Standout Papers

UCHIME improves sensitivity and speed of chimera detection 2011 2026 2016 2021 12.0k
  1. UCHIME improves sensitivity and speed of chimera detection (2011)
    R. C. Edgar, Brian J. Haas et al. Bioinformatics
  2. Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences (2013)
    Morgan G. I. Langille, Jesse Zaneveld et al. Nature Biotechnology
  3. The Impact of the Gut Microbiota on Human Health: An Integrative View (2012)
    José C. Clemente, Luke K. Ursell et al. Cell
  4. The Long-Term Stability of the Human Gut Microbiota (2013)
    Jeremiah J. Faith, Janaki L. Guruge et al. Science
  5. Diet Drives Convergence in Gut Microbiome Functions Across Mammalian Phylogeny and Within Humans (2011)
    Brian D. Muegge, Justin Kuczynski et al. Science
  6. The microbiome in early life: implications for health outcomes (2016)
    Sabrina Tamburini, Nan Shen et al. Nature Medicine
  7. Cohabiting family members share microbiota with one another and with their dogs (2013)
    Se Jin Song, Christian L. Lauber et al. eLife
  8. Partial restoration of the microbiota of cesarean-born infants via vaginal microbial transfer (2016)
    Maria Gloria Domínguez-Bello, Nan Shen et al. Nature Medicine
  9. The Biological Observation Matrix (BIOM) format or: how I learned to stop worrying and love the ome-ome (2012)
    Daniel McDonald, José C. Clemente et al. GigaScience
  10. Experimental and analytical tools for studying the human microbiome (2011)
    Justin Kuczynski, Christian L. Lauber et al. Nature Reviews Genetics
  11. Intestinal Microbiota Is Influenced by Gender and Body Mass Index (2016)
    Carmen Haro, Oriol Alberto Rangel-Zúñiga et al. PLoS ONE
  12. Enrichment of the lung microbiome with oral taxa is associated with lung inflammation of a Th17 phenotype (2016)
    Leopoldo N. Segal, José C. Clemente et al. Nature Microbiology
  13. Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences (2014)
    Jai Ram Rideout, Yan He et al. PeerJ
  14. The role of the gut microbiome in systemic inflammatory disease (2018)
    José C. Clemente, Julia Manasson et al. BMJ
  15. Reconstructing the Microbial Diversity and Function of Pre-Agricultural Tallgrass Prairie Soils in the United States (2013)
    Noah Fierer, Joshua Ladau et al. Science
  16. Specific Bacteria and Metabolites Associated With Response to Fecal Microbiota Transplantation in Patients With Ulcerative Colitis (2018)
    Sudarshan Paramsothy, Shaun Nielsen et al. Gastroenterology
  17. Subsistence strategies in traditional societies distinguish gut microbiomes (2015)
    Alexandra J. Obregón-Tito, Raúl Y. Tito et al. Nature Communications
  18. Bacteriome and Mycobiome Interactions Underscore Microbial Dysbiosis in Familial Crohn’s Disease (2016)
    Gautier Hoarau, Pranab K. Mukherjee et al. mBio
  19. Early-life gut microbiome composition and milk allergy resolution (2016)
    Supinda Bunyavanich, Nan Shen et al. Journal of Allergy and Clinical Immunology

Immediate Impact

83 from Science/Nature 162 standout
Sub-graph 1 of 11

Citing Papers

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37 intermediate papers

Works of José C. Clemente being referenced

Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
2013 Standout
The Long-Term Stability of the Human Gut Microbiota
2013 StandoutScience
and 10 more

Author Peers

Author Last Decade Papers Cites
José C. Clemente 21443 4792 2715 7930 131 37.3k
Dirk Gevers 25598 6258 4203 7264 94 41.4k
Catherine Lozupone 27665 5618 2641 12162 103 47.5k
Nicola Segata 21516 4971 3151 5089 194 32.8k
Patrick D. Schloss 22101 3757 2321 13734 196 43.0k
Mitchell L. Sogin 22592 3617 2125 15364 211 38.2k
Janet Jansson 15272 3532 1808 7452 222 27.5k
Dan Knights 19049 4467 2134 4106 122 28.6k
William Nelson 19191 3770 4092 5315 292 35.4k
J. Gregory Caporaso 27468 4260 2581 18178 122 55.7k
Micah Hamady 19159 3673 2091 7062 37 30.3k

All Works

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2026