Citation Impact
Citing Papers
Characterizing and explaining the impact of disease-associated mutations in proteins without known structures or structural homologs
2022 StandoutNobel
Deep learning with word embeddings improves biomedical named entity recognition
2017
Modeling polypharmacy side effects with graph convolutional networks
2018
Transfer learning for biomedical named entity recognition with neural networks
2018
BioBERT: a pre-trained biomedical language representation model for biomedical text mining
2019 Standout
The oxidative stress theory of disease: levels of evidence and epistemological aspects
2016
Protein oligomer modeling guided by predicted interchain contacts in CASP14
2021 StandoutNobel
Graph neural networks: A review of methods and applications
2020 Standout
An analysis of disease-gene relationship from Medline abstracts by DigSee
2017
Major advances in targeted protein degradation: PROTACs, LYTACs, and MADTACs
2021
Exploring the cellular basis of human disease through a large-scale mapping of deleterious genes to cell types
2015
Network-based prediction of protein interactions
2019
Inference and analysis of cell-cell communication using CellChat
2021 Standout
Prey for the Proteasome: Targeted Protein Degradation—A Medicinal Chemist's Perspective
2020
DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants
2016 Standout
The Vagus Nerve at the Interface of the Microbiota-Gut-Brain Axis
2018 Standout
SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor
2020 Standout
Digital twins to personalize medicine
2019
Where Is Current Research on Blockchain Technology?—A Systematic Review
2016 Standout
The role of B cells in atherosclerosis
2018
Do the Rich Get Richer? An Empirical Analysis of the Bitcoin Transaction Network
2014
Assortativity decreases the robustness of interdependent networks
2012
A paradigm shift in medicine: A comprehensive review of network-based approaches
2019
On the Clinical Pharmacology of Reactive Oxygen Species
2020
Pathway and network-based strategies to translate genetic discoveries into effective therapies
2016
A network integration approach for drug-target interaction prediction and computational drug repositioning from heterogeneous information
2017
Mutations at protein-protein interfaces: Small changes over big surfaces have large impacts on human health
2016
DNA damage response signaling pathways and targets for radiotherapy sensitization in cancer
2020
The changing landscape of atherosclerosis
2021 StandoutNature
The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible
2016 Standout
The Human Phenotype Ontology: Semantic Unification of Common and Rare Disease
2015
NRF2 and NF-қB interplay in cerebrovascular and neurodegenerative disorders: Molecular mechanisms and possible therapeutic approaches
2018 Standout
FunCoup 5: Functional Association Networks in All Domains of Life, Supporting Directed Links and Tissue-Specificity
2021
Mechanisms of NAFLD development and therapeutic strategies
2018 Standout
Targeted Degradation of SLC Transporters Reveals Amenability of Multi-Pass Transmembrane Proteins to Ligand-Induced Proteolysis
2020
Reactive oxygen species (ROS) as pleiotropic physiological signalling agents
2020 Standout
Multimodal biomedical AI
2022 Standout
Precision medicine in cardiology
2016
Immunopathology of multiple sclerosis
2015 Standout
Using Big Data to Discover Diagnostics and Therapeutics for Gastrointestinal and Liver Diseases
2016
Drug repurposing: progress, challenges and recommendations
2018 Standout
Rational discovery of molecular glue degraders via scalable chemical profiling
2020
Transcription Factor NRF2 as a Therapeutic Target for Chronic Diseases: A Systems Medicine Approach
2018 Standout
Phenotypic screening with target identification and validation in the discovery and development of E3 ligase modulators
2021
Quantification of network structural dissimilarities
2017
Network biology concepts in complex disease comorbidities
2016
The IBD interactome: an integrated view of aetiology, pathogenesis and therapy
2017
Activation of apoptosis signalling pathways by reactive oxygen species
2016 Standout
Uncovering disease mechanisms through network biology in the era of Next Generation Sequencing
2016
PROTAC targeted protein degraders: the past is prologue
2022 Standout
An unsupervised machine learning model for discovering latent infectious diseases using social media data
2016
Defining roles of specific reactive oxygen species (ROS) in cell biology and physiology
2022 Standout
A CATH domain functional family based approach to identify putative cancer driver genes and driver mutations
2019
Revolutionizing healthcare: the role of artificial intelligence in clinical practice
2023 Standout
Applications of machine learning in drug discovery and development
2019 Standout
Artificial Intelligence in Cardiology
2018 Standout
Therapeutic targeting of the NRF2 and KEAP1 partnership in chronic diseases
2019 Standout
Network propagation: a universal amplifier of genetic associations
2017
Deep learning in bioinformatics: Introduction, application, and perspective in the big data era
2019
Review of deep learning: concepts, CNN architectures, challenges, applications, future directions
2021 Standout
ClinVar: public archive of interpretations of clinically relevant variants
2015 Standout
The pathogen Moniliophthora perniciosa promotes differential proteomic modulation of cacao genotypes with contrasting resistance to witches´ broom disease
2020 Standout
Systematic interrogation of diverse Omic data reveals interpretable, robust, and generalizable transcriptomic features of clinically successful therapeutic targets
2018
Acute BAF perturbation causes immediate changes in chromatin accessibility
2021
Reactive Oxygen Comes of Age: Mechanism-Based Therapy of Diabetic End-Organ Damage
2019
Degradation from the outside in: Targeting extracellular and membrane proteins for degradation through the endolysosomal pathway
2021 StandoutNobel
Transforming targeted cancer therapy with PROTACs: A forward-looking perspective
2021
Large Scale Proteomic Data and Network-Based Systems Biology Approaches to Explore the Plant World
2018
Potential Biases in Machine Learning Algorithms Using Electronic Health Record Data
2018 Standout
A review of computational drug repurposing
2019
Genome-wide functional association networks: background, data & state-of-the-art resources
2019
Artificial intelligence in drug discovery and development
2020 Standout
Integrative methods for analyzing big data in precision medicine
2015
Multilayer networks
2014 Standout
CORUM: the comprehensive resource of mammalian protein complexes—2019
2018
UCSF ChimeraX: Meeting modern challenges in visualization and analysis
2017 Standout
Deep Learning on Graphs: A Survey
2020 Standout
2016 Standout
Transforming business using digital innovations: the application of AI, blockchain, cloud and data analytics
2020 Standout
The Chemistry of Reactive Oxygen Species (ROS) Revisited: Outlining Their Role in Biological Macromolecules (DNA, Lipids and Proteins) and Induced Pathologies
2021 Standout
g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update)
2019 Standout
Bitcoin and Beyond: A Technical Survey on Decentralized Digital Currencies
2016 Standout
The STRING database in 2023: protein–protein association networks and functional enrichment analyses for any sequenced genome of interest
2022 Standout
STRING v11: protein–protein association networks with increased coverage, supporting functional discovery in genome-wide experimental datasets
2018 Standout
eggNOG 5.0: a hierarchical, functionally and phylogenetically annotated orthology resource based on 5090 organisms and 2502 viruses
2018 Standout
Network Medicine Framework for Identifying Drug Repurposing Opportunities for COVID-19
2020
Predicting research trends with semantic and neural networks with an application in quantum physics
2020 StandoutNobel
Comparative analyses of population-scale phenomic data in electronic medical records reveal race-specific disease networks
2016
Biomarker definitions and their applications
2018 Standout
Industrializing AI-powered drug discovery: lessons learned from the Patrimony computing platform
2022
Predicting multicellular function through multi-layer tissue networks
2017
IID 2018 update: context-specific physical protein–protein interactions in human, model organisms and domesticated species
2018
Predicting Protein–Protein Interactions from the Molecular to the Proteome Level
2016
Chemical Inhibition of ENL/AF9 YEATS Domains in Acute Leukemia
2021 StandoutNobel
Bitcoin, Blockchain and Fintech: a systematic review and case studies in the supply chain
2019 Standout
Federated learning enabled digital twins for smart cities: Concepts, recent advances, and future directions
2022 Standout
WebGestalt 2019: gene set analysis toolkit with revamped UIs and APIs
2019 Standout
The STRING database in 2021: customizable protein–protein networks, and functional characterization of user-uploaded gene/measurement sets
2020 Standout
The Role of AI, Machine Learning, and Big Data in Digital Twinning: A Systematic Literature Review, Challenges, and Opportunities
2021 Standout
Characterization of clinical signs in the human interactome
2016
Works of Jörg Menche being referenced
Mapping the Human Kinome in Response to DNA Damage
2019
Endophenotype Network Models: Common Core of Complex Diseases
2016
Systematic characterization of BAF mutations provides insights into intracomplex synthetic lethalities in human cancers
2019
Asymptotic properties of degree-correlated scale-free networks
2010
Mapping the perturbome network of cellular perturbations
2019
Tissue Specificity of Human Disease Module
2016
Network-based in silico drug efficacy screening
2016
A DIseAse MOdule Detection (DIAMOnD) Algorithm Derived from a Systematic Analysis of Connectivity Patterns of Disease Proteins in the Human Interactome
2015
Plasticity of the Cullin-RING Ligase Repertoire Shapes Sensitivity to Ligand-Induced Protein Degradation
2019
A diseasome cluster-based drug repurposing of soluble guanylate cyclase activators from smooth muscle relaxation to direct neuroprotection
2018
Human symptoms–disease network
2014
Proximal Pathway Enrichment Analysis for Targeting Comorbid Diseases via Network Endopharmacology
2018
Uncovering disease-disease relationships through the incomplete interactome
2015 Science
Interactome-based approaches to human disease
2017
B Cell–Activating Factor Neutralization Aggravates Atherosclerosis
2018