Citation Impact

Citing Papers

Multiplex Genome Engineering Using CRISPR/Cas Systems
2013 StandoutScience
RNA-Guided Human Genome Engineering via Cas9
2013 StandoutScience
Sequence- and Structure-Specific RNA Processing by a CRISPR Endonuclease
2010 StandoutScienceNobel
Fusion of Cells by Flipped SNAREs
2003 StandoutScienceNobel
Protein structure determination using metagenome sequence data
2017 StandoutScienceNobel
QUAST: quality assessment tool for genome assemblies
2013 Standout
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
2012 Standout
Whole-genome resequencing reveals loci under selection during chicken domestication
2010 StandoutNature
Scaffolding as an Organizing Principle in Trans-translation
2006 StandoutNobel
Evolutionary conservation of sequence and secondary structures in CRISPR repeats
2007
Protein families and TRIBES in genome sequence space
2003
Merging cultures in the study of membrane traffic
2004 StandoutNobel
Mammalian Prion Biology
2004
KIN‐29 SIK regulates chemoreceptor gene expression via an MEF2 transcription factor and a class II HDAC
2006
Evolution of CRISPR RNA recognition and processing by Cas6 endonucleases
2013 StandoutNobel
Genomic analysis of the aromatic catabolic pathways from Pseudomonas putida KT2440
2002
Classification and evolution of type II CRISPR-Cas systems
2014 StandoutNobel
Systematic identification and annotation of human methylation marks based on bisulfite sequencing methylomes reveals distinct roles of cell type-specific hypomethylation in the regulation of cell identity genes
2015
Fundamental Cellular Processes Do Not Require Vertebrate-specific Sequences within the TATA-binding Protein
2003 StandoutNobel
High-Resolution Profiling of Histone Methylations in the Human Genome
2007 Standout
KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases
2011 Standout
CRISPR RNA maturation by trans-encoded small RNA and host factor RNase III
2011 StandoutNatureNobel
A Self‐Sufficient Peroxide‐Driven Hydroxylation Biocatalyst
2003 StandoutNobel
Integrating sequence and structural biology with DAS
2007
The NOX Family of ROS-Generating NADPH Oxidases: Physiology and Pathophysiology
2007 Standout
Ribosomal protein S1 induces a conformational change of tmRNA; more than one protein S1 per molecule of tmRNA
2002
Ferroptosis: An Iron-Dependent Form of Nonapoptotic Cell Death
2012 Standout
Hsp70 chaperones: Cellular functions and molecular mechanism
2005 Standout
Analysis of intra-genomic GC content homogeneity within prokaryotes
2010
Understanding the mechanisms and drivers of antimicrobial resistance
2015 Standout
Spliceosomal UsnRNP biogenesis, structure and function
2001
The MicroRNA miR-1 Regulates a MEF-2-Dependent Retrograde Signal at Neuromuscular Junctions
2008 StandoutNobel
RNA-guided genetic silencing systems in bacteria and archaea
2012 StandoutNatureNobel
Evolution and classification of the CRISPR–Cas systems
2011 StandoutNobel
Expansion of the BioCyc collection of pathway/genome databases to 160 genomes
2005
Hsp70 and CHIP Selectively Mediate Ubiquitination and Degradation of Hypoxia-inducible Factor (HIF)-1α but Not HIF-2α
2009 StandoutNobel
Biology and Applications of CRISPR Systems: Harnessing Nature’s Toolbox for Genome Engineering
2016 StandoutNobel
The second wave of synthetic biology: from modules to systems
2009
Crystal structure of the motor domain of a class-I myosin
2002
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored
2010 Standout
The Biology of CRISPR-Cas: Backward and Forward
2018 StandoutNobel
Assembly of the phagocyte NADPH oxidase
2004
Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified
2006
A PEST-like element in FREQUENCY determines the length of the circadian period in Neurospora crassa
2001
Antibacterial drug discovery in the resistance era
2016 StandoutNature
Genome engineering
2009
COP9 signalosome revisited: a novel mediator of protein degradation
2001
ModelFinder: fast model selection for accurate phylogenetic estimates
2017 Standout
Repurposing CRISPR as an RNA-Guided Platform for Sequence-Specific Control of Gene Expression
2013 StandoutNobel
RNA processing enables predictable programming of gene expression
2012 StandoutNobel
PDF and cAMP enhance PER stability in Drosophila clock neurons
2014 StandoutNobel
RNA-guided complex from a bacterial immune system enhances target recognition through seed sequence interactions
2011 StandoutNobel
Cross-biome metagenomic analyses of soil microbial communities and their functional attributes
2012 Standout
Disruption of Doppel prevents neurodegeneration in mice with extensive Prnp deletions
2004
Chemicals from lignin: an interplay of lignocellulose fractionation, depolymerisation, and upgrading
2018 Standout
Yeast vacuoles and membrane fusion pathways
2002
Genomes in Focus: Development and Applications of CRISPR‐Cas9 Imaging Technologies
2017 StandoutNobel
Genome sequencing and analysis of the model grass Brachypodium distachyon
2010 StandoutNature
Copper Homeostasis and Neurodegenerative Disorders (Alzheimer's, Prion, and Parkinson's Diseases and Amyotrophic Lateral Sclerosis)
2006 Standout
A Bioinformatician's Guide to Metagenomics
2008
Toward simpler and faster genome-wide mutagenesis in mice
2007 StandoutNobel
Partial Genome Assembly for a Candidate Division OP11 Single Cell from an Anoxic Spring (Zodletone Spring, Oklahoma)
2011
The Alkane Hydroxylase Gene of Burkholderia cepacia RR10 Is under Catabolite Repression Control
2001
The Chemistry and Biochemistry of Vanadium and the Biological Activities Exerted by Vanadium Compounds
2004 Standout
Visualizing tmRNA Entry into a Stalled Ribosome
2003 StandoutScienceNobel
CRISPR/Cas, the Immune System of Bacteria and Archaea
2010 StandoutScience
Gene sequence signatures revealed by mining the UniGene affiliation network
2005
4-hydroxybenzoyl coenzyme A reductase (dehydroxylating) is required for anaerobic degradation of 4-hydroxybenzoate by Rhodopseudomonas palustris and shares features with molybdenum-containing hydroxylases
1997
The Mononuclear Molybdenum Enzymes
2014 Standout
The role of natural environments in the evolution of resistance traits in pathogenic bacteria
2009
The Microbial Engines That Drive Earth's Biogeochemical Cycles
2008 StandoutScience
Origins and Evolution of Antibiotic Resistance
2010 Standout
Iron regulatory protein-1 and -2: transcriptome-wide definition of binding mRNAs and shaping of the cellular proteome by iron regulatory proteins
2011
The Ubiquitin-Proteasome Proteolytic Pathway: Destruction for the Sake of Construction
2002 StandoutNobel
Plant-Growth-Promoting Rhizobacteria
2009 Standout
Small CRISPR RNAs Guide Antiviral Defense in Prokaryotes
2008 StandoutScience
DASher: a stand-alone protein sequence client for DAS, the Distributed Annotation System
2009
Jalview Version 2—a multiple sequence alignment editor and analysis workbench
2009 Standout

Works of Ildefonso Cases being referenced

Expression systems and physiological control of promoter activity in bacteria
1998
BioLayoutJava
2005
SIREs: searching for iron-responsive elements
2010
Transcription regulation and environmental adaptation in bacteria
2003
CARGO: a web portal to integrate customized biological information
2007
NEW EMBO MEMBERS' REVIEW: The black cat/white cat principle of signal integration in bacterial promoters
2001
Promoters in the environment: transcriptional regulation in its natural context
2005
CoGenT++: an extensive and extensible data environment for computational genomics
2005
Genetically modified organisms for the environment: stories of success and failure and what we have learned from them.
2005
COmplete GENome Tracking (COGENT): a flexible data environment for computational genomics
2003
Early and late responses of TOL promoters to pathway inducers: identification of postexponential promoters in Pseudomonas putida with lacZ-tet bicistronic reporters
1993
Deconstruction of DNA Methylation Patterns During Myogenesis Reveals Specific Epigenetic Events in the Establishment of the Skeletal Muscle Lineage
2015
Rankless by CCL
2026