Citation Impact
Citing Papers
Exact sequence variants should replace operational taxonomic units in marker-gene data analysis
2017 Standout
Characterising and predicting cyanobacterial blooms in an 8-year amplicon sequencing time course
2017
Comparative metagenomic, phylogenetic and physiological analyses of soil microbial communities across nitrogen gradients
2011
Secretory antibodies in breast milk promote long-term intestinal homeostasis by regulating the gut microbiota and host gene expression
2014
Association between Upper Digestive Tract Microbiota and Cancer-Predisposing States in the Esophagus and Stomach
2014
Management of Helicobacter pylori infection—the Maastricht V/Florence Consensus Report
2016 Standout
Advancing Our Understanding of the Human Microbiome Using QIIME
2013
Evidence for a core gut microbiota in the zebrafish
2011
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
2014 Standout
Normalization and microbial differential abundance strategies depend upon data characteristics
2017
Complex host genetics influence the microbiome in inflammatory bowel disease
2014
Subsistence strategies in traditional societies distinguish gut microbiomes
2015
Modulation of gut microbiota by berberine and metformin during the treatment of high-fat diet-induced obesity in rats
2015 Standout
Community differentiation of the cutaneous microbiota in psoriasis
2013
Using community analysis to explore bacterial indicators for disease suppression of tobacco bacterial wilt
2016
Multiple sclerosis patients have a distinct gut microbiota compared to healthy controls
2016 Standout
Associations between gut microbiota and genetic risk for rheumatoid arthritis in the absence of disease: a cross-sectional study
2020
Gut microbiome composition and function in experimental colitis during active disease and treatment-induced remission
2014
Bacterial microbiota of the upper respiratory tract and childhood asthma
2016
Embracing the unknown: disentangling the complexities of the soil microbiome
2017 Standout
Antibiotics in early life alter the murine colonic microbiome and adiposity
2012 Nature
The re-emergence of natural products for drug discovery in the genomics era
2015 Standout
Environmental and health effects of the herbicide glyphosate
2017 Standout
Unveiling the gut microbiota composition and functionality associated with constipation through metagenomic analyses
2017
Interactions between the microbiota, immune and nervous systems in health and disease
2017 Standout
Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible
2014 Standout
Human Genetics Shape the Gut Microbiome
2014 Standout
Plant–microbiome interactions: from community assembly to plant health
2020 Standout
Gut biogeography of the bacterial microbiota
2015 Standout
Early microbial and metabolomic signatures predict later onset of necrotizing enterocolitis in preterm infants
2013
Microbial communities in placentas from term normal pregnancy exhibit spatially variable profiles
2017
Horizontal Gene Transfer from Diverse Bacteria to an Insect Genome Enables a Tripartite Nested Mealybug Symbiosis
2013 Standout
Microbiome Datasets Are Compositional: And This Is Not Optional
2017 Standout
Computational approaches to RNA structure prediction, analysis, and design
2011
Targeted deletion of MyD88 in intestinal epithelial cells results in compromised antibacterial immunity associated with downregulation of polymeric immunoglobulin receptor, mucin-2, and antibacterial peptides
2012
Expert consensus document: The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of prebiotics
2017 Standout
Diversity of the Vaginal Microbiome Correlates With Preterm Birth
2013
The Human Intestinal Microbiome in Health and Disease
2016 Standout
Intricacies of assessing the human microbiome in epidemiologic studies
2016
Composition, Diversity, and Origin of the Bacterial Community in Grass Carp Intestine
2012 Standout
Complete nitrification by Nitrospira bacteria
2015 StandoutNature
High throughput sequencing methods and analysis for microbiome research
2013
Modulation of Fecal Clostridiales Bacteria and Butyrate by Probiotic Intervention with Lactobacillus paracasei DG Varies among Healthy Adults
2014
The early infant gut microbiome varies in association with a maternal high-fat diet
2016
What is a resistance gene? Ranking risk in resistomes
2014 Standout
Sequencing our way towards understanding global eukaryotic biodiversity
2012
Novel Gut-Based Pharmacology of Metformin in Patients with Type 2 Diabetes Mellitus
2014
Joint effects of pregnancy, sociocultural, and environmental factors on early life gut microbiome structure and diversity
2016
Gut microbiome and health: mechanistic insights
2022 Standout
Sebum and Hydration Levels in Specific Regions of Human Face Significantly Predict the Nature and Diversity of Facial Skin Microbiome
2016
Supplementation with Akkermansia muciniphila in overweight and obese human volunteers: a proof-of-concept exploratory study
2019 Standout
Diet–microbiota interactions as moderators of human metabolism
2016 StandoutNature
Gut–brain axis: how the microbiome influences anxiety and depression
2013 Standout
Gut microbiome alterations in Alzheimer’s disease
2017 Standout
Understanding the mechanisms and drivers of antimicrobial resistance
2015 Standout
Quantitative microbiome profiling links gut community variation to microbial load
2017 Nature
A DNA-Based Registry for All Animal Species: The Barcode Index Number (BIN) System
2013 Standout
Expanding the UniFrac Toolbox
2016
Bacterial Communities Associated with the Surfaces of Fresh Fruits and Vegetables
2013
Current understanding of the human microbiome
2018 Standout
Antibiotic resistance in the environment
2021 Standout
Altered enteric microbiota ecology in interleukin 10-deficient mice during development and progression of intestinal inflammation
2013
Structure and Function of the Bacterial Root Microbiota in Wild and Domesticated Barley
2015
Tackling antibiotic resistance: the environmental framework
2015 Standout
Keystone taxa as drivers of microbiome structure and functioning
2018 Standout
Proteobacteria: microbial signature of dysbiosis in gut microbiota
2015 Standout
Ecology and exploration of the rare biosphere
2015
Integrative analysis of environmental sequences using MEGAN4
2011
Human gut colonisation may be initiated in utero by distinct microbial communities in the placenta and amniotic fluid
2016
Bacterial phylogeny structures soil resistomes across habitats
2014 Nature
Antibacterial drug discovery in the resistance era
2016 StandoutNature
Dysbiosis in the Gut Microbiota of Patients with Multiple Sclerosis, with a Striking Depletion of Species Belonging to Clostridia XIVa and IV Clusters
2015
Distinct Polysaccharide Utilization Determines Interspecies Competition between Intestinal Prevotella spp.
2020 StandoutNobel
The pros, cons, and many unknowns of probiotics
2019 Standout
Belowground biodiversity and ecosystem functioning
2014 StandoutNature
Gut microbiota in human metabolic health and disease
2020 Standout
Modeling nucleic acids
2012 StandoutNobel
The human skin microbiome
2018 Standout
Temporal variability in soil microbial communities across land-use types
2013
Cross-biome metagenomic analyses of soil microbial communities and their functional attributes
2012 Standout
Soil quality – A critical review
2018 Standout
Plasma levels of trimethylamine-N-oxide can be increased with ‘healthy’ and ‘unhealthy’ diets and do not correlate with the extent of atherosclerosis but with plaque instability
2020
Broad host range plasmids can invade an unexpectedly diverse fraction of a soil bacterial community
2014
Psoriasis Pathogenesis and Treatment
2019 Standout
The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes
2015 Standout
Structure, variation, and assembly of the root-associated microbiomes of rice
2015 Standout
Open-Source Sequence Clustering Methods Improve the State Of the Art
2016
A phylogenetic transform enhances analysis of compositional microbiota data
2017
The First Microbial Colonizers of the Human Gut: Composition, Activities, and Health Implications of the Infant Gut Microbiota
2017 Standout
Soil rotifer communities are extremely diverse globally but spatially autocorrelated locally
2011
Preterm labor: One syndrome, many causes
2014 StandoutScience
A general species delimitation method with applications to phylogenetic placements
2013 Standout
What Is the Role of Archaea in Plants? New Insights from the Vegetation of Alpine Bogs
2018
Impaired T cell receptor signaling and development of T cell–mediated autoimmune arthritis
2020 StandoutNobel
Caenorhabditis elegans responses to bacteria from its natural habitats
2016 StandoutNobel
Corneal surface glycosylation is modulated by IL‐1R and Pseudomonas aeruginosa challenge but is insufficient for inhibiting bacterial binding
2017 StandoutNobel
Targeting the Human Genome–Microbiome Axis for Drug Discovery: Inspirations from Global Systems Biology and Traditional Chinese Medicine
2012
Works of Manuel E. Lladser being referenced
Natural and artificial RNAs occupy the same restricted region of sequence space
2009
Balance Trees Reveal Microbial Niche Differentiation
2017
UniFrac: an effective distance metric for microbial community comparison
2010 Standout