Citation Impact

Citing Papers

Cyclic GMP-AMP Synthase Is a Cytosolic DNA Sensor That Activates the Type I Interferon Pathway
2012 StandoutScience
Many human large intergenic noncoding RNAs associate with chromatin-modifying complexes and affect gene expression
2009 Standout
Long Noncoding RNA as Modular Scaffold of Histone Modification Complexes
2010 StandoutScience
Amplification of Long Noncoding RNA ZFAS1 Promotes Metastasis in Hepatocellular Carcinoma
2015
Human long non‐coding RNAs promote pluripotency and neuronal differentiation by association with chromatin modifiers and transcription factors
2011
Long non-coding RNA ZFAS1 interacts with CDK1 and is involved in p53-dependent cell cycle control and apoptosis in colorectal cancer
2015
Integration of Genome-wide Approaches Identifies lncRNAs of Adult Neural Stem Cells and Their Progeny In Vivo
2013
Long noncoding RNA PVT1 indicates a poor prognosis of gastric cancer and promotes cell proliferation through epigenetically regulating p15 and p16
2015
Hypoxia induces the breast cancer stem cell phenotype by HIF-dependent and ALKBH5-mediated m 6 A-demethylation of NANOG mRNA
2016 StandoutNobel
An integrated encyclopedia of DNA elements in the human genome
2012 StandoutNature
Long noncoding RNA genes: conservation of sequence and brain expression among diverse amniotes
2010
lncRNAdb: a reference database for long noncoding RNAs
2010
lincRNAs: Genomics, Evolution, and Mechanisms
2013 Standout
RNA traffic control of chromatin complexes
2010
Control of somatic tissue differentiation by the long non-coding RNA TINCR
2012 StandoutNature
The Genetic Signatures of Noncoding RNAs
2009
Circular RNAs are a large class of animal RNAs with regulatory potency
2013 StandoutNature
CpG islands and the regulation of transcription
2011 Standout
Elevation of Highly Up-regulated in Liver Cancer (HULC) by Hepatitis B Virus X Protein Promotes Hepatoma Cell Proliferation via Down-regulating p18
2012
Non-coding RNAs as regulators of embryogenesis
2011
Making sense of Dlx1 antisense RNA
2013
Modular regulatory principles of large non-coding RNAs
2012 StandoutNature
Structural architecture of the human long non-coding RNA, steroid receptor RNA activator
2012
Deubiquitinating Enzymes: Their Diversity and Emerging Roles
1999
N6-methyladenosine Modulates Messenger RNA Translation Efficiency
2015 Standout
The Nuclear-Retained Noncoding RNA MALAT1 Regulates Alternative Splicing by Modulating SR Splicing Factor Phosphorylation
2010 Standout
Long Noncoding RNAs: Emerging Stars in Gene Regulation, Epigenetics and Human Disease
2014
Catalogues of mammalian long noncoding RNAs: modest conservation and incompleteness
2009
Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
2009 StandoutNature
Conserved Function of lincRNAs in Vertebrate Embryonic Development despite Rapid Sequence Evolution
2011
Genome-wide analysis of long noncoding RNA stability
2012
Cisplatin and paclitaxel target significant long noncoding RNAs in laryngeal squamous cell carcinoma
2014
H3K27 acetylation activated-long non-coding RNA CCAT1 affects cell proliferation and migration by regulating SPRY4 and HOXB13 expression in esophageal squamous cell carcinoma
2016
Long non-coding RNAs: A new frontier in the study of human diseases
2013
A ceRNA Hypothesis: The Rosetta Stone of a Hidden RNA Language?
2011 Standout
Increased expression of long noncoding RNA TUG1 predicts a poor prognosis of gastric cancer and regulates cell proliferation by epigenetically silencing of p57
2016
The multilayered complexity of ceRNA crosstalk and competition
2014 StandoutNature
Differentiating Protein-Coding and Noncoding RNA: Challenges and Ambiguities
2008
MALAT‐1 interacts with hnRNP C in cell cycle regulation
2013
Conserved tissue expression signatures of intronic noncoding RNAs transcribed from human and mouse loci
2008
Evolution to the rescue: using comparative genomics to understand long non-coding RNAs
2016
Long non-coding RNAs as regulators of the endocrine system
2015
The relationship between non‐protein‐coding DNA and eukaryotic complexity
2007
Transposable Elements Are Major Contributors to the Origin, Diversification, and Regulation of Vertebrate Long Noncoding RNAs
2013
Hypoxia drives glucose transporter 3 expression through hypoxia-inducible transcription factor (HIF)–mediated induction of the long noncoding RNA NICI
2019 StandoutNobel
Rapid evolution of noncoding RNAs: lack of conservation does not mean lack of function
2005
Functionality or transcriptional noise? Evidence for selection within long noncoding RNAs
2007
The Histone Chaperone Spt6 Is Required for Activation-induced Cytidine Deaminase Target Determination through H3K4me3 Regulation
2012 StandoutNobel
Rasputin, more promiscuous than ever: a review of G3BP
2004
Raising the estimate of functional human sequences: Figure 1.
2007
Comprehensive classification of nucleotidyltransferase fold proteins: identification of novel families and their representatives in human
2009
Overlapping transcripts, double-stranded RNA and antisense regulation: A genomic perspective
2006
Noncoding RNA in development
2008
Long non-coding RNAs: new players in cell differentiation and development
2013 Standout
Intrinsic Immunity Shapes Viral Resistance of Stem Cells
2017 StandoutNobel
An atlas of tissue-specific conserved coexpression for functional annotation and disease gene prediction
2011
Non-coding RNA
2006 Standout
Tracking and Elucidating Alphavirus-Host Protein Interactions
2006 StandoutNobel
Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses
2011 Standout
Comprehensive Analysis of mRNA Methylation Reveals Enrichment in 3′ UTRs and near Stop Codons
2012 Standout
Conserved long noncoding RNAs transcriptionally regulated by Oct4 and Nanog modulate pluripotency in mouse embryonic stem cells
2009
A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression
2011 StandoutNature
Genomic and Transcriptional Co-Localization of Protein-Coding and Long Non-Coding RNA Pairs in the Developing Brain
2009
Genome-wide computational identification and manual annotation of human long noncoding RNA genes
2010
HISAT: a fast spliced aligner with low memory requirements
2015 Standout
The Reality of Pervasive Transcription
2011
The long noncoding RNA Vax2os1 controls the cell cycle progression of photoreceptor progenitors in the mouse retina
2011
Characterization of the RNA content of chromatin
2010
NRED: a database of long noncoding RNA expression
2008
A diverse range of gene products are effectors of the type I interferon antiviral response
2011 StandoutNatureNobel
Braveheart, a Long Noncoding RNA Required for Cardiovascular Lineage Commitment
2013
The hallmarks of cancer
2012 Standout
Long noncoding RNAs and human disease
2011 Standout
The small RNA repertoire of Dictyostelium discoideum and its regulation by components of the RNAi pathway
2007 StandoutNobel
Complex architecture and regulated expression of the Sox2ot locus during vertebrate development
2009
Overexpression of Long Non-coding RNA HOTAIR Predicts Tumor Recurrence in Hepatocellular Carcinoma Patients Following Liver Transplantation
2011
Genetics and pathogenesis of inflammatory bowel disease
2011 StandoutNature
The dynamic epitranscriptome: N6-methyladenosine and gene expression control
2014
LncRNAs in Stem Cells
2016
Thousands of corresponding human and mouse genomic regions unalignable in primary sequence contain common RNA structure
2006
Expression of distinct RNAs from 3′ untranslated regions
2010
Long noncoding RNAs: Novel insights into hepatocelluar carcinoma
2013
Computational Identification and Functional Predictions of Long Noncoding RNA in Zea mays
2012
FAM/USP9x, a Deubiquitinating Enzyme Essential for TGFβ Signaling, Controls Smad4 Monoubiquitination
2009
Evolution and Functions of Long Noncoding RNAs
2009 Standout
Long non-coding RNA HOTAIR reprograms chromatin state to promote cancer metastasis
2010 StandoutNature
Topological domains in mammalian genomes identified by analysis of chromatin interactions
2012 StandoutNature
lincRNAs act in the circuitry controlling pluripotency and differentiation
2011 StandoutNature
The long noncoding RNA Six3OS acts in trans to regulate retinal development by modulating Six3 activity
2011
linc-HOXA1 is a noncoding RNA that represses Hoxa1 transcription in cis
2013
MEN ε/β nuclear-retained non-coding RNAs are up-regulated upon muscle differentiation and are essential components of paraspeckles
2008
Long Noncoding RNAs: Cellular Address Codes in Development and Disease
2013 Standout
Long noncoding RNAs: functional surprises from the RNA world
2009 Standout
Spatial partitioning of the regulatory landscape of the X-inactivation centre
2012 StandoutNature
Long non-coding RNAs: insights into functions
2009 Standout
The Polycomb complex PRC2 and its mark in life
2011 StandoutNature
Role of YAP/TAZ in mechanotransduction
2011 StandoutNature
A long nuclear‐retained non‐coding RNA regulates synaptogenesis by modulating gene expression
2010
The evolution of gene expression levels in mammalian organs
2011 StandoutNatureNobel
N6-methyladenosine-dependent RNA structural switches regulate RNA–protein interactions
2015 StandoutNature
Chromatin structure and the inheritance of epigenetic information
2010
Genome Regulation by Long Noncoding RNAs
2012 Standout
Long Noncoding RNA and Cancer: A New Paradigm
2017 Standout
Nonimmunoglobulin target loci of activation-induced cytidine deaminase (AID) share unique features with immunoglobulin genes
2012 StandoutNobel
Immuno-Navigator, a batch-corrected coexpression database, reveals cell type-specific gene networks in the immune system
2016 StandoutNobel
Genome-Wide Analysis Uncovers Regulation of Long Intergenic Noncoding RNAs in Arabidopsis
2012
Host Factors Associated with the Sindbis Virus RNA-Dependent RNA Polymerase: Role for G3BP1 and G3BP2 in Virus Replication
2010 StandoutNobel
Guide snoRNAs: Drivers or Passengers in Human Disease?
2018
Long noncoding RNA ZFAS1 promotes gastric cancer cells proliferation by epigenetically repressing KLF2 and NKD2 expression
2016
The function of non-coding RNAs in genomic imprinting
2009
A systematic dissection of determinants and consequences of snoRNA-guided pseudouridylation of human mRNA
2022 StandoutNobel
Regulatory Role of Small Nucleolar RNAs in Human Diseases
2015
Anatomic Demarcation of Cells: Genes to Patterns
2009 Science
PVT1 Exon 9: A Potential Biomarker of Aggressive Prostate Cancer?
2015
Systematic identification of long noncoding RNAs expressed during zebrafish embryogenesis
2011
The Ubiquitin-Proteasome Proteolytic Pathway: Destruction for the Sake of Construction
2002 StandoutNobel
The function of the Drosophila fat facets deubiquitinating enzyme in limiting photoreceptor cell number is intimately associated with endocytosis
2000
Most “Dark Matter” Transcripts Are Associated With Known Genes
2010
Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells
2013

Works of Kelin Ru being referenced

Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome
2005
SNORD-host RNA Zfas1 is a regulator of mammary development and a potential marker for breast cancer
2011
Characterization of G3BPs: Tissue specific expression, chromosomal localisation and rasGAP120 binding studies
2001
Long noncoding RNAs in mouse embryonic stem cell pluripotency and differentiation
2008
Isolation and characterization of a new nucleolar protein, Nrap, that is conserved from yeast to humans
2002
Cloning and expression analysis of a novel mouse gene with sequence similarity to the Drosophila fat facets gene
1997
Rankless by CCL
2026