Citation Impact

Citing Papers

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
2009 Standout
Pyrosequencing enumerates and contrasts soil microbial diversity
2007
The biomass distribution on Earth
2018 Standout
Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic “supergroups”
2009 Standout
Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample
2010 Standout
Sex Differences in the Gut Microbiome Drive Hormone-Dependent Regulation of Autoimmunity
2013 StandoutScience
Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate
2013 Standout
Deciphering the Rhizosphere Microbiome for Disease-Suppressive Bacteria
2011 StandoutScience
Impact of diet in shaping gut microbiota revealed by a comparative study in children from Europe and rural Africa
2010 Standout
Obesity alters gut microbial ecology
2005 Standout
Hypoxia and intra-complex genetic suppressors rescue complex I mutants by a shared mechanism
2024 StandoutNobel
A core gut microbiome in obese and lean twins
2008 StandoutNature
Estimating terrestrial biodiversity through extrapolation
1994 Standout
Comparative Analysis of Pyrosequencing and a Phylogenetic Microarray for Exploring Microbial Community Structures in the Human Distal Intestine
2009
Incorporating 16S Gene Copy Number Information Improves Estimates of Microbial Diversity and Abundance
2012
A C. elegans genome-scale microRNA network contains composite feedback motifs with high flux capacity
2008 StandoutNobel
Linking bacterial identities and ecosystem processes: can ‘omic’ analyses be more than the sum of their parts?
2010
Mixture Models for Estimating the Size of a Closed Population When Capture Rates Vary among Individuals
2003
High-resolution cryo-electron microscopy structure of the Trypanosoma brucei ribosome
2013 StandoutNatureNobel
Obesity-induced gut microbial metabolite promotes liver cancer through senescence secretome
2013 StandoutNature
Lateral transfer of the gene for a widely used marker, α-tubulin, indicated by a multi-protein study of the phylogenetic position of Andalucia (Excavata)
2007
Toward a Census of Bacteria in Soil
2006
Dynamics and associations of microbial community types across the human body
2014 StandoutNature
Exploring the Sources of Bacterial Spoilers in Beefsteaks by Culture-Independent High-Throughput Sequencing
2013
Complete nitrification by Nitrospira bacteria
2015 StandoutNature
PhylOTU: A High-Throughput Procedure Quantifies Microbial Community Diversity and Resolves Novel Taxa from Metagenomic Data
2011
Application of quantitative real-time PCR for rapid identification of Bacteroides fragilis group and related organisms in human wound samples
2011
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
2013 Standout
Metagenomic biomarker discovery and explanation
2011 Standout
The Science of Antibiotic Discovery
2020 Standout
Defining the core Arabidopsis thaliana root microbiome
2012 StandoutNature
Comparative Analysis of Bacterial Communities in a Potato Field as Determined by Pyrosequencing
2011
Revealing structure and assembly cues for Arabidopsis root-inhabiting bacterial microbiota
2012 StandoutNature
SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
2007 Standout
The Impact of the Gut Microbiota on Human Health: An Integrative View
2012 Standout
Persistence of soil organic matter as an ecosystem property
2011 StandoutNature
Superspreading and the effect of individual variation on disease emergence
2005 StandoutNature
Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing
2008
Microbiota Modulate Behavioral and Physiological Abnormalities Associated with Neurodevelopmental Disorders
2013 Standout
Pyrosequencing study of fecal microflora of autistic and control children
2010
The contentious nature of soil organic matter
2015 StandoutNature
Diversity, stability and resilience of the human gut microbiota
2012 StandoutNature
A 20-year retrospective review of global aquaculture
2021 StandoutNature
amoA ‐based consensus phylogeny of ammonia‐oxidizing archaea and deep sequencing of amoA genes from soils of four different geographic regions
2011
Topographic diversity of fungal and bacterial communities in human skin
2013 StandoutNature
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
2013 Standout
Efficient sampling algorithm for estimating subgraph concentrations and detecting network motifs
2004
New Genes for Male Accessory Gland Proteins in Drosophila melanogaster
1997
PCR Biases Distort Bacterial and Archaeal Community Structure in Pyrosequencing Datasets
2012
Belowground biodiversity and ecosystem functioning
2014 StandoutNature
What is the extent of prokaryotic diversity?
2006
Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation
2010 Standout
Nonparametric estimation of Shannon’s index of diversity when there are unseen species in sample
2003
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
2012 Standout
Serpin Structure, Mechanism, and Function
2002 Standout
Soil biodiversity and soil community composition determine ecosystem multifunctionality
2014 Standout
Microbial cell-envelope fragments and the formation of soil organic matter: a case study from a glacier forefield
2012
Assessing impacts of introduced aquaculture species on native fish communities: Nile tilapia and major carps in SE Asian freshwaters
2009
Naive Bayesian Classifier for Rapid Assignment of rRNA Sequences into the New Bacterial Taxonomy
2007 Standout
The species–accumulation curve and estimation of species richness
2003
Classification and quantification of bacteriophage taxa in human gut metagenomes
2014
A new statistical approach for assessing similarity of species composition with incidence and abundance data
2004 Standout
THE ANT FAUNA OF A TROPICAL RAIN FOREST: ESTIMATING SPECIES RICHNESS THREE DIFFERENT WAYS
2002
Succession of microbial consortia in the developing infant gut microbiome
2010 Standout
Decoupling function and taxonomy in the global ocean microbiome
2016 StandoutScience
Quantifying biodiversity: procedures and pitfalls in the measurement and comparison of species richness
2001 Standout
Negative Binomial Models for Abundance Estimation of Multiple Closed Populations
2001
INTERPOLATING, EXTRAPOLATING, AND COMPARING INCIDENCE-BASED SPECIES ACCUMULATION CURVES
2004 Standout
Biochemistry and Evolution of Anaerobic Energy Metabolism in Eukaryotes
2012
Microbial diversity in the deep sea and the underexplored “rare biosphere”
2006 Standout
Use of Ichip for High-Throughput In Situ Cultivation of “Uncultivable” Microbial Species
2010
The commensal microbiome is associated with anti–PD-1 efficacy in metastatic melanoma patients
2018 StandoutScience
The biodiversity of species and their rates of extinction, distribution, and protection
2014 StandoutScience
Identification of simple arylfluorosulfates as potent agents against resistant bacteria
2021 StandoutNobel
Real-Time PCR Quantitation of Clostridia in Feces of Autistic Children
2004
Toward defining the autoimmune microbiome for type 1 diabetes
2010
The ecology of the microbiome: Networks, competition, and stability
2015 StandoutScience
Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data
2009
The Microbial Engines That Drive Earth's Biogeochemical Cycles
2008 StandoutScience
Large variability of bathypelagic microbial eukaryotic communities across the world’s oceans
2015
An all-taxon microbial inventory of the Moorea coral reef ecosystem
2011
Microbial biodiversity in groundwater ecosystems
2008
Metagenomic and Small-Subunit rRNA Analyses Reveal the Genetic Diversity of Bacteria, Archaea, Fungi, and Viruses in Soil
2007
Eukaryotic microbes, principally fungi and labyrinthulomycetes, dominate biomass on bathypelagic marine snow
2016

Works of John Bunge being referenced

Predicting microbial species richness
2005
Protistan Diversity in the Arctic: A Case of Paleoclimate Shaping Modern Biodiversity?
2007
Parametric Models for Estimating the Number of Classes
2008
Estimating the Number of Species in a Stochastic Abundance Model
2002
Estimation of viral richness from shotgun metagenomes using a frequency count approach
2013
Protistan community patterns within the brine and halocline of deep hypersaline anoxic basins in the eastern Mediterranean Sea
2008
Microbial eukaryotes in the hypersaline anoxic L'Atalante deep‐sea basin
2008
ESTIMATING THE NUMBER OF SPECIES WITH CATCHALL
2010
Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness
2011
Synthetic Statistical Approach Reveals a High Degree of Richness of Microbial Eukaryotes in an Anoxic Water Column
2006
Estimating the Number of Species: A Review
1993
Comparison of three estimators of the number of species
1995
Bacterial diversity in a glacier foreland of the high Arctic
2010
Estimating the Number of Species: A Review
1993
Microeukaryote Community Patterns along an O2/H2S Gradient in a Supersulfidic Anoxic Fjord (Framvaren, Norway)
2006
Polymerase chain reaction primers miss half of rRNA microbial diversity
2009
Rankless by CCL
2026