Citation Impact
Citing Papers
Characterizing and explaining the impact of disease-associated mutations in proteins without known structures or structural homologs
2022 StandoutNobel
De novo design of transmembrane β barrels
2021 StandoutScienceNobel
Tight and specific lanthanide binding in a de novo TIM barrel with a large internal cavity designed by symmetric domain fusion
2020 StandoutNobel
Structural basis for membrane insertion by the human ER membrane protein complex
2020 Science
Protein structure determination using metagenome sequence data
2017 StandoutScienceNobel
Sculpting conducting nanopore size and shape through de novo protein design
2024 StandoutScienceNobel
The Stability Landscape of de novo TIM Barrels Explored by a Modular Design Approach
2021 StandoutNobel
Inverting family GH156 sialidases define an unusual catalytic motif for glycosidase action
2019 StandoutNobel
Computational design of soluble and functional membrane protein analogues
2024 StandoutNatureNobel
Gctf: Real-time CTF determination and correction
2015 Standout
De novo design of immunoglobulin-like domains
2022 StandoutNobel
Discovery of archaeal fusexins homologous to eukaryotic HAP2/GCS1 gamete fusion proteins
2022 StandoutNobel
PDBsum additions
2013
Channel opening and gating mechanism in AMPA-subtype glutamate receptors
2017 StandoutNatureNobel
PLIP: fully automated protein–ligand interaction profiler
2015 Standout
Structure-based drug repositioning over the human TMPRSS2 protease domain: search for chemical probes able to repress SARS-CoV-2 Spike protein cleavages
2020
The trRosetta server for fast and accurate protein structure prediction
2021 StandoutNobel
Reactive oxygen species (ROS) as pleiotropic physiological signalling agents
2020 Standout
Defining the mechanism of action of S1QELs, specific suppressors of superoxide production in the quinone-reaction site in mitochondrial complex I
2019
Atomic structure of anthrax protective antigen pore elucidates toxin translocation
2015 Nature
The MEROPS database of proteolytic enzymes, their substrates and inhibitors in 2017 and a comparison with peptidases in the PANTHER database
2017
Chemistry of Class 1 CRISPR-Cas effectors: Binding, editing, and regulation
2020 StandoutNobel
CHEXVIS: a tool for molecular channel extraction and visualization
2015
Structural Bases of Desensitization in AMPA Receptor-Auxiliary Subunit Complexes
2017 StandoutNobel
CryoEM at IUCrJ: a new era
2015 StandoutNobel
Pfam: The protein families database in 2021
2020 Standout
Elucidation of AMPA receptor–stargazin complexes by cryo–electron microscopy
2016 StandoutScienceNobel
PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools
2018 Standout
SIFTS: updated Structure Integration with Function, Taxonomy and Sequences resource allows 40-fold increase in coverage of structure-based annotations for proteins
2018
Search and sequence analysis tools services from EMBL-EBI in 2022
2022 Standout
The Pfam protein families database in 2019
2018 Standout
Inhibition mechanisms of AcrF9, AcrF8, and AcrF6 against type I-F CRISPR–Cas complex revealed by cryo-EM
2020
The EMBL-EBI search and sequence analysis tools APIs in 2019
2019 Standout
SWISS-MODEL: homology modelling of protein structures and complexes
2018 Standout
Structure of an agonist-bound ionotropic glutamate receptor
2014 Science
Crystal structure of an Fe-S cluster-containing fumarate hydratase enzyme from Leishmania major reveals a unique protein fold
2016
Andrographolide as a potential inhibitor of SARS-CoV-2 main protease: an in silico approach
2020 Standout
An investigation into the identification of potential inhibitors of SARS-CoV-2 main protease using molecular docking study
2020 Standout
VarSite: Disease variants and protein structure
2019
Comprehensive characterization of amino acid positions in protein structures reveals molecular effect of missense variants
2020
De novo design of small beta barrel proteins
2023 StandoutNobel
HMMER web server: 2018 update
2018 Standout
Targeting SARS-CoV-2: a systematic drug repurposing approach to identify promising inhibitors against 3C-like proteinase and 2′-O-ribose methyltransferase
2020
CASTp 3.0: computed atlas of surface topography of proteins
2018 Standout
Works of Lukáš Pravda being referenced
MOLE 2.0: advanced approach for analysis of biomacromolecular channels
2013
Anatomy of enzyme channels
2014
PDBsum: Structural summaries of PDB entries
2017
MOLEonline: a web-based tool for analyzing channels, tunnels and pores (2018 update)
2018