Standout Papers
Citation Impact
Citing Papers
Three-dimensional intact-tissue sequencing of single-cell transcriptional states
2018 Science
Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells
2010 StandoutScience
Spatially resolved, highly multiplexed RNA profiling in single cells
2015 StandoutScience
Single-cell profiling of the developing mouse brain and spinal cord with split-pool barcoding
2018 Science
Probing Gene Expression in Live Cells, One Protein Molecule at a Time
2006 Science
Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq
2015 StandoutScience
Nucleic acid detection with CRISPR-Cas13a/C2c2
2017 StandoutScience
Single molecules of the bacterial actin MreB undergo directed treadmilling motion in Caulobacter crescentus
2006 StandoutNobel
p53 Dynamics Control Cell Fate
2012 Science
A sex-biased imbalance between Tfr, Tph, and atypical B cells determines antibody responses in COVID-19 patients
2023 StandoutNobel
Effects of Molecular Memory and Bursting on Fluctuations in Gene Expression
2008 Science
Fast molecular tracking maps nanoscale dynamics of plasma membrane lipids
2010 StandoutNobel
Counting Low-Copy Number Proteins in a Single Cell
2007 StandoutScienceNobel
Molecular, spatial, and functional single-cell profiling of the hypothalamic preoptic region
2018 Science
Super‐resolution imaging for cell biologists
2015
Discovery and functional interrogation of SARS-CoV-2 RNA-host protein interactions
2021 StandoutNobel
Inference and analysis of cell-cell communication using CellChat
2021 Standout
The promise and challenge of therapeutic genome editing
2020 StandoutNatureNobel
Three-dimensional tracking of single mRNA particles in Saccharomyces cerevisiae using a double-helix point spread function
2010 StandoutNobel
Spatial organization of the somatosensory cortex revealed by osmFISH
2018
Carbon Nanomaterials in Biosensors: Should You Use Nanotubes or Graphene?
2010
A Structured Tumor-Immune Microenvironment in Triple Negative Breast Cancer Revealed by Multiplexed Ion Beam Imaging
2018
Genetically Encoded Spy Peptide Fusion System to Detect Plasma Membrane-Localized Proteins In Vivo
2015 StandoutNobel
Experimental Observation of Revival Structures in Picosecond Laser-Induced Alignment of I2
2001
A single molecule view of gene expression
2009
Stochastic gene expression out-of-steady-state in the cyanobacterial circadian clock
2007 Nature
Modular and tunable biological feedback control using a de novo protein switch
2019 StandoutNatureNobel
Cre-dependent selection yields AAV variants for widespread gene transfer to the adult brain
2016
Single-cell chromatin accessibility reveals principles of regulatory variation
2015 Nature
Laser-Induced Alignment and Orientation of Quantum-State-Selected Large Molecules
2009
Deconstructing transcriptional heterogeneity in pluripotent stem cells
2014 Nature
Nature, Nurture, or Chance: Stochastic Gene Expression and Its Consequences
2008 Standout
Identification of endoribonuclease specific cleavage positions reveals novel targets of RNase III inStreptococcus pyogenes
2017 StandoutNobel
Evolutionary Convergence of Pathway-Specific Enzyme Expression Stoichiometry
2018
Expansion microscopy with conventional antibodies and fluorescent proteins
2016
The transcription unit architecture of the Escherichia coli genome
2009
Angular Focusing, Squeezing, and Rainbow Formation in a Strongly Driven Quantum Rotor
2001
Single-molecule mRNA detection and counting in mammalian tissue
2013
Tomographic imaging of molecular orbitals
2004 StandoutNature
Quantifying transcription factor kinetics: At work or at play?
2013
Spatially resolved transcriptomics and beyond
2014
Super-resolution microscopy demystified
2018 Standout
The changing landscape of atherosclerosis
2021 StandoutNature
TRIBE: Hijacking an RNA-Editing Enzyme to Identify Cell-Specific Targets of RNA-Binding Proteins
2016 StandoutNobel
Transcription Dynamics
2009
Tracking Multiple Genomic Elements Using Correlative CRISPR Imaging and Sequential DNA FISH
2017
Single-Cell Multi-omic Integration Compares and Contrasts Features of Brain Cell Identity
2019
Single-Molecule Dynamics of Enhanceosome Assembly in Embryonic Stem Cells
2014 StandoutNobel
TCF1 in T cell immunity: a broadened frontier
2021
Image-based transcriptomics in thousands of single human cells at single-molecule resolution
2013
iDISCO: A Simple, Rapid Method to Immunolabel Large Tissue Samples for Volume Imaging
2014
The single-cell transcriptional landscape of mammalian organogenesis
2019 StandoutNature
Evolution of a designed protein assembly encapsulating its own RNA genome
2017 StandoutNatureNobel
Time-Resolved Electron Diffraction from Selectively Aligned Molecules
2009 StandoutNobel
Coupling and coordination in gene expression processes: a systems biology view
2007
Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells
2013 Nature
Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain
2018
SARS-CoV-2 entry factors are highly expressed in nasal epithelial cells together with innate immune genes
2020 Standout
Bacterial virulence proteins as tools to rewire kinase pathways in yeast and immune cells
2012 Nature
Atlas of Subcellular RNA Localization Revealed by APEX-Seq
2019
Super-resolution biomolecular crystallography with low-resolution data
2010 StandoutNatureNobel
A molecular cell atlas of the human lung from single-cell RNA sequencing
2020 Nature
Heritable Stochastic Switching Revealed by Single-Cell Genealogy
2007
Exploring bacterial cell biology with single-molecule tracking and super-resolution imaging
2013 StandoutNobel
Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets
2015 Standout
Highly multiplexed imaging of tumor tissues with subcellular resolution by mass cytometry
2014
viSNE enables visualization of high dimensional single-cell data and reveals phenotypic heterogeneity of leukemia
2013
General properties of transcriptional time series in Escherichia coli
2011
Orientation of Polar Molecules by Laser Induced Adiabatic Passage
2002
The next generation of CRISPR–Cas technologies and applications
2019
The biogenesis, biology and characterization of circular RNAs
2019 Standout
Simultaneous lineage tracing and cell-type identification using CRISPR–Cas9-induced genetic scars
2018
Exponential scaling of single-cell RNA-seq in the past decade
2018
Precise Access to the Molecular-Frame Complex Recombination Dipole through High-Harmonic Spectroscopy
2017 StandoutNobel
Droplet Barcoding for Single-Cell Transcriptomics Applied to Embryonic Stem Cells
2015 Standout
The role of senescent cells in ageing
2014 StandoutNature
Nanoscale imaging of clinical specimens using pathology-optimized expansion microscopy
2017
A Single-Cell Atlas of In Vivo Mammalian Chromatin Accessibility
2018
Distinct Cellular Mechanisms Underlie Anti-CTLA-4 and Anti-PD-1 Checkpoint Blockade
2017 StandoutNobel
Controlling the Orientation of Polar Molecules with Combined Electrostatic and Pulsed, Nonresonant Laser Fields
2003
Whole-organism clone tracing using single-cell sequencing
2018 Nature
Global quantification of mammalian gene expression control
2011 StandoutNature
Integrative single-cell analysis
2019
Comprehensive Integration of Single-Cell Data
2019 Standout
Organoid single-cell genomic atlas uncovers human-specific features of brain development
2019 StandoutNatureNobel
Small RNAs are modified with N-glycans and displayed on the surface of living cells
2021 StandoutNobel
Dynamic regulation of transcriptional states by chromatin and transcription factors
2013
Field-Free Orientation of Molecules
2001
In vivo 3′-to-5′ exoribonuclease targetomes of Streptococcus pyogenes
2018 StandoutNobel
Interface‐Engineered Bistable [2]Rotaxane‐Graphene Hybrids with Logic Capabilities
2013 StandoutNobel
Single Cell RNA Sequencing in Atherosclerosis Research
2020
Genomes in Focus: Development and Applications of CRISPR‐Cas9 Imaging Technologies
2017 StandoutNobel
Quantifying E. coli Proteome and Transcriptome with Single-molecule Sensitivity in Single Cells
2011
Single-Molecule Approach to Molecular Biology in Living Bacterial Cells
2008
Colored extrinsic fluctuations and stochastic gene expression
2008
Using variability in gene expression as a tool for studying gene regulation
2013
Single-Molecule Approaches to Stochastic Gene Expression
2009
Genetic Determinants and Cellular Constraints in Noisy Gene Expression
2013 Science
The Human Cell Atlas
2017
Revival structures in picosecond laser-induced alignment of I2 molecules. II. Numerical modeling
2002
On the dynamics of rotationally broad, spatially aligned wave packets
2001
Postpulse alignment of molecules robust to thermal averaging
2001
Single-chromosome transcriptional profiling reveals chromosomal gene expression regulation
2013
Revival structures in picosecond laser-induced alignment of I2 molecules. I. Experimental results
2002
Transcription factor profiling in individual hematopoietic progenitors by digital RT-PCR
2006
High-Throughput Single Copy DNA Amplification and Cell Analysis in Engineered Nanoliter Droplets
2008
Small-Molecule Labeling of Live Cell Surfaces for Three-Dimensional Super-Resolution Microscopy
2014 StandoutNobel
Carbon Nanomaterials for Biological Imaging and Nanomedicinal Therapy
2015 Standout
New directions in single-molecule imaging and analysis
2007 StandoutNobel
A Fluorogenic Trehalose Probe for Tracking Phagocytosed Mycobacterium tuberculosis
2020 StandoutNobel
Single-cell epigenomics: Recording the past and predicting the future
2017 Science
Colloquium: Aligning molecules with strong laser pulses
2003 Standout
Fluorescent Mycobacterium tuberculosis reporters: illuminating host–pathogen interactions
2018
CalFluors: A Universal Motif for Fluorogenic Azide Probes across the Visible Spectrum
2015 StandoutNobel
Chemical Glycoproteomics
2016 StandoutNobel
Structure-guided SCHEMA recombination generates diverse chimeric channelrhodopsins
2017 StandoutNobel
Integrated microfluidic bioprocessor for single-cell gene expression analysis
2008 StandoutNobel
Works of Long Cai being referenced
A Stochastic Single-Molecule Event Triggers Phenotype Switching of a Bacterial Cell
2008 Science
Challenges and emerging directions in single-cell analysis
2017
Synthetic recording and in situ readout of lineage information in single cells
2016 Nature
Linking Stochastic Dynamics to Population Distribution: An Analytical Framework of Gene Expression
2006
Dynamic Heterogeneity and DNA Methylation in Embryonic Stem Cells
2014
seqFISH Accurately Detects Transcripts in Single Cells and Reveals Robust Spatial Organization in the Hippocampus
2017
Time-Dependent Alignment and Orientation of Molecules in Combined Electrostatic and Pulsed Nonresonant Laser Fields
2001
Identification of spatially associated subpopulations by combining scRNAseq and sequential fluorescence in situ hybridization data
2018
The adult human testis transcriptional cell atlas
2018
Stochastic protein expression in individual cells at the single molecule level
2006 Nature
In Situ Transcription Profiling of Single Cells Reveals Spatial Organization of Cells in the Mouse Hippocampus
2016
Whole-body tissue stabilization and selective extractions via tissue-hydrogel hybrids for high-resolution intact circuit mapping and phenotyping
2015
Single-Cell Phenotyping within Transparent Intact Tissue through Whole-Body Clearing
2014
Single-Cell Analysis Reveals Regulatory Gene Expression Dynamics Leading to Lineage Commitment in Early T Cell Development
2019
Frequency-modulated nuclear localization bursts coordinate gene regulation
2008 Nature
Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH+
2019 Nature
Dense transcript profiling in single cells by image correlation decoding
2016
Single-cell systems biology by super-resolution imaging and combinatorial labeling
2012
Single-molecule RNA detection at depth by hybridization chain reaction and tissue hydrogel embedding and clearing
2016