Citation Impact

Citing Papers

Computational protein design enables a novel one-carbon assimilation pathway
2015 StandoutNobel
An Engineered Microbial Platform for Direct Biofuel Production from Brown Macroalgae
2012 StandoutScienceNobel
Differentiation Stage-Specific Requirement in Hypoxia-Inducible Factor-1α–Regulated Glycolytic Pathway during Murine B Cell Development in Bone Marrow
2009 StandoutNobel
Metabolomics‐driven quantitative analysis of ammonia assimilation in E. coli
2009
COBRApy: COnstraints-Based Reconstruction and Analysis for Python
2013
Dynamic coupling between conformations and nucleotide states in DNA gyrase
2018
Increasing extracellular H2O2 produces a bi-phasic response in intracellular H2O2, with peroxiredoxin hyperoxidation only triggered once the cellular H2O2-buffering capacity is overwhelmed
2016
The ChEBI reference database and ontology for biologically relevant chemistry: enhancements for 2013
2012
DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants
2016 Standout
Striking Oxygen Sensitivity of the Peptidylglycine α-Amidating Monooxygenase (PAM) in Neuroendocrine Cells
2015 StandoutNobel
Characterisation and identification of bacteria using SERS
2008
Phosphorus-limited growth dynamics in two Baltic Sea cyanobacteria, Nodularia sp. and Aphanizomenon sp.
2006
Climate change affects timing and size of populations of an invasive cyanobacterium in temperate regions
2007
High-throughput functional annotation and data mining with the Blast2GO suite
2008 Standout
The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function
2010 Standout
Iron behaving badly: inappropriate iron chelation as a major contributor to the aetiology of vascular and other progressive inflammatory and degenerative diseases
2009
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
2015 Standout
Influence of Metabolism on Epigenetics and Disease
2013 StandoutNobel
Network biology: understanding the cell's functional organization
2004 Standout
Predicting transmembrane protein topology with a hidden markov model: application to complete genomes11Edited by F. Cohen
2001 Standout
Cell Signaling by Receptor Tyrosine Kinases
2010 Standout
An overview of RNAs with regulatory functions in gram-positive bacteria
2009 StandoutNobel
Web Services at the European Bioinformatics Institute
2007
Transformation by the (R)-enantiomer of 2-hydroxyglutarate linked to EGLN activation
2012 StandoutNatureNobel
Sustainable polymers from renewable resources
2016 StandoutNature
antiSMASH 3.0—a comprehensive resource for the genome mining of biosynthetic gene clusters
2015 Standout
DrugBank 4.0: shedding new light on drug metabolism
2013 Standout
Linking the genes: inferring quantitative gene networks from microarray data
2002
Metabolomics: Current technologies and future trends
2006
Optimal Determination of Particle Orientation, Absolute Hand, and Contrast Loss in Single-particle Electron Cryomicroscopy
2003 StandoutNobel
Paracrine Induction of HIF by Glutamate in Breast Cancer: EglN1 Senses Cysteine
2016 StandoutNobel
PubChem Substance and Compound databases
2015 Standout
Bacterial replacement therapy: adapting ‘germ warfare’ to infection prevention
2003
Automated refinement and inference of analytical models for metabolic networks
2011
Pumping capacity of bacterial reaction centers and backpressure regulation of energy transduction
2001
From Dietary Fiber to Host Physiology: Short-Chain Fatty Acids as Key Bacterial Metabolites
2016 Standout
Bacterial redox sensors
2004
Reactome: a knowledge base of biologic pathways and processes
2007
Benzene‐Free Synthesis of Adipic Acid
2002
β2-Adrenergic Receptor Signaling and Desensitization Elucidated by Quantitative Modeling of Real Time cAMP Dynamics
2007 StandoutNobel
Lock-Arm Supramolecular Ordering: A Molecular Construction Set for Cocrystallizing Organic Charge Transfer Complexes
2014 StandoutNobel
Dental caries
2007 Standout
Recent advances in lactic acid production by microbial fermentation processes
2013
Metabolic engineering of Escherichia coli for direct production of 1,4-butanediol
2011
Diversity, stability and resilience of the human gut microbiota
2012 StandoutNature
Metabolomics by numbers: acquiring and understanding global metabolite data
2004
Glucose Catabolism ofEscherichia coliStrains with Increased Activity and Altered Regulation of Key Glycolytic Enzymes
1999
MetaboLights—an open-access general-purpose repository for metabolomics studies and associated meta-data
2012 Standout
Quantifying the Contribution of the Liver to Glucose Homeostasis: A Detailed Kinetic Model of Human Hepatic Glucose Metabolism
2012
Cell-signalling dynamics in time and space
2006
The RAVEN Toolbox and Its Use for Generating a Genome-scale Metabolic Model for Penicillium chrysogenum
2013
Hemicelluloses for fuel ethanol: A review
2010
STRING 8--a global view on proteins and their functional interactions in 630 organisms
2008 Standout
Systems chemistry
2007
The immune epitope database (IEDB) 3.0
2014 Standout
PULSES OF PHOSPHATE PROMOTE DOMINANCE OF THE TOXIC CYANOPHYTE CYLINDROSPERMOPSIS RACIBORSKII IN A SUBTROPICAL WATER RESERVOIR1
2009
Fingerprinting food: current technologies for the detection of food adulteration and contamination
2012 Standout
The gntP gene of Escherichia coli involved in gluconate uptake
1996
Ecophysiological influence of light and mixing onAnabaena circinalis(Nostocales, Cyanobacteria)
2005
Complexation of Polyoxometalates with Cyclodextrins
2015 StandoutNobel
Mechanisms of Insulin Action and Insulin Resistance
2018 Standout
Baltic Sea nitrogen fixation estimated from the summer increase in upper mixed layer total nitrogen
2001
Hydrogen production of Enterobacter aerogenes altered by extracellular and intracellular redox states
2002
Chemicals from lignin: an interplay of lignocellulose fractionation, depolymerisation, and upgrading
2018 Standout
Metabolic Flux Responses to Pyruvate Kinase Knockout in Escherichia coli
2002 StandoutNobel
Viability of intertwined supply networks: extending the supply chain resilience angles towards survivability. A position paper motivated by COVID-19 outbreak
2020 Standout
Membrane growth can generate a transmembrane pH gradient in fatty acid vesicles
2004 StandoutNobel
The EBI RDF platform: linked open data for the life sciences
2014
The Biofilm Concept: Consequences for Future Prophylaxis of Oral Diseases?
2004
Occurrence, Classification, and Biological Function of Hydrogenases:  An Overview
2007 Standout
Surface-Enhanced Raman Spectroscopy for Bioanalysis: Reliability and Challenges
2018 Standout
Bright Side of Lignin Depolymerization: Toward New Platform Chemicals
2018 Standout
Cloning, expression, and characterization of the Lactococcus lactis pfl gene, encoding pyruvate formate-lyase
1997
Mitochondrial Reactive Oxygen Species (ROS) and ROS-Induced ROS Release
2014 Standout
Metabolic Flux Ratio Analysis of Genetic and Environmental Modulations of Escherichia coli Central Carbon Metabolism
1999 StandoutNobel
Impact of environmental factors on toxic and bioactive peptide production by harmful cyanobacteria
2007
Nitrogen uptake and fixation in the cyanobacterium Cylindrospermopsis raciborskii under different nitrogen conditions
2003
Blooms Like It Hot
2008 StandoutScience
Fluorescent Sensors for Measuring Metal Ions in Living Systems
2014 Standout
BASIC: Baltic Sea cyanobacteria. An investigation of the structure and dynamics of water blooms of cyanobacteria in the Baltic Sea—responses to a changing environment
2003
Cytokine stimulation of aerobic glycolysis in hematopoietic cells exceeds proliferative demand
2004
MetaboAnalyst 4.0: towards more transparent and integrative metabolomics analysis
2018 Standout
Kinetics and thermodynamics of activation of quinoprotein glucose dehydrogenase apoenzyme in vivo and catalytic activity of the activated enzyme in Escherichia coli cells
2000
Cas9 interrogates DNA in discrete steps modulated by mismatches and supercoiling
2020 StandoutNobel
Glutathione/thioredoxin systems modulate mitochondrial H2O2 emission: An experimental-computational study
2012
Electrochemical Glucose Sensors and Their Applications in Diabetes Management
2008 Standout
Streptococcal viability and diminished stress tolerance in mutants lacking the signal recognition particle pathway or YidC2
2005
Species-specific responses of a cyanobacteriadominated phytoplankton community to artificial nutrient limitation in the Baltic Sea
2007
Protein Radicals in Enzyme Catalysis
1998 Standout
Membrane Composition Changes and Physiological Adaptation byStreptococcus mutansSignal Recognition Particle Pathway Mutants
2007
Discovering governing equations from data by sparse identification of nonlinear dynamical systems
2016 Standout
Principles of quasi-equivalence and Euclidean geometry govern the assembly of cubic and dodecahedral cores of pyruvate dehydrogenase complexes
1999
Pathway Thermodynamics Highlights Kinetic Obstacles in Central Metabolism
2014
Generation and Detection of Reactive Oxygen Species in Photocatalysis
2017 Standout
The rise of harmful cyanobacteria blooms: The potential roles of eutrophication and climate change
2011 Standout
Dissection of Central Carbon Metabolism of Hemoglobin-Expressing Escherichia coli by 13 C Nuclear Magnetic Resonance Flux Distribution Analysis in Microaerobic Bioprocesses
2001 StandoutNobel
Effect of nitrogen forms on growth, cell composition and N2 fixation of Cylindrospermopsis raciborskii in phosphorus-limited chemostat cultures
2008
The Signal Recognition Particle Pathway Is Required for Virulence in Streptococcus pyogenes
2008
Restricted Distribution of the Butyrate Kinase Pathway among Butyrate-Producing Bacteria from the Human Colon
2004

Works of Jacky L. Snoep being referenced

BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models
2010
DNA supercoiling in Escherichia coli is under tight and subtle homeostatic control, involving gene‐expression and metabolic regulation of both topoisomerase I and DNA gyrase
2002
Control Analysis for Autonomously Oscillating Biochemical Networks
2002
Differences in sensitivity to NADH of purified pyruvate dehydrogenase complexes ofEnterococcus faecalis,Lactococcus lactis,Azotobacter vinelandiiandEscherichia coli: Implications for their activity in vivo
1993
Towards building the silicon cell: A modular approach
2005
Quantitative aspects of glucose metabolism by Escherichia coli B/r, grown in the presence of pyrroloquinoline quinone
1991
Metabolic control in integrated biochemical systems
2002
Control of glycolytic flux inZymomonas mobilis by glucose 6-phosphate dehydrogenase activity
1996
DNA supercoiling depends on the phosphorylation potential in Escherichia coli
1996
Minimum information requested in the annotation of biochemical models (MIRIAM)
2005
Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochemistry
2000
Isolation and characterisation of the pyruvate dehydrogenase complex of anaerobically grown Enterococcus faecalis NCTC 775
1992
Characterization of the Zymomonas mobilis glucose facilitator gene product (glf) in recombinant Escherichia coli: examination of transport mechanism, kinetics and the role of glucokinase in glucose transport
1995
Competition for phosphorus between the nitrogen-fixing cyanobacteria Anabaena and Aphanizomenon
2006
Enzymes or redox couples? The kinetics of thioredoxin and glutaredoxin reactions in a systems biology context
2008
The Glycolytic Flux in Escherichia coli Is Controlled by the Demand for ATP
2002
Control analysis of trophic chains
2003
Catabolism of Branched-Chain α-Keto Acids in Enterococcus faecalis : the bkd Gene Cluster, Enzymes, and Metabolic Route
1999
The Silicon Cell Initiative
2004
Biothermokinetics of the living cell
1996
Construction and Characterization of an Effector Strain of Streptococcus mutans for Replacement Therapy of Dental Caries
2000
INTERACTION OF NITROGEN FIXATION AND PHOSPHORUS LIMITATION IN APHANIZOMENON FLOS‐AQUAE (CYANOPHYCEAE)1
1997
Isolation, characterization, and physiological role of the pyruvate dehydrogenase complex and alpha-acetolactate synthase of Lactococcus lactis subsp. lactis bv. diacetylactis
1992
Effect of the energy source on the NADH/NAD ratio and on pyruvate catabolism in anaerobic chemostat cultures ofEnterococcus faecalisNCTC 775
1991
Web-based kinetic modelling using JWS Online
2004
The Steady-State Internal Redox State (NADH/NAD) Reflects the External Redox State and Is Correlated with Catabolic Adaptation in Escherichia coli
1999
Protein burden in Zymomonas mobilis: negative flux and growth control due to overproduction of glycolytic enzymes
1995
Anffhmutant ofStreptococcus mutansis viable and able to physiologically adapt to low pH in continuous culture
2004
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