Citation Impact

Citing Papers

Six-rowed barley originated from a mutation in a homeodomain-leucine zipper I-class homeobox gene
2007 Standout
Positional cloning of the wheat vernalization gene VRN1
2003 Standout
Comparative Analysis of the Receptor-Like Kinase Family in Arabidopsis and Rice[W]
2004 Standout
Analytical methods for inferring functional effects of single base pair substitutions in human cancers
2009
Genetic manipulation of Patescibacteria provides mechanistic insights into microbial dark matter and the epibiotic lifestyle
2023 StandoutNobel
An integrated map of genetic variation from 1,092 human genomes
2012 StandoutNature
The Human Gene Mutation Database: building a comprehensive mutation repository for clinical and molecular genetics, diagnostic testing and personalized genomic medicine
2013
DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants
2016 Standout
The advantages and disadvantages of being polyploid
2005 Standout
Rewiring of the Fruit Metabolome in Tomato Breeding
2018 Standout
ROS signaling: the new wave?
2011 Standout
ACMG clinical laboratory standards for next-generation sequencing
2013
Going back to the roots: the microbial ecology of the rhizosphere
2013 Standout
Fungal endophytes: diversity and functional roles
2009 Standout
Predicting the clinical impact of human mutation with deep neural networks
2018
The anthocyanin reduced Tomato Mutant Demonstrates the Role of Flavonols in Tomato Lateral Root and Root Hair Development
2014
Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology
2015 Standout
Crop microbiome and sustainable agriculture
2020 Standout
W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis
2016 Standout
An informatics approach to analyzing the incidentalome
2012
A new cacao linkage map based on codominant markers: development and integration of 201 new microsatellite markers
2004
CD-HIT: accelerated for clustering the next-generation sequencing data
2012 Standout
Five Years of GWAS Discovery
2012 Standout
Predicting the sequence specificities of DNA- and RNA-binding proteins by deep learning
2015 Standout
A Whole-Genome Analysis Framework for Effective Identification of Pathogenic Regulatory Variants in Mendelian Disease
2016
The Human Phenotype Ontology: Semantic Unification of Common and Rare Disease
2015
Arabidopsis and the plant immune system
2010
Mitochondrial dysfunction induces RNA interference in C. elegans through a pathway homologous to the mammalian RIG-I antiviral response
2020 StandoutNobel
Mitochondria: In Sickness and in Health
2012 Standout
Short Tree, Long Tree, Right Tree, Wrong Tree: New Acquisition Bias Corrections for Inferring SNP Phylogenies
2015
High-performance medicine: the convergence of human and artificial intelligence
2018 Standout
LTR retrotransposons and flowering plant genome size: emergence of the increase/decrease model
2005
Drug development in the era of precision medicine
2017
RNA interference-mediated antiviral defense in insects
2015 Nobel
Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection
2010 Standout
Ancestral polyploidy in seed plants and angiosperms
2011 StandoutNature
Research priorities for harnessing plant microbiomes in sustainable agriculture
2017
Global aetiology and epidemiology of type 2 diabetes mellitus and its complications
2017 Standout
Mutation of the Mg2+ Transporter SLC41A1 Results in a Nephronophthisis-Like Phenotype
2013
Cystic fibrosis genetics: from molecular understanding to clinical application
2014 Standout
ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids
2010 Standout
Exome sequencing as a tool for Mendelian disease gene discovery
2011
Convergent functional genomics of genome‐wide association data for bipolar disorder: Comprehensive identification of candidate genes, pathways and mechanisms
2008
Brefeldin A production by Phoma medicaginis in dead pre-colonized plant tissue: a strategy for habitat conquest?
2004
Metabolite-based genome-wide association studies in plants
2015
HYBRID SPECIATION AND INDEPENDENT EVOLUTION IN LINEAGES OF ALPINE BUTTERFLIES
2012
Seed dormancy and the control of germination
2006 Standout
Coming of age: ten years of next-generation sequencing technologies
2016 Standout
Sensitive protein alignments at tree-of-life scale using DIAMOND
2021 Standout
Geographic and Genetic Population Differentiation of the Amazonian Chocolate Tree (Theobroma cacao L)
2008 Standout
Annotating DNA Variants Is the Next Major Goal for Human Genetics
2014
Genomic instability — an evolving hallmark of cancer
2010 Standout
LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons
2007 Standout
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
2010 Standout
Dynamic of the genetic structure of bacterial and fungal communities at different developmental stages of Medicago truncatula Gaertn. cv. Jemalong line J5
2006
The Pfam protein families database
2011 Standout
ClinGen — The Clinical Genome Resource
2015
ClinVar: public archive of interpretations of clinically relevant variants
2015 Standout
Diabetes and its comorbidities—where East meets West
2013
Functional expression and characterization of the envelope glycoprotein E1E2 heterodimer of hepatitis C virus
2019 StandoutNobel
Role for protein–protein interaction databases in human genetics
2009
ToppGene Suite for gene list enrichment analysis and candidate gene prioritization
2009 Standout
CADD: predicting the deleteriousness of variants throughout the human genome
2018 Standout
LysM Domain Receptor Kinases Regulating Rhizobial Nod Factor-Induced Infection
2003 Science
Improving Protein Expression, Stability, and Function with ProteinMPNN
2024 StandoutNobel
Whole Genome Sequencing as a Diagnostic Test: Challenges and Opportunities
2013
CD-HIT Suite: a web server for clustering and comparing biological sequences
2010 Standout
Transcriptional control of flavonoid biosynthesis by MYB–bHLH–WDR complexes
2015 Standout
Magnesium in Man: Implications for Health and Disease
2014 Standout
Stacks: an analysis tool set for population genomics
2013 Standout
The genomic consequences of adaptive divergence and reproductive isolation between species of manakins
2013
Viral RNA Silencing Suppression: The Enigma of Bunyavirus NSs Proteins
2016
Population genomics based on low coverage sequencing: how low should we go?
2012
A Renaissance of Elicitors: Perception of Microbe-Associated Molecular Patterns and Danger Signals by Pattern-Recognition Receptors
2009 Standout
A sulfated metabolite produced bystf3negatively regulates the virulence ofMycobacteriumtuberculosis
2006 StandoutNobel
Widespread Paleopolyploidy in Model Plant Species Inferred from Age Distributions of Duplicate Genes[W]
2004
Genomic scan for single nucleotide polymorphisms reveals patterns of divergence and gene flow between ecologically divergent species
2012
Sensitivity of Brassica oleracea seed germination to hypoxia: A QTL analysis
2005
A bacterial artificial chromosome library for barley (Hordeum vulgare L.) and the identification of clones containing putative resistance genes
2000
Construction and characterization of a bacterial artificial chromosome (BAC) library for the A genome of wheat
1999
Highly Variable Patterns of Linkage Disequilibrium in Multiple Soybean Populations
2007
Reactive Oxygen Species (ROS)-Based Nanomedicine
2019 Standout
UniRef: comprehensive and non-redundant UniProt reference clusters
2007
Genomewide Association Studies and Assessment of the Risk of Disease
2010
Interferon-Stimulated Gene (ISG)-Expression Screening Reveals the Specific Antibunyaviral Activity of ISG20
2018 StandoutNobel
Molecular Diagnosis of Infantile Mitochondrial Disease with Targeted Next-Generation Sequencing
2012
The DisGeNET knowledge platform for disease genomics: 2019 update
2019 Standout
Large-scale determination of previously unsolved protein structures using evolutionary information
2015 StandoutNobel
Quantitative genetic analysis of seed vigour and pre‐emergence seedling growth traits in Brassica oleracea
2000
Accurate proteome-wide missense variant effect prediction with AlphaMissense
2023 StandoutScienceNobel

Works of Joann Mudge being referenced

Genome‐wide association genetics of an adaptive trait in lodgepole pine
2012
Legume genomes: more than peas in a pod
2003
Genome-wide association studies: progress and potential for drug discovery and development
2008
Comparative genomic analysis of sequences sampled from a small region on soybean (Glycine max) molecular linkage group G
2002
Estimates of conserved microsynteny among the genomes of Glycine max, Medicago truncatula and Arabidopsis thaliana
2003
Transcriptome profiling of cytokinin and auxin regulation in tomato root
2013
Candidate Genes and Genetic Architecture of Symbiotic and Agronomic Traits Revealed by Whole-Genome, Sequence-Based Association Genetics in Medicago truncatula
2013
C6/36 Aedes albopictus Cells Have a Dysfunctional Antiviral RNA Interference Response
2010
Highly syntenic regions in the genomes of soybean, Medicago truncatula, and Arabidopsis thaliana
2005
Genome-wide association studies: progress in identifying genetic biomarkers in common, complex diseases.
2007
Genome-Wide Association Studies: Progress in Identifying Genetic Biomarkers in Common, Complex Diseases
2007
Phylogenetic Signal Variation in the Genomes of Medicago (Fabaceae)
2013
Two simple sequence repeat markers to select for soybean cyst nematode resistance coditioned by the rhg1 locus
1999
Targeted isolation of simple sequence repeat markers through the use of bacterial artificial chromosomes
1999
High‐density genome‐wide association mapping implicates an F‐box encoding gene in Medicago truncatula resistance to Aphanomyces euteiches
2013
Carrier Testing for Severe Childhood Recessive Diseases by Next-Generation Sequencing
2011
A bacterial artificial chromosome library for soybean and identification of clones near a major cyst nematode resistance gene
1998
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