Citation Impact
Citing Papers
Comprehensive single-cell transcriptional profiling of a multicellular organism
2017 Science
SMARTer single cell total RNA sequencing
2019
RNA splicing is a primary link between genetic variation and disease
2016 Science
The MR-Base platform supports systematic causal inference across the human phenome
2018 Standout
DoubletFinder: Doublet Detection in Single-Cell RNA Sequencing Data Using Artificial Nearest Neighbors
2019 Standout
Feature selection and dimension reduction for single-cell RNA-Seq based on a multinomial model
2019
Splatter: simulation of single-cell RNA sequencing data
2017
A survey of best practices for RNA-seq data analysis
2016 Standout
Correcting the Mean-Variance Dependency for Differential Variability Testing Using Single-Cell RNA Sequencing Data
2018
Inference and analysis of cell-cell communication using CellChat
2021 Standout
Human Stem Cell Resources Are an Inroad to Neandertal DNA Functions
2020 StandoutNobel
A general and flexible method for signal extraction from single-cell RNA-seq data
2018
High-throughput muscle fiber typing from RNA sequencing data
2022 StandoutNobel
An Expanded View of Complex Traits: From Polygenic to Omnigenic
2017 Standout
Determining cell type abundance and expression from bulk tissues with digital cytometry
2019 Standout
Cell Hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomics
2018
Systematic identification of genetic influences on methylation across the human life course
2016
Genetic effects on gene expression across human tissues
2017 StandoutNature
Fast, sensitive and accurate integration of single-cell data with Harmony
2019 Standout
Leveraging Polygenic Functional Enrichment to Improve GWAS Power
2018 Standout
Multiplexed droplet single-cell RNA-sequencing using natural genetic variation
2017
Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors
2018
Efficient integration of heterogeneous single-cell transcriptomes using Scanorama
2019
The Human Transcription Factors
2018 Standout
The changing landscape of atherosclerosis
2021 StandoutNature
Contrasting genetic architectures of schizophrenia and other complex diseases using fast variance-components analysis
2015
The role of regulatory variation in complex traits and disease
2015
Single-cell RNA sequencing: Technical advancements and biological applications
2017
Making sense of GWAS: using epigenomics and genome engineering to understand the functional relevance of SNPs in non-coding regions of the human genome
2015
Integrating single-cell transcriptomic data across different conditions, technologies, and species
2018 Standout
Impact of regulatory variation across human iPSCs and differentiated cells
2017
The single-cell transcriptional landscape of mammalian organogenesis
2019 StandoutNature
Normalization and variance stabilization of single-cell RNA-seq data using regularized negative binomial regression
2019 Standout
A test metric for assessing single-cell RNA-seq batch correction
2018
The Genetics of Transcription Factor DNA Binding Variation
2016
Efficient Integrative Multi-SNP Association Analysis via Deterministic Approximation of Posteriors
2016
Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage
2019 Standout
Fine-mapping cellular QTLs with RASQUAL and ATAC-seq
2015
Simultaneous epitope and transcriptome measurement in single cells
2017 Standout
The evolving tumor microenvironment: From cancer initiation to metastatic outgrowth
2023 Standout
Dictionary learning for integrative, multimodal and scalable single-cell analysis
2023 Standout
An xQTL map integrates the genetic architecture of the human brain's transcriptome and epigenome
2017
Functional mapping and annotation of genetic associations with FUMA
2017 Standout
scmap: projection of single-cell RNA-seq data across data sets
2018
10 Years of GWAS Discovery: Biology, Function, and Translation
2017 Standout
The biogenesis, biology and characterization of circular RNAs
2019 Standout
Associating cellular epigenetic models with human phenotypes
2017
Decomposing Cell Identity for Transfer Learning across Cellular Measurements, Platforms, Tissues, and Species
2019
Comprehensive Integration of Single-Cell Data
2019 Standout
Tumor Functional Heterogeneity Unraveled by scRNA-seq Technologies
2020
Organoid single-cell genomic atlas uncovers human-specific features of brain development
2019 StandoutNatureNobel
Manifold learning-based methods for analyzing single-cell RNA-sequencing data
2017
Missing data and technical variability in single-cell RNA-sequencing experiments
2017
Single Cell RNA Sequencing in Atherosclerosis Research
2020
Molecular QTL discovery incorporating genomic annotations using Bayesian false discovery rate control
2016
Religious Orders Study and Rush Memory and Aging Project
2018 Standout
Works of John Blischak being referenced
Methylation QTLs Are Associated with Coordinated Changes in Transcription Factor Binding, Histone Modifications, and Gene Expression Levels
2014
Batch effects and the effective design of single-cell gene expression studies
2017