Citation Impact
Citing Papers
Protein interaction networks revealed by proteome coevolution
2019 StandoutScienceNobel
Structure of apo-CAP reveals that large conformational changes are necessary for DNA binding
2009 StandoutNobel
C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector
2016 StandoutScience
The Genetic Basis for Bacterial Mercury Methylation
2013 StandoutScience
Origins of coevolution between residues distant in protein 3D structures
2017 StandoutNobel
13 C NMR Characterization of an Exchange Reaction between CO and CO 2 Catalyzed by Carbon Monoxide Dehydrogenase
2008
Identification of direct residue contacts in protein–protein interaction by message passing
2008
RcoM: A New Single-Component Transcriptional Regulator of CO Metabolism in Bacteria
2008
Protein structure determination using metagenome sequence data
2017 StandoutScienceNobel
Assessing the utility of coevolution-based residue–residue contact predictions in a sequence- and structure-rich era
2013 StandoutNobel
The genome sequence of Bifidobacterium longum subsp. infantis reveals adaptations for milk utilization within the infant microbiome
2008
Characterization of a thermostable methylaspartate ammonia lyase from Carboxydothermus hydrogenoformans
2011 StandoutNobel
The role of short-chain fatty acids in the interplay between diet, gut microbiota, and host energy metabolism
2013 Standout
Discovery of archaeal fusexins homologous to eukaryotic HAP2/GCS1 gamete fusion proteins
2022 StandoutNobel
Microbial structuring of marine ecosystems
2007
Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME‐1 group
2009
Plant–microbiome interactions: from community assembly to plant health
2020 Standout
An overview of RNAs with regulatory functions in gram-positive bacteria
2009 StandoutNobel
Quorum sensing signal–response systems in Gram-negative bacteria
2016 Standout
Self-Organization of the Escherichia coli Chemotaxis Network Imaged with Super-Resolution Light Microscopy
2009 StandoutNobel
Proteorhodopsins: an array of physiological roles?
2008
Extra cytoplasmic function σ factor activation
2012
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
2015 Standout
The Heat Shock Response: Life on the Verge of Death
2010 Standout
Different roles for anti‐sigma factors in siderophore signalling pathways of Pseudomonas aeruginosa
2009
A Qrr Noncoding RNA Deploys Four Different Regulatory Mechanisms to Optimize Quorum-Sensing Dynamics
2015
Microbial nitrate respiration – Genes, enzymes and environmental distribution
2011
[FeFe] hydrogenases and their evolution: a genomic perspective
2007
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
2018 Standout
From Dietary Fiber to Host Physiology: Short-Chain Fatty Acids as Key Bacterial Metabolites
2016 Standout
Improved protein structure prediction using potentials from deep learning
2020 StandoutNatureNobel
Evolution and classification of the CRISPR–Cas systems
2011 StandoutNobel
Bacterial sulfite-oxidizing enzymes
2010
Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage
2013 StandoutNature
Look on the positive side! The orientation, identification and bioenergetics of âArchaealâ membrane-bound nitrate reductases
2007
Fungal volatile compounds induce production of the secondary metabolite Sodorifen in Serratia plymuthica PRI-2C
2017
Phylogeny of Bacterial and Archaeal Genomes Using Conserved Genes: Supertrees and Supermatrices
2013
Hydrogenases from Methanogenic Archaea, Nickel, a Novel Cofactor, and H2 Storage
2010
Preparation of [Fe]-Hydrogenase from Methanogenic Archaea
2011
Structural Basis for Electron and Methyl-Group Transfer in a Methyltransferase System Operating in the Reductive Acetyl-CoA Pathway
2011
A structural model of anti‐anti‐σ inhibition by a two‐component receiver domain: the PhyR stress response regulator
2010
Photocatalytic Reduction of CO2 on TiO2 and Other Semiconductors
2013 Standout
Structure–function relationships of anaerobic gas-processing metalloenzymes
2009 Nature
Kinetic Resolution and Stereoselective Synthesis of 3‐Substituted Aspartic Acids by Using Engineered Methylaspartate Ammonia Lyases
2013 StandoutNobel
Comprehensive comparative-genomic analysis of Type 2 toxin-antitoxin systems and related mobile stress response systems in prokaryotes
2009
Acetogenesis and the Wood–Ljungdahl pathway of CO2 fixation
2008 Standout
Bifidobacteria can protect from enteropathogenic infection through production of acetate
2011 StandoutNature
Optogenetics in Neural Systems
2011 Standout
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
2015 Standout
The Bacillus subtilis endospore: assembly and functions of the multilayered coat
2012
Direct-coupling analysis of residue coevolution captures native contacts across many protein families
2011
General stress response in α‐proteobacteria: PhyR and beyond
2010
Titanium Dioxide-Based Nanomaterials for Photocatalytic Fuel Generations
2014 Standout
Copper Active Sites in Biology
2014 Standout
Regulation of Alternative Sigma Factor Use
2010 Standout
Molecular Architecture of the "Stressosome," a Signal Integration and Transduction Hub
2008 Science
Archaeal Clusters of Orthologous Genes (arCOGs): An Update and Application for Analysis of Shared Features between Thermococcales, Methanococcales, and Methanobacteriales
2015
CO2 photoreduction at enzyme-modified metal oxide nanoparticles
2011
NasT-Mediated Antitermination Plays an Essential Role in the Regulation of the Assimilatory Nitrate Reductase Operon in Azotobacter vinelandii
2012
Succession of microbial consortia in the developing infant gut microbiome
2010 Standout
Structure and Function of Plant Photoreceptors
2010
Occurrence, Classification, and Biological Function of Hydrogenases: An Overview
2007 Standout
Predicting strength and function for promoters of the Escherichia coli alternative sigma factor, σ E
2010
Protein structure prediction using multiple deep neural networks in the 13th Critical Assessment of Protein Structure Prediction (CASP13)
2019 StandoutNobel
Receptor density balances signal stimulation and attenuation in membrane-assembled complexes of bacterial chemotaxis signaling proteins
2008
Hydrogenases
2014 Standout
Robust and accurate prediction of residue–residue interactions across protein interfaces using evolutionary information
2014 StandoutNobel
Osmosensory signaling in Mycobacterium tuberculosis mediated by a eukaryotic-like Ser/Thr protein kinase
2013 StandoutNobel
On the origin of biochemistry at an alkaline hydrothermal vent
2006
Evolutionary-scale prediction of atomic-level protein structure with a language model
2023 StandoutScience
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
2018 Standout
Frontiers, Opportunities, and Challenges in Biochemical and Chemical Catalysis of CO2 Fixation
2013 Standout
Catalysis for CO2 conversion: a key technology for rapid introduction of renewable energy in the value chain of chemical industries
2013 Standout
New insights into the electrochemical reduction of carbon dioxide on metallic copper surfaces
2012 Standout
Engineering of temperature- and light-switchable Cas9 variants
2013 StandoutNobel
The Mononuclear Molybdenum Enzymes
2014 Standout
The complete genome sequence of Moorella thermoacetica (f. Clostridium thermoaceticum )
2008
Resistance, resilience, and redundancy in microbial communities
2008 Standout
Cocatalysts for Selective Photoreduction of CO2into Solar Fuels
2019 Standout
Origins and Evolution of Antibiotic Resistance
2010 Standout
Bacterial nitrate assimilation: gene distribution and regulation
2011
Catalytic Mechanisms and Biocatalytic Applications of Aspartate and Methylaspartate Ammonia Lyases
2012
Self-Organization of the Escherichia Coli Chemotaxis Network Imaged with Super-Resolution Light Microscopy
2010 StandoutNobel
IMG ER: a system for microbial genome annotation expert review and curation
2009
Advanced Nanoarchitectures for Solar Photocatalytic Applications
2011 Standout
Structural Classification of Bacterial Response Regulators: Diversity of Output Domains and Domain Combinations
2006
Efficient and Clean Photoreduction of CO2 to CO by Enzyme-Modified TiO2 Nanoparticles Using Visible Light
2010
Protein contact prediction using metagenome sequence data and residual neural networks
2019 StandoutNobel
Quorum Sensing in Staphylococci
2008
Works of Luke E. Ulrich being referenced
One-component systems dominate signal transduction in prokaryotes
2004
The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) σ factor protein family
2009
MiST: a microbial signal transduction database
2006
The MiST2 database: a comprehensive genomics resource on microbial signal transduction
2009
The complete genome sequence of Staphylothermus marinus reveals differences in sulfur metabolism among heterotrophic Crenarchaeota
2009
Life in Hot Carbon Monoxide: The Complete Genome Sequence of Carboxydothermus hydrogenoformans Z-2901
2005
Genomic Characterization of Methanomicrobiales Reveals Three Classes of Methanogens
2009
The NIT domain: a predicted nitrate-responsive module in bacterial sensory receptors
2003
Analysis of Activator and Repressor Functions Reveals the Requirements for Transcriptional Control by LuxR, the Master Regulator of Quorum Sensing in Vibrio harveyi
2013
Four-helix bundle: a ubiquitous sensory module in prokaryotic signal transduction
2005
Ecological Genomics of Marine Roseobacters
2007