Citation Impact
Citing Papers
Simplified and representative bacterial community of maize roots
2017
Potent CRISPR-Cas9 inhibitors from Staphylococcus genomes
2020 StandoutNobel
Structures of Cas9 Endonucleases Reveal RNA-Mediated Conformational Activation
2014 StandoutScienceNobel
BiG-SLiCE: A highly scalable tool maps the diversity of 1.2 million biosynthetic gene clusters
2021
Cross-talk between Akkermansia muciniphila and intestinal epithelium controls diet-induced obesity
2013 Standout
antiSMASH 6.0: improving cluster detection and comparison capabilities
2021 Standout
Machine learning predicts new anti-CRISPR proteins
2020 StandoutNobel
Roary: rapid large-scale prokaryote pan genome analysis
2015 Standout
A taxonomic note on the genus Lactobacillus: Description of 23 novel genera, emended description of the genus Lactobacillus Beijerinck 1901, and union of Lactobacillaceae and Leuconostocaceae
2020 Standout
Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation
2017 Science
The Pseudomonas aeruginosa accessory genome elements influence virulence towards Caenorhabditis elegans
2019 StandoutNobel
Inhibition of CRISPR-Cas9 ribonucleoprotein complex assembly by anti-CRISPR AcrIIC2
2019 StandoutNobel
Genome-based classification of micromonosporae with a focus on their biotechnological and ecological potential
2018
A cell-free platform for the prenylation of natural products and application to cannabinoid production
2019 StandoutNobel
antiSMASH 7.0: new and improved predictions for detection, regulation, chemical structures and visualisation
2023 Standout
Embracing the unknown: disentangling the complexities of the soil microbiome
2017 Standout
Taxon-specific aerosolization of bacteria and viruses in an experimental ocean-atmosphere mesocosm
2018
Comparative genomics: the bacterial pan-genome
2008
Occurrence of Corynebacterium striatum as an emerging antibiotic-resistant nosocomial pathogen in a Tunisian hospital
2017
Cpf1 Is a Single RNA-Guided Endonuclease of a Class 2 CRISPR-Cas System
2015 Standout
A New Perspective on Microbes Formerly Known as Nitrite-Oxidizing Bacteria
2016
The Genome of Akkermansia muciniphila, a Dedicated Intestinal Mucin Degrader, and Its Use in Exploring Intestinal Metagenomes
2011
Classification and evolution of type II CRISPR-Cas systems
2014 StandoutNobel
Precision microbiome reconstitution restores bile acid mediated resistance to Clostridium difficile
2014 StandoutNature
Plant–microbiome interactions: from community assembly to plant health
2020 Standout
Genome Features of the Endophytic Actinobacterium Micromonospora lupini Strain Lupac 08: On the Process of Adaptation to an Endophytic Life Style?
2014
RNA-based recognition and targeting: sowing the seeds of specificity
2017 StandoutNobel
New CRISPR–Cas systems from uncultivated microbes
2016 StandoutNatureNobel
Optimization of Δ 9 -tetrahydrocannabinolic acid synthase production in Komagataella phaffii via post-translational bottleneck identification
2018
antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters
2015 Standout
Ten years of pan-genome analyses
2014
RNA Targeting by Functionally Orthogonal Type VI-A CRISPR-Cas Enzymes
2017 StandoutNobel
Capture and visualization of live Mycobacterium tuberculosis bacilli from tuberculosis patient bioaerosols
2021 StandoutNobel
Bacterial genome sequencing in clinical microbiology: a pathogen-oriented review
2017
Comparisons of Subgingival Microbial Profiles of Refractory Periodontitis, Severe Periodontitis, and Periodontal Health Using the Human Oral Microbe Identification Microarray
2009
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy
2019 Standout
Processing-Independent CRISPR RNAs Limit Natural Transformation in Neisseria meningitidis
2013
Differential abundance analysis for microbial marker-gene surveys
2013 Standout
Diet–microbiota interactions as moderators of human metabolism
2016 StandoutNature
Insights into Secondary Metabolism from a Global Analysis of Prokaryotic Biosynthetic Gene Clusters
2014
DNA and RNA interference mechanisms by CRISPR-Cas surveillance complexes
2015 StandoutNobel
The Genus Lactobacillus: A Taxonomic Update
2012
The pangenome of an agronomically important crop plant Brassica oleracea
2016 Standout
Detecting Sequence Homology at the Gene Cluster Level with MultiGeneBlast
2013
Broad-host-range IncP-1 plasmids and their resistance potential
2013
Genome engineering using the CRISPR-Cas9 system
2013 Standout
Development and Applications of CRISPR-Cas9 for Genome Engineering
2014 Standout
Lifestyles of sourdough lactobacilli – Do they matter for microbial ecology and bread quality?
2018
A thermostable Cas9 with increased lifetime in human plasma
2017 StandoutNobel
Broad-spectrum enzymatic inhibition of CRISPR-Cas12a
2019 StandoutNobel
Implant infections: adhesion, biofilm formation and immune evasion
2018 Standout
Biology and Applications of CRISPR Systems: Harnessing Nature’s Toolbox for Genome Engineering
2016 StandoutNobel
Biogenesis pathways of RNA guides in archaeal and bacterial CRISPR-Cas adaptive immunity
2015 StandoutNobel
Lifestyles in transition: evolution and natural history of the genus Lactobacillus
2017
The Biology of CRISPR-Cas: Backward and Forward
2018 StandoutNobel
CRISPR-Mediated Modular RNA-Guided Regulation of Transcription in Eukaryotes
2013 StandoutNobel
The contribution of Pseudomonas aeruginosa virulence factors and host factors in the establishment of urinary tract infections
2017
Genome-Based Taxonomic Classification of the Phylum Actinobacteria
2018 Standout
The microbial nitrogen-cycling network
2018 Standout
Gut microbiota in human metabolic health and disease
2020 Standout
The human skin microbiome
2018 Standout
Mobile Genetic Elements Associated with Antimicrobial Resistance
2018 Standout
Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
2018 Standout
Cas-OFFinder: a fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases
2014 Standout
Diversity and Global Distribution of IncL/M Plasmids Enabling Horizontal Dissemination ofβ-Lactam Resistance Genes among the Enterobacteriaceae
2015
De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds
2017 StandoutScience
Systematic discovery of natural CRISPR-Cas12a inhibitors
2018 StandoutScienceNobel
Small molecules from the human microbiota
2015 Science
Lactobacillus enshiensis sp. nov., a novel arsenic-resistant bacterium
2020
Evaluation of DISCOVAR de novo using a mosquito sample for cost-effective short-read genome assembly
2016
CRISPR-Cas: biology, mechanisms and relevance
2016 StandoutNobel
The evolution of ecological facilitation within mixed-species biofilms in the mouse gastrointestinal tract
2018
What would it take for renewably powered electrosynthesis to displace petrochemical processes?
2019 StandoutScience
Corynebacterium accolens Releases Antipneumococcal Free Fatty Acids from Human Nostril and Skin Surface Triacylglycerols
2016
Lactobacillus huachuanensis sp. nov., isolated from Chinese traditional pickle
2019
Origin and Evolution of the Kiwifruit Canker Pandemic
2017
Characterization of a Novel Putative Xer-Dependent Integrative Mobile Element Carrying the bla NMC-A Carbapenemase Gene, Inserted into the Chromosome of Members of the Enterobacter cloacae Complex
2015
Phylogeny of Cas9 determines functional exchangeability of dual-RNA and Cas9 among orthologous type II CRISPR-Cas systems
2013 StandoutNobel
bcgTree: automatized phylogenetic tree building from bacterial core genomes
2016
Intraspecies Transfer of the Chromosomal Acinetobacter baumannii bla NDM-1 Carbapenemase Gene
2016
Discovery of widespread type I and type V CRISPR-Cas inhibitors
2018 Science
Acinetobacter baumannii: evolution of a global pathogen
2013
Emended description of Mycobacterium abscessus, Mycobacterium abscessus subsp. abscessus and Mycobacterium abscessus subsp. bolletii and designation of Mycobacterium abscessus subsp. massiliense comb. nov.
2016
Phylogenomics and comparative genomics of Lactobacillus salivarius, a mammalian gut commensal
2017
Antimicrobial Resistance in ESKAPE Pathogens
2020 Standout
CUSHAW: a CUDA compatible short read aligner to large genomes based on the Burrows–Wheeler transform
2012
antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline
2019 Standout
Works of Jochen Blom being referenced
Whole-genome comparison of disease and carriage strains provides insights into virulence evolution in Neisseria meningitidis
2008
Comparative genomics of Lactobacillus
2010
Analysis of the Genome and Metabolome of Marine Myxobacteria Reveals High Potential for Biosynthesis of Novel Specialized Metabolites
2018
Polymyxin P is the active principle in suppressing phytopathogenic Erwinia spp. by the biocontrol rhizobacterium Paenibacillus polymyxa M-1
2013
Large genomic differences between Moraxella bovoculi isolates acquired from the eyes of cattle with infectious bovine keratoconjunctivitis versus the deep nasopharynx of asymptomatic cattle
2016
Complete genome sequence of Saccharothrix espanaensis DSM 44229T and comparison to the other completely sequenced Pseudonocardiaceae
2012
Complete genome sequence, lifestyle, and multi-drug resistance of the human pathogen Corynebacterium resistens DSM 45100 isolated from blood samples of a leukemia patient
2012
Next-generation systematics: An innovative approach to resolve the structure of complex prokaryotic taxa
2016
Ultrafast pyrosequencing of Corynebacterium kroppenstedtii DSM44385 revealed insights into the physiology of a lipophilic corynebacterium that lacks mycolic acids
2008
Identification and Characterization of Microcin S, a New Antibacterial Peptide Produced by Probiotic Escherichia coli G3/10
2012
Complete Genome Sequence of the Fire Blight Pathogen Erwinia amylovora CFBP 1430 and Comparison to Other Erwinia spp.
2010
Comparative Genomics of 12 Strains of Erwinia amylovora Identifies a Pan-Genome with a Large Conserved Core
2013
Complete genome sequencing of Agrobacterium sp. H13-3, the former Rhizobium lupini H13-3, reveals a tripartite genome consisting of a circular and a linear chromosome and an accessory plasmid but lacking a tumor-inducing Ti-plasmid
2011
Whole Genome Sequencing versus Traditional Genotyping for Investigation of a Mycobacterium tuberculosis Outbreak: A Longitudinal Molecular Epidemiological Study
2013
EDGAR: A software framework for the comparative analysis of prokaryotic genomes
2009
Sequencing and comparative analysis of IncP-1α antibiotic resistance plasmids reveal a highly conserved backbone and differences within accessory regions
2010
The genomics of Acinetobacter baumannii: Insights into genome plasticity, antimicrobial resistance and pathogenicity
2011
Genome sequence of B. amyloliquefaciens type strain DSM7T reveals differences to plant-associated B. amyloliquefaciens FZB42
2011
Lautropia mirabilis gen. nov., sp. nov., a Gram-negative motile coccus with unusual morphology isolated from the human mouth
1994
Virulence Evolution of the Human Pathogen Neisseria meningitidis by Recombination in the Core and Accessory Genome
2011
Lactobacillus suantsaii sp. nov., isolated from suan-tsai, a traditional Taiwanese fermented mustard green
2019
Experimental Evaluation of Host Adaptation of Lactobacillus reuteri to Different Vertebrate Species
2017
Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programming
2011
Diversification and niche adaptations of Nitrospina-like bacteria in the polyextreme interfaces of Red Sea brines
2015
Genome Sequence of the Small-Colony Variant Pseudomonas aeruginosa MH27, Isolated from a Chronic Urethral Catheter Infection
2014
Insights into the completely annotated genome of Lactobacillus buchneri CD034, a strain isolated from stable grass silage
2012