Standout Papers
Citation Impact
Citing Papers
Supervised Risk Predictor of Breast Cancer Based on Intrinsic Subtypes
2009 Standout
Recruitment of Mec1 and Ddc1 Checkpoint Proteins to Double-Strand Breaks Through Distinct Mechanisms
2001 Science
Loading of the human 9-1-1 checkpoint complex onto DNA by the checkpoint clamp loader hRad17-replication factor C complex in vitro
2003 StandoutNobel
A 50-Gene Intrinsic Subtype Classifier for Prognosis and Prediction of Benefit from Adjuvant Tamoxifen
2012
Robustness, scalability, and integration of a wound-response gene expression signature in predicting breast cancer survival
2005
High Frequency of TP53 Mutation in BRCA1 and Sporadic Basal-like Carcinomas but not in BRCA1 Luminal Breast Tumors
2009
An expression signature for p53 status in human breast cancer predicts mutation status, transcriptional effects, and patient survival
2005
Functional Genomic Analysis of RNA Interference in C. elegans
2005 StandoutScienceNobel
Epithelial-Mesenchymal Transition in Breast Cancer Relates to the Basal-like Phenotype
2008
Descriptive analysis of estrogen receptor (ER)‐negative, progesterone receptor (PR)‐negative, and HER2‐negative invasive breast cancer, the so‐called triple‐negative phenotype
2007 Standout
Molecular Stratification of Triple-Negative Breast Cancers
2011
Basal-like breast carcinomas: clinical outcome and response to chemotherapy
2006
Hypoxia-inducible factors and RAB22A mediate formation of microvesicles that stimulate breast cancer invasion and metastasis
2014 StandoutNobel
Frequent PTEN genomic alterations and activated phosphatidylinositol 3-kinase pathway in basal-like breast cancer cells
2008
Triple negative breast cancer: unmet medical needs
2010
Concordance among Gene-Expression–Based Predictors for Breast Cancer
2006
Breast Cancer Subtype Approximated by Estrogen Receptor, Progesterone Receptor, and HER-2 Is Associated With Local and Distant Recurrence After Breast-Conserving Therapy
2008
Ki67 Index, HER2 Status, and Prognosis of Patients With Luminal B Breast Cancer
2009 Standout
Comprehensive molecular portraits of human breast tumours
2012 StandoutNature
A Basal Epithelial Phenotype Is More Frequent in Interval Breast Cancers Compared with Screen Detected Tumors
2005
Use of immunohistochemical markers can refine prognosis in triple negative breast cancer
2007
Triple negative tumours: a critical review
2007
Genes harbouring susceptibility SNPs are differentially expressed in the breast cancer subtypes
2007
Classical Cyclophosphamide, Methotrexate, and Fluorouracil Chemotherapy Is More Effective in Triple-Negative, Node-Negative Breast Cancer: Results From Two Randomized Trials of Adjuvant Chemoendocrine Therapy for Node-Negative Breast Cancer
2010
Hierarchical Mechanisms for Direct Reprogramming of Fibroblasts to Neurons
2013 StandoutNobel
Biological Processes Associated with Breast Cancer Clinical Outcome Depend on the Molecular Subtypes
2008
The transcriptional repressor Snail promotes mammary tumor recurrence
2005
The functional loss of the retinoblastoma tumour suppressor is a common event in basal-like and luminal B breast carcinomas
2008
Steroid Hormone Receptor Status of Mouse Mammary Stem Cells
2006
Hallmarks of Cancer: The Next Generation
2011 Standout
Triple-Negative Breast Cancer: Clinical Features and Patterns of Recurrence
2007 Standout
Immunohistochemical and Clinical Characterization of the Basal-Like Subtype of Invasive Breast Carcinoma
2004 Standout
Germline BRCA1 Mutations and a Basal Epithelial Phenotype in Breast Cancer
2003
Hypoxia induces the breast cancer stem cell phenotype by HIF-dependent and ALKBH5-mediated m 6 A-demethylation of NANOG mRNA
2016 StandoutNobel
High‐throughput protein expression analysis using tissue microarray technology of a large well‐characterised series identifies biologically distinct classes of breast cancer confirming recent cDNA expression analyses
2005
Triple-Negative Breast Cancer
2010 Standout
Intrinsic molecular signature of breast cancer in a population-based cohort of 412 patients
2006
Basal-Like Breast Cancer Defined by Five Biomarkers Has Superior Prognostic Value than Triple-Negative Phenotype
2008 Standout
The DNA-damage response in human biology and disease
2009 StandoutNature
Hallmarks of 'BRCAness' in sporadic cancers
2004
BRCA1 and BRCA2: 1994 and beyond
2004
Inflammation and cancer
2002 StandoutNature
The contribution of gene expression profiling to breast cancer classification, prognostication and prediction: a retrospective of the last decade
2009
Extracellular matrix signature identifies breast cancer subgroups with different clinical outcome
2007
Widespread mRNA Association with Cytoskeletal Motor Proteins and Identification and Dynamics of Myosin-Associated mRNAs in S. cerevisiae
2012 StandoutNobel
Reproductive history and risk of three breast cancer subtypes defined by three biomarkers
2010
Molecular heterogeneity of breast carcinomas and the cancer stem cell hypothesis
2007
Outcome signature genes in breast cancer: is there a unique set?
2004
Systematic Identification of mRNAs Recruited to Argonaute 2 by Specific microRNAs and Corresponding Changes in Transcript Abundance
2008
Origins of breast cancer subtypes and therapeutic implications
2007
Epithelial-Mesenchymal Transitions in Development and Disease
2009 Standout
Transformation of Different Human Breast Epithelial Cell Types Leads to Distinct Tumor Phenotypes
2007
A Core MYC Gene Expression Signature Is Prominent in Basal-Like Breast Cancer but Only Partially Overlaps the Core Serum Response
2009
X chromosomal abnormalities in basal-like human breast cancer
2006
Molecular Breast Cancer Subtypes in Premenopausal African-American Women, Tumor Biologic Factors and Clinical Outcome
2007
The Association Between Biological Subtype and Isolated Regional Nodal Failure After Breast-Conserving Therapy
2010
Chromatin signature reveals over a thousand highly conserved large non-coding RNAs in mammals
2009 StandoutNature
Intravital imaging of cell movement in tumours
2003
Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer
2005 Standout
Chemotherapy-Induced Ca2+ Release Stimulates Breast Cancer Stem Cell Enrichment
2017 StandoutNobel
Targeting the DNA repair defect in BRCA mutant cells as a therapeutic strategy
2005 StandoutNature
Mutation of GATA3 in human breast tumors
2004
Meta-analysis of gene expression profiles in breast cancer: toward a unified understanding of breast cancer subtyping and prognosis signatures
2008
Gene expression patterns associated with p53 status in breast cancer
2006
Significance, detection and markers of disseminated breast cancer cells
2006
Latent Bone Metastasis in Breast Cancer Tied to Src-Dependent Survival Signals
2009
Histological and molecular types of breast cancer: is there a unifying taxonomy?
2009
How basal are triple‐negative breast cancers?
2008
Ubiquitin-dependent regulation of COPII coat size and function
2012 StandoutNatureNobel
Breast cancer genomes — form and function
2010
Insight into the heterogeneity of breast cancer through next-generation sequencing
2011
Ferroptosis: An Iron-Dependent Form of Nonapoptotic Cell Death
2012 Standout
Integrated genomic characterization of endometrial carcinoma
2013 StandoutNature
Importin Beta
2004
PD-1 and PD-L1 Immune Checkpoint Blockade to Treat Breast Cancer
2016 Standout
Natural RNA circles function as efficient microRNA sponges
2013 StandoutNature
Distinct patterns of DNA copy number alteration are associated with different clinicopathological features and gene‐expression subtypes of breast cancer
2006
Presence of bone marrow micrometastasis is associated with different recurrence risk within molecular subtypes of breast cancer
2007
Pioneer transcription factors: establishing competence for gene expression
2011
Fiji: an open-source platform for biological-image analysis
2012 Standout
BRCA1 transcriptionally regulates genes associated with the basal-like phenotype in breast cancer
2009
TGFβ Primes Breast Tumors for Lung Metastasis Seeding through Angiopoietin-like 4
2008
Identifying Site-specific Metastasis Genes and Functions
2005
Evaluation of Factors Related to Late Recurrence - Later than 10 Years after the Initial Treatment - in Primary Breast Cancer
2013 Standout
Epidemiology of basal-like breast cancer
2007
Basal-like Breast cancer DNA copy number losses identify genes involved in genomic instability, response to therapy, and patient survival
2011
Gene-Expression Signatures in Breast Cancer
2009
BRCA1 functions as a breast stem cell regulator
2004
Meeting Highlights: International Expert Consensus on the Primary Therapy of Early Breast Cancer 2005
2005
Imaging in Systems Biology
2007
The p63/p73 network mediates chemosensitivity to cisplatin in a biologically defined subset of primary breast cancers
2007
BRCA1 Basal-like Breast Cancers Originate from Luminal Epithelial Progenitors and Not from Basal Stem Cells
2010
Therapeutic potential of PARP inhibitors for metastatic breast cancer
2011
Stem/Progenitor Cells in Mouse Mammary Gland Development and Breast Cancer
2005
Distribution and Dynamics of Chromatin Modification Induced by a Defined DNA Double-Strand Break
2004
Ki67 expression in breast cancer
2016 Standout
Triple negative breast cancer: molecular profiling and prognostic impact in adjuvant anthracycline-treated patients
2007
BRCA1 dysfunction in sporadic basal-like breast cancer
2006
BRCA1 promoter methylation in sporadic breast tumors: relationship to gene expression profiles
2005
CDK Inhibitor p18INK4c Is a Downstream Target of GATA3 and Restrains Mammary Luminal Progenitor Cell Proliferation and Tumorigenesis
2009
Adjuvant therapies for special types of breast cancer
2011
The small nuclear GTPase Ran: How much does it run?
1996
Diverse RNA-Binding Proteins Interact with Functionally Related Sets of RNAs, Suggesting an Extensive Regulatory System
2008
Global quantification of mammalian gene expression control
2011 StandoutNature
STAR NET 2: a web-based tool for accelerating discovery of gene regulatory networks using microarray co-expression data
2009
The Crystal Structure of Yeast Fatty Acid Synthase, a Cellular Machine with Eight Active Sites Working Together
2007 StandoutNobel
Race, Breast Cancer Subtypes, and Survival in the Carolina Breast Cancer Study
2006 Standout
Role of YAP/TAZ in mechanotransduction
2011 StandoutNature
Pattern of metastatic spread in triple-negative breast cancer
2008
Breast cancer metastasis: markers and models
2005 Standout
Gene expression profiling and histopathological characterization of triple-negative/basal-like breast carcinomas
2007
Trex1 Exonuclease Degrades ssDNA to Prevent Chronic Checkpoint Activation and Autoimmune Disease
2007 StandoutNobel
Human gene correlation analysis (HGCA): A tool for the identification of transcriptionally co-expressed genes
2012
Molecular Cytogenetic Identification of Subgroups of Grade III Invasive Ductal Breast Carcinomas with Different Clinical Outcomes
2004
Circadian clock disruption improves the efficacy of chemotherapy through p73-mediated apoptosis
2011 StandoutNobel
cut11+: A Gene Required for Cell Cycle-dependent Spindle Pole Body Anchoring in the Nuclear Envelope and Bipolar Spindle Formation inSchizosaccharomyces pombe
1998 StandoutNobel
Prognostic Significance of Basal-Like Phenotype and Fascin Expression in Node-Negative Invasive Breast Carcinomas
2006
Inositol polyphosphate 4-phosphatase II regulates PI3K/Akt signaling and is lost in human basal-like breast cancers
2010
Immuno-Navigator, a batch-corrected coexpression database, reveals cell type-specific gene networks in the immune system
2016 StandoutNobel
Pathologic Complete Response Rates in Young Women With BRCA1-Positive Breast Cancers After Neoadjuvant Chemotherapy
2009
Two distinct classes of Ran-binding sites on the nucleoporin Nup-358
1999 StandoutNobel
Ferroportin and Iron Regulation in Breast Cancer Progression and Prognosis
2010
A Perspective on Cancer Cell Metastasis
2011 StandoutScience
The genome-wide expression response to telomerase deletion in Saccharomyces cerevisiae
2002 StandoutNobel
Basal-Like Breast Cancer: A Critical Review
2008
Micrometastatic Disease and Metastatic Outgrowth: Clinical Issues and Experimental Approaches
2009
Breast Cancer Subtypes and the Risk of Local and Regional Relapse
2010
Hypoxia-inducible factor 1-dependent expression of adenosine receptor 2B promotes breast cancer stem cell enrichment
2018 StandoutNobel
Immune targeting in breast cancer.
2015
The C-terminal region of activation-induced cytidine deaminase is responsible for a recombination function other than DNA cleavage in class switch recombination
2009 StandoutNobel
Chemotherapy induces enrichment of CD47 + /CD73 + /PDL1 + immune evasive triple-negative breast cancer cells
2018 StandoutNobel
Agreement in Breast Cancer Classification between Microarray and Quantitative Reverse Transcription PCR from Fresh-Frozen and Formalin-Fixed, Paraffin-Embedded Tissues
2007
Breast Cancer Subtypes and Response to Docetaxel in Node-Positive Breast Cancer: Use of an Immunohistochemical Definition in the BCIRG 001 Trial
2009
Differences in Risk Factors for Breast Cancer Molecular Subtypes in a Population-Based Study
2007
Cancer Genome Landscapes
2013 StandoutScience
Hypoxia-inducible factor 1-dependent expression of platelet-derived growth factor B promotes lymphatic metastasis of hypoxic breast cancer cells
2012 StandoutNobel
Surviving the Breakup: The DNA Damage Checkpoint
2006
BRCA1-IRIS promotes human tumor progression through PTEN blockade and HIF-1α activation
2018 StandoutNobel
Histone demethylase JMJD2C is a coactivator for hypoxia-inducible factor 1 that is required for breast cancer progression
2012 StandoutNobel
Hypoxic retinal Müller cells promote vascular permeability by HIF-1–dependent up-regulation of angiopoietin-like 4
2013 StandoutNobel
Core epithelial-to-mesenchymal transition interactome gene-expression signature is associated with claudin-low and metaplastic breast cancer subtypes
2010
Mitochondrial HEP27 Is a c-Myb Target Gene That Inhibits Mdm2 and Stabilizes p53
2010
The Prognostic Implication of the Basal-Like (Cyclin Ehigh/p27low/p53+/Glomeruloid-Microvascular-Proliferation+) Phenotype of BRCA1 -Related Breast Cancer
2004
Gene Expression Profiling in Breast Cancer: Understanding the Molecular Basis of Histologic Grade To Improve Prognosis
2006 Standout
HIF-1 regulates CD47 expression in breast cancer cells to promote evasion of phagocytosis and maintenance of cancer stem cells
2015 StandoutNobel
Ferroportin and Iron Regulation in Breast Cancer Progression and Prognosis
2010
Ran, a GTPase involved in nuclear processes: its regulators and effectors
1996
Chemotherapy triggers HIF-1–dependent glutathione synthesis and copper chelation that induces the breast cancer stem cell phenotype
2015 StandoutNobel
Hypoxia-inducible factor-dependent signaling between triple-negative breast cancer cells and mesenchymal stem cells promotes macrophage recruitment
2014 StandoutNobel
Different Gene Expression Patterns in Invasive Lobular and Ductal Carcinomas of the Breast
2004
Preferential binding of ATR protein to UV-damaged DNA
2002 StandoutNobel
Distinct breast cancer stem/progenitor cell populations require either HIF1α or loss of PHD3 to expand under hypoxic conditions
2015
Definition of Clinically Distinct Molecular Subtypes in Estrogen Receptor–Positive Breast Carcinomas Through Genomic Grade
2007
Molecular Classification and Molecular Forecasting of Breast Cancer: Ready for Clinical Application?
2005
Aberrant mitosis in fission yeast mutants defective in fatty acid synthetase and acetyl CoA carboxylase.
1996
Immunopurification of Ago1 miRNPs selects for a distinct class of microRNA targets
2009 StandoutNobel
Works of János Demeter being referenced
The DNA Damage Checkpoint Signal in Budding Yeast Is Nuclear Limited
2000
Arrest, Adaptation, and Recovery following a Chromosome Double-strand Break in Saccharomyces cerevisiae
2000
The Stanford Microarray Database: implementation of new analysis tools and open source release of software
2006
Implementation of GenePattern within the Stanford Microarray Database
2008
Repeated observation of breast tumor subtypes in independent gene expression data sets
2003 Standout
A mutation in the RCC1-related protein pim1 results in nuclear envelope fragmentation in fission yeast.
1995