Citation Impact

Citing Papers

Selective targeting of engineered T cells using orthogonal IL-2 cytokine-receptor complexes
2018 StandoutScienceNobel
Computational Design of Self-Assembling Protein Nanomaterials with Atomic Level Accuracy
2012 StandoutScienceNobel
Principles for designing proteins with cavities formed by curved β sheets
2017 StandoutScienceNobel
Global analysis of protein folding using massively parallel design, synthesis, and testing
2017 StandoutScienceNobel
De novo design of transmembrane β barrels
2021 StandoutScienceNobel
Computational Thermostabilization of an Enzyme
2005 StandoutScienceNobel
Computational design of ligand binding is not a solved problem
2009
Computational Design of an Enzyme Catalyst for a Stereoselective Bimolecular Diels-Alder Reaction
2010 StandoutScienceNobel
Alteration of enzyme specificity by computational loop remodeling and design
2009 StandoutNobel
Hierarchical design of pseudosymmetric protein nanocages
2024 StandoutNatureNobel
De novo design of allosterically switchable protein assemblies
2024 StandoutNatureNobel
Engineered receptors for soluble cellular communication and disease sensing
2024 StandoutNatureNobel
Protein Conformational Switches: From Nature to Design
2012
High-Resolution Structural Validation of the Computational Redesign of Human U1A Protein
2006 StandoutNobel
Structure of the TRPA1 ion channel suggests regulatory mechanisms
2015 StandoutNatureNobel
RNA synthetic biology
2006
The Highly Cooperative Folding of Small Naturally Occurring Proteins Is Likely the Result of Natural Selection
2007 StandoutNobel
Mis-translation of a Computationally Designed Protein Yields an Exceptionally Stable Homodimer: Implications for Protein Engineering and Evolution
2006 StandoutNobel
Stochastic Sensing of TNT with a Genetically Engineered Pore
2005
Modular and tunable biological feedback control using a de novo protein switch
2019 StandoutNatureNobel
Intelligent design: the de novo engineering of proteins with specified functions
2006
Rewiring human cellular input–output using modular extracellular sensors
2016
Semi-rational approaches to engineering enzyme activity: combining the benefits of directed evolution and rational design
2005
Computational Enzyme Design
2013 StandoutNobel
Accurate design of co-assembling multi-component protein nanomaterials
2014 StandoutNatureNobel
The road to fully programmable protein catalysis
2022 StandoutNatureNobel
Role of the Biomolecular Energy Gap in Protein Design, Structure, and Evolution
2012 StandoutNobel
De novo design of luciferases using deep learning
2023 StandoutNatureNobel
Principles for designing ideal protein structures
2012 StandoutNatureNobel
Designed Armadillo Repeat Proteins as General Peptide-Binding Scaffolds: Consensus Design and Computational Optimization of the Hydrophobic Core
2008
Computational Design and Characterization of a Monomeric Helical Dinuclear Metalloprotein
2003
Rational design of α-helical tandem repeat proteins with closed architectures
2015 StandoutNatureNobel
Engineering Allosteric Regulation into Biological Catalysts
2009
A Computationally Designed Inhibitor of an Epstein-Barr Viral Bcl-2 Protein Induces Apoptosis in Infected Cells
2014 StandoutNobel
High-resolution structure prediction and the crystallographic phase problem
2007 StandoutNatureNobel
The coming of age of de novo protein design
2016 StandoutNatureNobel
High-resolution Structural and Thermodynamic Analysis of Extreme Stabilization of Human Procarboxypeptidase by Computational Protein Design
2006 StandoutNobel
A Genetic Approach to Visualization of Multisynaptic Neural Pathways Using Plant Lectin Transgene
1999
Kemp elimination catalysts by computational enzyme design
2008 StandoutNatureNobel
Improved protein structure prediction using potentials from deep learning
2020 StandoutNatureNobel
De novo design of a fluorescence-activating β-barrel
2018 StandoutNatureNobel
De novo design of bioactive protein switches
2019 StandoutNatureNobel
Theoretical and Computational Protein Design
2011
Surrogate Wnt agonists that phenocopy canonical Wnt and β-catenin signalling
2017 StandoutNatureNobel
Quantitative reactivity profiling predicts functional cysteines in proteomes
2010 StandoutNatureNobel
Structure-based design of non-natural amino-acid inhibitors of amyloid fibril formation
2011 StandoutNatureNobel
De novo proteins from designed combinatorial libraries
2004
Improved side‐chain modeling for protein–protein docking
2005 StandoutNobel
Computational Design of a New Hydrogen Bond Network and at Least a 300-fold Specificity Switch at a Protein−Protein Interface
2006 StandoutNobel
Computer-aided design of functional protein interactions
2009
Exploring the repeat protein universe through computational protein design
2015 StandoutNatureNobel
Programmable design of orthogonal protein heterodimers
2018 StandoutNatureNobel
Computational design of ligand-binding proteins with high affinity and selectivity
2013 StandoutNatureNobel
Computational redesign of protein-protein interaction specificity
2004 StandoutNobel
The Molecular Architecture of Odor and Pheromone Sensing in Mammals
2000 StandoutNobel
Design of protein conformational switches
2006
The Design of Coiled-Coil Structures and Assemblies
2005
The Backrub Motion: How Protein Backbone Shrugs When a Sidechain Dances
2006
An accurate binding interaction model in de novo computational protein design of interactions: If you build it, they will bind
2013
Detection of glutamate release from neurons by genetically encoded surface-displayed FRET nanosensors
2005
Computation-Guided Backbone Grafting of a Discontinuous Motif onto a Protein Scaffold
2011 StandoutScienceNobel
Protein engineering by highly parallel screening of computationally designed variants
2016
Toward High-Resolution de Novo Structure Prediction for Small Proteins
2005 StandoutScienceNobel
Rational HIV Immunogen Design to Target Specific Germline B Cell Receptors
2013 StandoutScienceNobel
De novo design of protein homo-oligomers with modular hydrogen-bond network–mediated specificity
2016 StandoutScienceNobel
Cellular checkpoint control using programmable sequential logic
2018 Science
COMPUTER-BASED DESIGN OF NOVEL PROTEIN STRUCTURES
2005
Design of a Novel Globular Protein Fold with Atomic-Level Accuracy
2003 StandoutScienceNobel
Progress in Modeling of Protein Structures and Interactions
2005 StandoutScienceNobel
Construction and optimization of a family of genetically encoded metabolite sensors by semirational protein engineering
2005
Optical measurement of synaptic glutamate spillover and reuptake by linker optimized glutamate-sensitive fluorescent reporters
2008 StandoutNobel
Protein Design by Directed Evolution
2008
Computational Design of Proteins Targeting the Conserved Stem Region of Influenza Hemagglutinin
2011 StandoutScienceNobel
De Novo Computational Design of Retro-Aldol Enzymes
2008 StandoutScienceNobel
Computational Design of a Single Amino Acid Sequence that Can Switch between Two Distinct Protein Folds
2006
Energy Functions in De Novo Protein Design: Current Challenges and Future Prospects
2013
Top-down design of protein architectures with reinforcement learning
2023 StandoutScienceNobel
De novo design of catalytic proteins
2004
The Protein Folding Problem
2008
Protein Assembly by Design
2021
De novo design of protein logic gates
2020 StandoutScienceNobel
Design of ordered two-dimensional arrays mediated by noncovalent protein-protein interfaces
2015 StandoutScienceNobel

Works of James J. Smith being referenced

Programmable Ligand Detection System in Plants through a Synthetic Signal Transduction Pathway
2011
Computational design of receptor and sensor proteins with novel functions
2003 Nature
Nucleotide sequences of cDNA clones encoding wheat germ agglutinin isolectins A and D
1989
Construction of a fluorescent biosensor family
2002
Rankless by CCL
2026