Citation Impact
Citing Papers
Physical limits of cells and proteomes
2011
Spatially resolved, highly multiplexed RNA profiling in single cells
2015 StandoutScience
GEMME: A Simple and Fast Global Epistatic Model Predicting Mutational Effects
2019
High-throughput biochemical profiling reveals sequence determinants of dCas9 off-target binding and unbinding
2017 StandoutNobel
Probing Allostery Through DNA
2013 Science
Folding DNA into Twisted and Curved Nanoscale Shapes
2009 Science
De novo design of transmembrane β barrels
2021 StandoutScienceNobel
Nuclear Lamin-A Scales with Tissue Stiffness and Enhances Matrix-Directed Differentiation
2013 StandoutScience
A Logic-Gated Nanorobot for Targeted Transport of Molecular Payloads
2012 StandoutScience
Finding regulatory elements and regulatory motifs: a general probabilistic framework
2007
A Quantitative Spatiotemporal Atlas of Gene Expression in the Drosophila Blastoderm
2008
Inverting family GH156 sialidases define an unusual catalytic motif for glycosidase action
2019 StandoutNobel
An integrated encyclopedia of DNA elements in the human genome
2012 StandoutNature
The COMET toolkit for composing customizable genetic programs in mammalian cells
2020
Enhancing extracellular vesicle cargo loading and functional delivery by engineering protein-lipid interactions
2024 StandoutNobel
The embryo as a laboratory: quantifying transcription in Drosophila
2014
Entanglement Entropy of theν = 1 / 2
2015 StandoutNobel
Discoveries in structure and physiology of mechanically activated ion channels
2020 StandoutNatureNobel
Theoretical and Computational Investigation of Flagellin Translocation and Bacterial Flagellum Growth
2011
Dense packings of the Platonic and Archimedean solids
2009 Nature
Conservation of the Capsid Structure in Tailed dsDNA Bacteriophages: the Pseudoatomic Structure of ϕ29
2005
A single molecule view of gene expression
2009
From DNA sequence to transcriptional behaviour: a quantitative approach
2009
Modular and tunable biological feedback control using a de novo protein switch
2019 StandoutNatureNobel
Cancer Epigenetics: From Mechanism to Therapy
2012 Standout
The Human Transcription Factors
2018 Standout
Computational Analysis of Viscoelastic Properties of Crosslinked Actin Networks
2009
Self-assembly of DNA into nanoscale three-dimensional shapes
2009 StandoutNature
Single-Molecule Dynamics of Enhanceosome Assembly in Embryonic Stem Cells
2014 StandoutNobel
Mitochondria: In Sickness and in Health
2012 Standout
Modeling the dynamics of transcriptional gene regulatory networks for animal development
2008
Mechanism of tetracycline resistance by ribosomal protection protein Tet(O)
2013 StandoutNobel
Mechanically Activated Ion Channels
2015 StandoutNobel
Piezos thrive under pressure: mechanically activated ion channels in health and disease
2017 StandoutNobel
Implications of the Hybrid Epithelial/Mesenchymal Phenotype in Metastasis
2015
Bending modes of DNA directly addressed by cryo-electron microscopy of DNA minicircles
2009 StandoutNobel
Organizing principles for dense packings of nonspherical hard particles: Not all shapes are created equal
2012
A Biophysical Model of CRISPR/Cas9 Activity for Rational Design of Genome Editing and Gene Regulation
2016
Massively parallel determination and modeling of endonuclease substrate specificity
2014 StandoutNobel
The force-from-lipid (FFL) principle of mechanosensitivity, at large and in elements
2014
Fiji: an open-source platform for biological-image analysis
2012 Standout
On the Dependency of Cellular Protein Levels on mRNA Abundance
2016 Standout
Structural changes in a marine podovirus associated with release of its genome into Prochlorococcus
2010
Van der Waals heterostructures
2013 StandoutNature
Experimental strategies for studying transcription factor-DNA binding specificities
2010
De novo design of bioactive protein switches
2019 StandoutNatureNobel
EMT: 2016
2016 Standout
Transcription of functionally related constitutive genes is not coordinated
2010
Computational Modeling of the Hematopoietic Erythroid-Myeloid Switch Reveals Insights into Cooperativity, Priming, and Irreversibility
2009
General properties of transcriptional time series in Escherichia coli
2011
Regulation of Piezo2 Mechanotransduction by Static Plasma Membrane Tension in Primary Afferent Neurons
2016
Higher-order chromatin structure: bridging physics and biology
2012
Quantitative Models of the Mechanisms That Control Genome-Wide Patterns of Transcription Factor Binding during Early Drosophila Development
2011
Spontaneous Sharp Bending of Double-Stranded DNA
2004
Spin liquids in frustrated magnets
2010 StandoutNature
Critical Slowing Down Exponents of Mode Coupling Theory
2012 StandoutNobel
Global quantification of mammalian gene expression control
2011 StandoutNature
Neutrality Point of Graphene with Coplanar Charged Impurities
2009
Transcriptome-wide Identification of RNA-Binding Protein and MicroRNA Target Sites by PAR-CLIP
2010 Standout
LRRC8 Proteins Form Volume-Regulated Anion Channels that Sense Ionic Strength
2016 StandoutNobel
Glass Transition and Random Close Packing above Three Dimensions
2011 StandoutNobel
DNA-based self-assembly of chiral plasmonic nanostructures with tailored optical response
2012 StandoutNature
De Novo Designed Protein-Interaction Modules for In-Cell Applications
2020
Topological insulators and superconductors
2011 Standout
Using deep sequencing to characterize the biophysical mechanism of a transcriptional regulatory sequence
2010
Anderson transitions
2008
Genomes in Focus: Development and Applications of CRISPR‐Cas9 Imaging Technologies
2017 StandoutNobel
The Structures of Bacteriophages K1E and K1-5 Explain Processive Degradation of Polysaccharide Capsules and Evolution of New Host Specificities
2007
Mode coupling as a Landau theory of the glass transition
2009
Genetic Determinants and Cellular Constraints in Noisy Gene Expression
2013 Science
Freezing transitions and the density of states of two-dimensional random Dirac Hamiltonians
2002
Dimensional study of the caging order parameter at the glass transition
2012 StandoutNobel
Static replica approach to critical correlations in glassy systems
2013 StandoutNobel
Simulations of RNA base pairs in a nanodroplet reveal solvation-dependent stability
2007 StandoutNobel
Osmotic pressure inhibition of DNA ejection from phage
2003
Superresolution Fluorescence Imaging of Mitochondrial Nucleoids Reveals Their Spatial Range, Limits, and Membrane Interaction
2011
DNA origami protection and molecular interfacing through engineered sequence-defined peptoids
2020 StandoutNobel
Dynamics and Proton Conduction of Heterogeneously Confined Imidazole in Porous Coordination Polymers
2022 StandoutNobel
Chromatin remodeling by DNA bending, not twisting
2005 StandoutNobel
Feeling the hidden mechanical forces in lipid bilayer is an original sense
2014
Electronic transport in two-dimensional graphene
2011 Standout
Power-law spin correlations in pyrochlore antiferromagnets
2005
Structural basis for scaffolding-mediated assembly and maturation of a dsDNA virus
2011 StandoutNobel
Asymmetric mechanosensitivity in a eukaryotic ion channel
2017
Polymers under confinement: single polymers, how they interact, and as model chromosomes
2015
Reshaping de Novo Protein Switches into Bioresponsive Materials for Biomarker, Toxin, and Viral Detection
2022 StandoutNobel
Suppressing Brownian motion of individual biomolecules in solution
2006 StandoutNobel
Growth Factors, Matrices, and Forces Combine and Control Stem Cells
2009 StandoutScience
Universal entanglement entropy in two-dimensional conformal quantum critical points
2009
Reconfigurable asymmetric protein assemblies through implicit negative design
2022 StandoutScienceNobel
Accurate proteome-wide missense variant effect prediction with AlphaMissense
2023 StandoutScienceNobel
Self-Assembly of Colloidal Nanocrystals: From Intricate Structures to Functional Materials
2016 Standout
A Model for Viral Genome Packing
2006
The electronic properties of graphene
2009 StandoutNobel
Works of Jané Kondev being referenced
Operator Sequence Alters Gene Expression Independently of Transcription Factor Occupancy in Bacteria
2012
Landau-like theory of glassy dynamics
2004
Transcription by the numbers redux: experiments and calculations that surprise
2010
Biological consequences of tightly bent DNA: The other life of a macromolecular celebrity
2006
Membrane mechanics as a probe of ion-channel gating mechanisms
2008
Forces during Bacteriophage DNA Packaging and Ejection
2004
Effect of Promoter Architecture on the Cell-to-Cell Variability in Gene Expression
2011
Transcriptional regulation by the numbers: models
2005
Elasticity of semiflexible polymers in two dimensions
2005
Lattice Model of Diffusion-Limited Bimolecular Chemical Reactions in Confined Environments
2009
Transcriptional control of noise in gene expression
2008
Supersymmetry and localization in the quantum Hall effect
1997
Strong intranucleoid interactions organize the Escherichia coli chromosome into a nucleoid filament
2010
Transcriptional regulation by the numbers: applications
2005
Nonlinear measures for characterizing rough surface morphologies
2000
Kac-Moody symmetries of critical ground states
1996
Reduced amino acid alphabets exhibit an improved sensitivity and selectivity in fold assignment
2009
Four-coloring model on the square lattice: A critical ground state
1995
Complex signal processing in synthetic gene circuits using cooperative regulatory assemblies
2019 Science
Mechanics of DNA packaging in viruses
2003
Regulation of Noise in Gene Expression
2013