Citation Impact
Citing Papers
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
2015 Standout
QUAST: quality assessment tool for genome assemblies
2013 Standout
A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae
2020 Standout
MetaBAT 2: an adaptive binning algorithm for robust and efficient genome reconstruction from metagenome assemblies
2019 Standout
The Pseudomonas aeruginosa accessory genome elements influence virulence towards Caenorhabditis elegans
2019 StandoutNobel
Insights from 20 years of bacterial genome sequencing
2015
Gut microbiome remodeling induces depressive-like behaviors through a pathway mediated by the host’s metabolism
2016 Standout
Improved metagenomic analysis with Kraken 2
2019 Standout
Kraken: ultrafast metagenomic sequence classification using exact alignments
2014 Standout
High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries
2018 Standout
Understanding managers’ attitudes and behavioral intentions towards using artificial intelligence for organizational decision-making
2021 Standout
Genome sequence-based species delimitation with confidence intervals and improved distance functions
2013 Standout
An overview of clinical decision support systems: benefits, risks, and strategies for success
2020 Standout
Discovery of archaeal fusexins homologous to eukaryotic HAP2/GCS1 gamete fusion proteins
2022 StandoutNobel
Community-wide analysis of microbial genome sequence signatures
2009
Metagenomic microbial community profiling using unique clade-specific marker genes
2012
Exploring short k-mer profiles in cells and mobile elements from Archaea highlights the major influence of both the ecological niche and evolutionary history
2021
Melioidosis
2018 Standout
Changes of Intestinal Functions in Liver Cirrhosis
2016 Standout
The statistical-mechanics of chromosome conformation capture
2013
The Binning of Metagenomic Contigs for Microbial Physiology of Mixed Cultures
2012
Ecology and evolution of Mycobacterium tuberculosis
2018
New CRISPR–Cas systems from uncultivated microbes
2016 StandoutNatureNobel
Comparative genomics and functional analysis of niche-specific adaptation inPseudomonas putida
2010
A phylogenetic method to perform genome-wide association studies in microbes that accounts for population structure and recombination
2018
Spatial and temporal changes in cumulative human impacts on the world’s ocean
2015 Standout
GC-Content Evolution in Bacterial Genomes: The Biased Gene Conversion Hypothesis Expands
2015
Clustering metagenomic sequences with interpolated Markov models
2010
Complete nitrification by Nitrospira bacteria
2015 StandoutNature
Candidate Phyla Radiation Roizmanbacteria From Hot Springs Have Novel and Unexpectedly Abundant CRISPR-Cas Systems
2019 StandoutNobel
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy
2019 Standout
Factors that influence the implementation of e-health: a systematic review of systematic reviews (an update)
2016 Standout
Laboratory validation of a clinical metagenomic sequencing assay for pathogen detection in cerebrospinal fluid
2019
A large-scale evaluation of algorithms to calculate average nucleotide identity
2017 Standout
Binning metagenomic contigs by coverage and composition
2014 Standout
Genomic and Functional Characterization of Enterococcus faecalis Isolates Recovered From the International Space Station and Their Potential for Pathogenicity
2021 StandoutNobel
Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage
2013 StandoutNature
The Impact of eHealth on the Quality and Safety of Health Care: A Systematic Overview
2011 Standout
Clinical decision support software for management of chronic heart failure: Development and evaluation
2005
The Technology Acceptance Model: Its past and its future in health care
2009 Standout
Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences
2014 Standout
Concepts of the last eukaryotic common ancestor
2019
metaSPAdes: a new versatile metagenomic assembler
2017 Standout
Phylogenomic Study of Burkholderia glathei-like Organisms, Proposal of 13 Novel Burkholderia Species and Emended Descriptions of Burkholderia sordidicola, Burkholderia zhejiangensis, and Burkholderia grimmiae
2016
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads
2017 Standout
Development and Validation of a Clinical and Computerised Decision Support System for Management of Hypertension (DSS-HTN) at a Primary Health Care (PHC) Setting
2013
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
2015 Standout
Genome-Based Taxonomic Classification of the Phylum Actinobacteria
2018 Standout
OrthoANI: An improved algorithm and software for calculating average nucleotide identity
2015 Standout
Natural infection of Atlantic salmon (Salmo salar L.) with salmonid alphavirus 3 generates numerous viral deletion mutants
2013
Loss of Sendai virus C protein leads to accumulation of RIG-I immunostimulatory defective interfering RNA
2017 StandoutNobel
Using SPAdes De Novo Assembler
2020 Standout
Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
2018 Standout
Shifting the genomic gold standard for the prokaryotic species definition
2009 Standout
The Hidden World within Plants: Ecological and Evolutionary Considerations for Defining Functioning of Microbial Endophytes
2015 Standout
Risk assessment of the environmental impact of Norwegian Atlantic salmon farming
2014 Standout
Pangenomic Approach To Understanding Microbial Adaptations within a Model Built Environment, the International Space Station, Relative to Human Hosts and Soil
2019
Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
2014 Standout
MEGAHIT: an ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph
2015 Standout
Clinical, Environmental, and Serologic Surveillance Studies of Melioidosis in Gabon, 2012–2013
2014
Evaluation of Effectiveness and Cost‐Effectiveness of a Clinical Decision Support System in Managing Hypertension in Resource Constrained Primary Health Care Settings: Results From a Cluster Randomized Trial
2015
3D imaging of Sox2 enhancer clusters in embryonic stem cells
2014 StandoutNobel
Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies
2016 Standout
The commensal microbiome is associated with anti–PD-1 efficacy in metastatic melanoma patients
2018 StandoutScience
The Placenta Harbors a Unique Microbiome
2014 Standout
Factors influencing decision support system acceptance
2012
The First Microbial Colonizers of the Human Gut: Composition, Activities, and Health Implications of the Infant Gut Microbiota
2017 Standout
MaxBin 2.0: an automated binning algorithm to recover genomes from multiple metagenomic datasets
2015 Standout
Alcoholic Liver Disease: The Gut Microbiome and Liver Cross Talk
2015
Cardiovascular Diseases in India
2016 Standout
Changing state of Arctic sea ice across all seasons
2018 Standout
Salmonid alphavirus (SAV)
2018
BinSanity: unsupervised clustering of environmental microbial assemblies using coverage and affinity propagation
2017
Costs and Benefits of Health Information Technology
2006 Standout
Ecological Consequences of Sea-Ice Decline
2013 Science
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison
2015 Standout
Works of Jon Bohlin being referenced
Rapid scoring of genes in microbial pan-genome-wide association studies with Scoary
2016
Reliability and applications of statistical methods based on oligonucleotide frequencies in bacterial and archaeal genomes
2008
Veillonella, Firmicutes: Microbes disguised as Gram negatives
2013
Modeling of the GC content of the substituted bases in bacterial core genomes
2018
Investigations of Oligonucleotide Usage Variance Within and Between Prokaryotes
2008
Analysis of genomic signatures in prokaryotes using multinomial regression and hierarchical clustering
2009
Analysis of intra-genomic GC content homogeneity within prokaryotes
2010
The nucleotide composition of microbial genomes indicates differential patterns of selection on core and accessory genomes
2017
Genomic comparisons of Brucella spp. and closely related bacteria using base compositional and proteome based methods
2010
Evaluation of a computer‐based decision support system for treatment of hypertension with drugs: retrospective, nonintervention testing of cost and guideline adherence
2000
Molecular epidemiology of salmonid alphavirus (SAV) subtype 3 in Norway
2010
RABIES IN THE ARCTIC FOX POPULATION, SVALBARD, NORWAY
2011
The Genus <i>Burkholderia</i>: Analysis of 56 Genomic Sequences
2009
Armed conflict and population displacement as drivers of the evolution and dispersal of Mycobacterium tuberculosis
2016