Citation Impact
Citing Papers
Emergence of the universal genetic code imprinted in an RNA record
2006
Atomic-Level Characterization of the Structural Dynamics of Proteins
2010 StandoutScienceNobel
Directed Evolution Mimics Allosteric Activation by Stepwise Tuning of the Conformational Ensemble
2018 StandoutNobel
The Human SepSecS-tRNA Sec Complex Reveals the Mechanism of Selenocysteine Formation
2009 StandoutScienceNobel
The Crystal Structure of the Ribosome Bound to EF-Tu and Aminoacyl-tRNA
2009 StandoutScienceNobel
Incorporation of sensing modalities into de novo designed fluorescence-activating proteins
2021 StandoutNobel
De novo design of allosterically switchable protein assemblies
2024 StandoutNatureNobel
Soft corrugated channel with synergistic exclusive discrimination gating for CO2 recognition in gas mixture
2023 StandoutNobel
Theoretical and Computational Investigation of Flagellin Translocation and Bacterial Flagellum Growth
2011
QM/MM Methods for Biomolecular Systems
2009 Standout
EttA regulates translation by binding the ribosomal E site and restricting ribosome-tRNA dynamics
2014 StandoutNobel
NAMD goes quantum: an integrative suite for hybrid simulations
2018
The ensemble nature of allostery
2014 Nature
On the Interpretation of Force-Induced Unfolding Studies of Membrane Proteins Using Fast Simulations
2019 StandoutNobel
Post-transcriptional gene regulation by mRNA modifications
2016 Standout
Atomic-accuracy models from 4.5-Å cryo-electron microscopy data with density-guided iterative local refinement
2015 StandoutNobel
Induced fit, conformational selection and independent dynamic segments: an extended view of binding events
2010
Evolution of dynamical networks enhances catalysis in a designer enzyme
2021
The road to fully programmable protein catalysis
2022 StandoutNatureNobel
Mechanics of Force Propagation in TonB-Dependent Outer Membrane Transport
2007
Hierarchical Modeling of Activation Mechanisms in the ABL and EGFR Kinase Domains: Thermodynamic and Mechanistic Catalysts of Kinase Activation by Cancer Mutations
2009
What recent ribosome structures have revealed about the mechanism of translation
2009 StandoutNatureNobel
Whither Ribosome Structure and Dynamics Research? (A Perspective)
2016 StandoutNobel
Molecular Dynamics Simulation for All
2018 Standout
Force Field Bias in Protein Folding Simulations
2009
Molecular dynamics of EF‐G during translocation
2011 StandoutNobel
Mechanism of tetracycline resistance by ribosomal protection protein Tet(O)
2013 StandoutNobel
Structural insights into cognate versus near‐cognate discrimination during decoding
2011 StandoutNobel
Conformational landscapes of membrane proteins delineated by enhanced sampling molecular dynamics simulations
2017
Nascent peptide assists the ribosome in recognizing chemically distinct small molecules
2016
Selective stalling of human translation through small-molecule engagement of the ribosome nascent chain
2017 StandoutNobel
Structure of the mammalian ribosomal pre-termination complex associated with eRF1•eRF3•GDPNP
2013 StandoutNobel
The ABC-F protein EttA gates ribosome entry into the translation elongation cycle
2014 StandoutNobel
A Cell-Penetrating Scorpion Toxin Enables Mode-Specific Modulation of TRPA1 and Pain
2019 StandoutNobel
Revealing Atomic-Level Mechanisms of Protein Allostery with Molecular Dynamics Simulations
2016
Oncogenic Mutations Counteract Intrinsic Disorder in the EGFR Kinase and Promote Receptor Dimerization
2012 StandoutNobel
Advances in the field of single-particle cryo-electron microscopy over the last decade
2017 StandoutNobel
Intrinsically disordered proteins in cellular signalling and regulation
2014 Standout
Structure of EF-G–ribosome complex in a pretranslocation state
2013
Integrating protein structural dynamics and evolutionary analysis with Bio3D
2014
Molecular dynamics flexible fitting: A practical guide to combine cryo-electron microscopy and X-ray crystallography
2009
Capturing Transition Paths and Transition States for Conformational Rearrangements in the Ribosome
2014
Energy barriers and driving forces in tRNA translocation through the ribosome
2013
Dynamic contact network between ribosomal subunits enables rapid large-scale rotation during spontaneous translocation
2015
Transfer RNA–mediated regulation of ribosome dynamics during protein synthesis
2011
Structural insights into RNA-dependent eukaryal and archaeal selenocysteine formation
2007
Native structure of photosystem II at 1.95 Å resolution viewed by femtosecond X-ray pulses
2014 StandoutNature
CasX enzymes comprise a distinct family of RNA-guided genome editors
2019 StandoutNatureNobel
PcrA Helicase, a Prototype ATP-Driven Molecular Motor
2006
Using Molecular Simulation to Model High-Resolution Cryo-EM Reconstructions
2015
The role of protein dynamics in the evolution of new enzyme function
2016
Regulation of the Protein-Conducting Channel by a Bound Ribosome
2009
How antibiotics kill bacteria: from targets to networks
2010 Standout
Connecting the Kinetics and Energy Landscape of tRNA Translocation on the Ribosome
2013
Structure and Dynamics of a Processive Brownian Motor: The Translating Ribosome
2010 StandoutNobel
Allosteric pathways in imidazole glycerol phosphate synthase
2012
Structural characterization of mRNA-tRNA translocation intermediates
2012 StandoutNobel
Converting structural information into an allosteric-energy-based picture for elongation factor Tu activation by the ribosome
2011 StandoutNobel
The ORCA quantum chemistry program package
2020 Standout
Ribosome-induced changes in elongation factor Tu conformation control GTP hydrolysis
2009 StandoutNobel
Quantitative Connection between Ensemble Thermodynamics and Single-Molecule Kinetics: A Case Study Using Cryogenic Electron Microscopy and Single-Molecule Fluorescence Resonance Energy Transfer Investigations of the Ribosome
2015 StandoutNobel
Activation of GTP hydrolysis in mRNA-tRNA translocation by elongation factor G
2015 StandoutNobel
Molecular signatures of ribosomal evolution
2008
RNA-dependent conversion of phosphoserine forms selenocysteine in eukaryotes and archaea
2006
Probing the SecYEG translocation pore size with preproteins conjugated with sizable rigid spherical molecules
2011 StandoutNobel
Structure of pyrrolysyl-tRNA synthetase, an archaeal enzyme for genetic code innovation
2007 StandoutNobel
Structural Determinants of Lateral Gate Opening in the Protein Translocon
2007
Trajectories of the ribosome as a Brownian nanomachine
2014 StandoutNobel
Biosynthesis and Function of Posttranscriptional Modifications of Transfer RNAs
2012
Simulating movement of tRNA through the ribosome during hybrid-state formation
2013
Controlling Allosteric Networks in Proteins
2016
A Panel of TrpB Biocatalysts Derived from Tryptophan Synthase through the Transfer of Mutations that Mimic Allosteric Activation
2016 StandoutNobel
Cryo-EM structure of the mammalian eukaryotic release factor eRF1–eRF3-associated termination complex
2012 StandoutNobel
Theoretical Evaluation of Structural Models of the S2 State in the Oxygen Evolving Complex of Photosystem II: Protonation States and Magnetic Interactions
2011
Cryoelectron microscopy structures of the ribosome complex in intermediate states during tRNA translocation
2011 StandoutNobel
The translation elongation cycle—capturing multiple states by cryo-electron microscopy
2017 StandoutNobel
Structural insight into TRPV5 channel function and modulation
2019 StandoutNobel
Allosteric Modulation of Substrate Binding within a Tetracationic Molecular Receptor
2015 StandoutNobel
Toward understanding phosphoseryl-tRNA Cys formation: The crystal structure of Methanococcus maripaludis phosphoseryl-tRNA synthetase
2007 StandoutNobel
Single‐molecule imaging reveals the translocation and DNA looping dynamics of hepatitis C virus NS3 helicase
2017 StandoutNobel
Quantitative Characterization of Domain Motions in Molecular Machines
2017 StandoutNobel
Protein Allostery and Conformational Dynamics
2016
On the energetics of translocon-assisted insertion of charged transmembrane helices into membranes
2010 StandoutNobel
Comparative sequence analysis suggests a conserved gating mechanism for TRP channels
2015
Works of John Eargle being referenced
MultiSeq: unifying sequence and structure data for evolutionary analysis
2006
Exit Strategies for Charged tRNA from GluRS
2010
Experimental and computational determination of tRNA dynamics
2009
Dynamics of Recognition between tRNA and Elongation Factor Tu
2008
The Role of L1 Stalk–tRNA Interaction in the Ribosome Elongation Cycle
2010
Functional Role of Ribosomal Signatures
2010
Exploring Residue Component Contributions to Dynamical Network Models of Allostery
2012
Assembly of the Five-Way Junction in the Ribosomal Small Subunit Using Hybrid MD-Go Simulations
2012
Dynamical networks in tRNA:protein complexes
2009
Multiple Alignment of protein structures and sequences for VMD
2005