
2000
Programmable RNA Tracking in Live Cells with CRISPR/Cas9
2016 StandoutNobel
New CRISPR–Cas systems from uncultivated microbes
2016 StandoutNatureNobel
Apparent dependence of protein evolutionary rate on number of interactions is linked to biases in protein–protein interactions data sets
2003
Missing genes in metabolic pathways: a comparative genomics approach
2003
Predictome: a database of putative functional links between proteins
2002
Automatic detection of subsystem/pathway variants in genome analysis
2005
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
2011 StandoutNatureNobel
Comparative Genomics of Thiamin Biosynthesis in Procaryotes
2002
MicroRNAs: Target Recognition and Regulatory Functions
2009 Standout
Function prediction and protein networks
2003
Computational analysis of miRNA targets in plants: current status and challenges
2010
Protein interaction maps for complete genomes based on gene fusion events
1999 Nature
Prediction of Plant MicroRNA Targets
2002 Standout
Inhibiting Bacterial Fatty Acid Synthesis
2006
The Subsystems Approach to Genome Annotation and its Use in the Project to Annotate 1000 Genomes
2005 Standout
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)
2013 Standout
IMG: the integrated microbial genomes database and comparative analysis system
2011
Crystal structure of the β2 adrenergic receptor–Gs protein complex
2011 StandoutNatureNobel
Programmable RNA recognition and cleavage by CRISPR/Cas9
2014 StandoutNatureNobel
Serum response factor regulates a muscle-specific microRNA that targets Hand2 during cardiogenesis
2005 Nature
The MicroRNA miR-1 Regulates a MEF-2-Dependent Retrograde Signal at Neuromuscular Junctions
2008 StandoutNobel
RNA-guided genetic silencing systems in bacteria and archaea
2012 StandoutNatureNobel
Diet rapidly and reproducibly alters the human gut microbiome
2013 StandoutNature
Guilt by Association: Contextual Information in Genome Analysis: Figure 1.
2000
MicroRNAs and Other Tiny Endogenous RNAs in C. elegans
2003 StandoutNobel
From words to literature in structural proteomics
2003 Nature
psRNATarget: a plant small RNA target analysis server
2011 Standout
Conservation of DNA Regulatory Motifs and Discovery of New Motifs in Microbial Genomes
2000
STRING: a web-server to retrieve and display the repeatedly occurring neighbourhood of a gene
2000
Quantitative reactivity profiling predicts functional cysteines in proteomes
2010 StandoutNatureNobel
Functional Proteomics Reveals the Biochemical Niche of C. elegans DCR-1 in Multiple Small-RNA-Mediated Pathways
2006 StandoutNobel
Comparative analysis of regulatory patterns in bacterial genomes
2000
Functional and structural genomics using PEDANT
2001
Predicting Protein Function by Genomic Context: Quantitative Evaluation and Qualitative Inferences
2000
Comparative assessment of large-scale data sets of protein–protein interactions
2002 StandoutNature
Characterization of a New Pantothenate Kinase Isoform from Helicobacter pylori
2005
CRISPR-Mediated Modular RNA-Guided Regulation of Transcription in Eukaryotes
2013 StandoutNobel
A combined algorithm for genome-wide prediction of protein function
1999 Nature
CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats
2007 Standout
Conservation of the Biotin Regulon and the BirA Regulatory Signal in Eubacteria and Archaea
2002
The Crystal Structure of Yeast Fatty Acid Synthase, a Cellular Machine with Eight Active Sites Working Together
2007 StandoutNobel
The functions of animal microRNAs
2004 StandoutNatureNobel
Exploitation of gene context
2000
Repurposing CRISPR as an RNA-Guided Platform for Sequence-Specific Control of Gene Expression
2013 StandoutNobel
A Cas9–guide RNA complex preorganized for target DNA recognition
2015 StandoutScienceNobel
Role of MicroRNAs in Plant and Animal Development
2003 StandoutScienceNobel
Systematic discovery of natural CRISPR-Cas12a inhibitors
2018 StandoutScienceNobel
Structures of the CRISPR-Cmr complex reveal mode of RNA target positioning
2015 StandoutScienceNobel
The new frontier of genome engineering with CRISPR-Cas9
2014 StandoutScienceNobel
Genome Properties: a system for the investigation of prokaryotic genetic content for microbiology, genome annotation and comparative genomics
2004
STRING: a database of predicted functional associations between proteins
2003 Standout
A Bioinformatician's Guide to Metagenomics
2008
CRISPR-CasΦ from huge phages is a hypercompact genome editor
2020 StandoutScienceNobel
CasA mediates Cas3-catalyzed target degradation during CRISPR RNA-guided interference
2014 StandoutNobel
Programmed DNA destruction by miniature CRISPR-Cas14 enzymes
2018 StandoutScienceNobel
CRISPR Recognition Tool (CRT): a tool for automatic detection of clustered regularly \ninterspaced palindromic repeats
2008
Kinase requirements in human cells: III. Altered kinase requirements inVHL−/− cancer cells detected in a pilot synthetic lethal screen
2008 StandoutNobel
The mammalian central nervous synaptic cleft contains a high density of periodically organized complexes
2005 StandoutNobel
Cas9 interrogates DNA in discrete steps modulated by mismatches and supercoiling
2020 StandoutNobel
Large-scale analysis of the human and mouse transcriptomes
2002 StandoutNobel
Identification of many microRNAs that copurify with polyribosomes in mammalian neurons
2003 StandoutNobel
Combining biological networks to predict genetic interactions
2004
mut-16 and other mutator class genes modulate 22G and 26G siRNA pathways in Caenorhabditis elegans
2011 StandoutNobel
Streamlining and Simplification of Microbial Genome Architecture
2006
Comparative Metagenomics of Microbial Communities
2005 Science
Computational design of a red fluorophore ligase for site-specific protein labeling in living cells
2014 StandoutNobel
A simple physical model for binding energy hot spots in protein–protein complexes
2002 StandoutNobel
Works of Mark D’Souza being referenced
Use of Contiguity on the Chromosome to Predict Functional Coupling
1999
Searching for patterns in genomic data
1997
The use of gene clusters to infer functional coupling
1999
From Genetic Footprinting to Antimicrobial Drug Targets: Examples in Cofactor Biosynthetic Pathways
2002