Citation Impact

Citing Papers

NCBI Taxonomy: a comprehensive update on curation, resources and tools
2020 Standout
Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic “supergroups”
2009 Standout
A genomic survey of the fish parasite Spironucleus salmonicida indicates genomic plasticity among diplomonads and significant lateral gene transfer in eukaryote genome evolution
2007
The gut mycobiome of the Human Microbiome Project healthy cohort
2017 Standout
The New Tree of Eukaryotes
2019
The COG database: an updated version includes eukaryotes
2003 Standout
Discovery of archaeal fusexins homologous to eukaryotic HAP2/GCS1 gamete fusion proteins
2022 StandoutNobel
Evolution of four gene families with patchy phylogenetic distributions: influx of genes into protist genomes
2006
Hedgehog: functions and mechanisms
2008 Standout
Comprehensive Multigene Phylogenies of Excavate Protists Reveal the Evolutionary Positions of “Primitive” Eukaryotes
2005
Cytoskeletal organization, phylogenetic affinities and systematics in the contentious taxon Excavata (Eukaryota)
2003
Reading the entrails of chickens: molecular timescales of evolution and the illusion of precision
2003 Standout
A review of long‐branch attraction
2005
Horizontal Gene Transfer from Diverse Bacteria to an Insect Genome Enables a Tripartite Nested Mealybug Symbiosis
2013 Standout
Evolutionary History of “Early-Diverging” Eukaryotes: The Excavate Taxon Carpediemonas is a Close Relative of Giardia1
2002
Evidence of plasmotomy in Blastocystis hominis
2007
Systematic Revision of Symbiodiniaceae Highlights the Antiquity and Diversity of Coral Endosymbionts
2018 Standout
The excavate protozoan phyla Metamonada Grasse emend. (Anaeromonadea, Parabasalia, Carpediemonas, Eopharyngia) and Loukozoa emend. (Jakobea, Malawimonas): their evolutionary affinities and new higher taxa
2003
Multiple origins of endosymbiosis within the Enterobacteriaceae (γ-Proteobacteria): convergence of complex phylogenetic approaches
2011
The tortoise and the hare II: relative utility of 21 noncoding chloroplast DNA sequences for phylogenetic analysis
2005 Standout
Horizontal gene transfer in eukaryotic evolution
2008 Standout
Colletotrichum gloeosporioidess.l. associated withTheobroma cacaoand other plants in Panamá: multilocus phylogenies distinguish host-associated pathogens from asymptomatic endophytes
2010 Standout
The origin and evolution of model organisms
2002
Application of Phylogenetic Networks in Evolutionary Studies
2005 Standout
Root of the Eukaryota Tree as Inferred from Combined Maximum Likelihood Analyses of Multiple Molecular Sequence Data
2004
The Origin and Diversification of Mitochondria
2017
The SILVA and “All-species Living Tree Project (LTP)” taxonomic frameworks
2013 Standout
Plant and Fungal Diversity in Gut Microbiota as Revealed by Molecular and Culture Investigations
2013
Clonal cultures of Histomonas meleagridis, Tetratrichomonas gallinarum and a Blastocystis sp. established through micromanipulation
2006
Mining museums for historical DNA: advances and challenges in museomics
2021 Standout
Inference of the Phylogenetic Position of Oxymonads Based on Nine Genes: Support for Metamonada and Excavata
2005
The major clades of Loasaceae: phylogenetic analysis using the plastid matK and trnL‐trnF regions
2003
Phylogenetic Analyses of Diplomonad Genes Reveal Frequent Lateral Gene Transfers Affecting Eukaryotes
2003
Bayesian relaxed clock estimation of divergence times in foraminifera
2011
A Phylogenomic Inventory of Meiotic Genes
2005
Zoonotic Potential and Molecular Epidemiology ofGiardiaSpecies and Giardiasis
2011 Standout
An Empirical Assessment of Long-Branch Attraction Artefacts in Deep Eukaryotic Phylogenomics
2005
Rooting the Eukaryote Tree by Using a Derived Gene Fusion
2002 Science
Sexually Transmitted Infections Treatment Guidelines, 2021
2021 Standout
Eukaryotic Fe-hydrogenases – old eukaryotic heritage or adaptive acquisitions?
2005
New Insights on Classification, Identification, and Clinical Relevance ofBlastocystisspp
2008 Standout
Sexually Transmitted Diseases Treatment Guidelines, 2010
2011 Standout
Occurrence, Classification, and Biological Function of Hydrogenases:  An Overview
2007 Standout
Computational Molecular Evolution
2006 Standout
The Caenorhabditis elegans ARIP-4 DNA helicase couples mitochondrial surveillance to immune, detoxification, and antiviral pathways
2022 StandoutNobel
Evaluating Support for the Current Classification of Eukaryotic Diversity
2006
Origin and Early Evolution of the Eukaryotic Cell
2021
Development of PCR Assays for Detection of Trichomonas vaginalis in Urine Specimens
2013
Genome skimming is a low-cost and robust strategy to assemble complete mitochondrial genomes from ethanol preserved specimens in biodiversity studies
2019
Phylogeny in cryptic weevils: molecules, morphology and new genera of western Palaearctic Cryptorhynchinae (Coleoptera : Curculionidae)
2008 Standout

Works of Ivan Čepička being referenced

SlowFaster, a user-friendly program for slow-fast analysis and its application on phylogeny of Blastocystis
2008
Cryptic species within the Tetratrichomonas gallinarum species complex revealed by molecular polymorphism
2004
New evolutionary lineages, unexpected diversity, and host specificity in the parabasalid genus Tetratrichomonas
2006
Organelles that illuminate the origins of Trichomonas hydrogenosomes and Giardia mitosomes
2017
Was the Mitochondrion Necessary to Start Eukaryogenesis?
2018
Critical analysis of the topology and rooting of the parabasalian 16S rRNA tree
2004
Phylogenetic position of Protoopalina intestinalis based on SSU rRNA gene sequence
2004
A wide diversity of previously undetected free‐living relatives of diplomonads isolated from marine/saline habitats
2010
Retortamonad Flagellates are Closely Related to Diplomonads—Implications for the History of Mitochondrial Function in Eukaryote Evolution
2002
The phylogenetic position of enteromonads: a challenge for the present models of diplomonad evolution
2005
Anaeramoebidae fam. nov., a Novel Lineage of Anaerobic Amoebae and Amoeboflagellates of Uncertain Phylogenetic Position
2017
Between a Pod and a Hard Test: The Deep Evolution of Amoebae
2017
Rankless by CCL
2026